Array 1 216197-216386 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QRXK01000012.1 Parabacteroides distasonis strain AF18-10 AF18-10.Scaf12, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                                	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	===============================================	==============================	==================
    216197	    47	  68.1	    29	AGGT.A.G.AT..A.....A...........C....CAA.......T	CTTGGGGCGAATGGTGACGGTTGGCTTGC 	
    216273	    47	 100.0	    30	...............................................	TCTCCTACCAAGGTGATACCCCTGATCAGC	
    216350	    37	  74.5	     0	...........C...C.....................----------	|                             	Deletion [216387]
==========	======	======	======	===============================================	==============================	==================
         3	    47	  80.9	    30	GTTGTGATTTGTTTTTAAATTAGTATCTTTGATCCATTGGAAACAGC	                              	       

# Left flank :   CTCGTGGGGGATTCGTCTGGGGTTGTCGTACAAGCAAGTTCAAGAGAATGCGTCGCTTTCCGGAGTGCTCACAGTTAAGCACCTCATTTATCAGCTCATCCTGTTTATCATATAGCCATTCGTTTTCCTTGGTCGAGAAATGGCTACAGACCCATAACGCTTGATAACTAACGGCATCATCCGGATCGAATATCAGATCGTATAGCTCTGCTTTCCGTTCTTGGTTCCCTTGTACATAAAATAATATCTCATGGATATCCTCTATATGACAGCGGCTTGATAGTCTCTCTTTTAGGTCCATTCTCAATCTTTGTTGTTGTCTCTTTATCTTTTCTGCCGTAAAGTTATAGTCTTTTTAGCAAAGTTTCCTTAGTTCGCTTACTTTTGTGCCCCATTGATAAAAGAATGGATAGATATGCGATATATGAATTTATTAAATGATTTAACAATTGATTGTAAAAATAACGGAGGGTGTTACCGAGTAAAGGATCAGTTGAAGA
# Right flank :  TG

# Questionable array : NO	 Score: 3.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.05, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGATTTGTTTTTAAATTAGTATCTTTGATCCATTGGAAACAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [66.7-3.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.77,0.41   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//


Array 1 460-70 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QRXK01000045.1 Parabacteroides distasonis strain AF18-10 AF18-10.Scaf45, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                                	Spacer_Sequence                                                   	Insertion/Deletion
==========	======	======	======	===============================================	==================================================================	==================
       459	    47	 100.0	    30	...............................................	TTAATATATTTGTCAAAACTGCCATCACTC                                    	
       382	    47	 100.0	    66	...............................................	CAAACGAGAAAGATCTAAATTGAGTTTTGTGTTGTGATTTGCTTTCAAATTAGTNNNNNNNNNNGT	
       269	    47	 100.0	    29	...............................................	GTTGACAAATATACTGAAATATTGATTAT                                     	
       193	    47	 100.0	    30	...............................................	AACGCCTGTTGAAATATCACATTAGGTAAT                                    	
       116	    47	 100.0	     0	...............................................	|                                                                 	
==========	======	======	======	===============================================	==================================================================	==================
         5	    47	 100.0	    39	GTTGTGATTTGCTTTCAAATTAGTATCTTTGATCCATTGGAAACAGC	                                                                  	       

# Left flank :   TTTGCTTTCAAATTAGTATCTTTGATCCATTGGAAACAGCGCTTCGATGGCACGTTCGGCCCAAAGGT
# Right flank :  CGGAACTATAAGCTGGATACGATCCGCAAGAGTTGTGATTTGCTTTCAAATTAGTATCTTTGATCCATTG

# Questionable array : NO	 Score: 5.46
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.59, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGATTTGCTTTCAAATTAGTATCTTTGATCCATTGGAAACAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-2.90,-3.10] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//