Array 1 180660-180810 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJDY01000002.1 Lactiplantibacillus mudanjiangensis strain 11050 contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 180660 29 100.0 32 ............................. ATGGGTCAATGTCAATGTCGCTGGGGTTATAC 180721 29 100.0 32 ............................. GAAGAACAGATCAAACTAAGCGAGCTACTTGA 180782 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GTATTCCCCACGCATGTAGGGATGATCCT # Left flank : TTTCAACTCGGCTTTGTCCAGGCTTTGCTCGGAGTTGGTTACACGTTGACCTTAAATATCCACAAATTGCCACAAATTAATTGGTTAGCTGCAGCGGGGCCAGTAGTGTACTTAGGCGTTGTCGCGACGTTTGCGGCACAGGTGTTGCAGATGATCAGTCAACGCTATACGGATACGGTAACGGCGGGGCTTATTTTGATAACAGAATCACTGTTTGCCAGTTTGATTTCAGTCTTATTTCAAGTTGAAAGGCCAACATTGCATTTGGTCATTGGTGGCAGTTTAGTGATTTTGGCGACGGTTATTACGCAGTTTGATTTGCGTGGCGTTTTCGCGCGATATTTAGTCAAGGGGCACCGATTTAAAGTATAGATTGTACTGGAAAATATGGTATCCTAATTTTAGGGTGAATTGTTGAGCGTTGAACGAACCGAGTTCAAAGTGATGTAAATTGGACTTTTTCGAAAATTGAAATGCCGGTGTAGCGGCGTTTGTTTAGT # Right flank : CATAATTGAATACTTTCTTTCGTTATACATTAATAGCGTATATAAAAAAGACCGGAATTTCGGTCTTCTTTAGTATCTGTGATTTTCCAAGTAGCGTCTGTGCAAGATTTAAATACATACACTTAGTCCTTAATCGGGTAGTAGGCATATTGAGTTGTTTTTATTCATTATTGTAGCTGACTGTCGAGTTTCAACAAGTTATATATTTAATATACTATGCTAAAACTGTATCGTTGTCGGGATCATTGGTTACTAATTCATTAACATTGGTTATTAGTGTATCCAGCTCATCCAAGTCGTCGTCACATGTTCTACCTAAAAAGTCTGAGCCAAGATCCATACACTGTTTGTCAAAGCTTGTCATGGTTATAGTGTAAGTGGTCAGGCATATCTATTAAGACATCCCTAGGCCGGTTTACCATTTGAGTCAGCGGCTGTAAATTTAACAACCATGTTGTATGGAGCGTCACTGCTACGGTCTCTAATGACATGGGCTAAGT # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCATGTAGGGATGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,1.01 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 2 196735-197129 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJDY01000002.1 Lactiplantibacillus mudanjiangensis strain 11050 contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 196735 29 100.0 32 ............................. GGCCGGCATGATTTTAACGGCAAACTGCCGCC 196796 29 96.6 32 ............................T ACACGTACCGGGTTCACCGGTGTCCGTGCTTG 196857 29 100.0 32 ............................. TGGCACGGCCTAAGCGTTGATGGTAGCCACGA 196918 29 100.0 32 ............................. AGCAATTCCCATATCAGGATTACCATCAAAAA 196979 29 93.1 32 ............T...............T TGGGCGATGCTTGATTGTGTTATTAAGCATGA 197040 29 93.1 32 ............T.C.............. GAACAGAAATTTTTGCCAATAGATTCACACTA 197101 29 93.1 0 A......T..................... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 96.6 32 GTATTCCCCACGCATGTAGGGATGATCCC # Left flank : ACCCACATGAATTAAATATTGTGGCTACGTTTAACTTAATCAATAGTCCGGCTATGATGATTGAGCGTGGCATGGGCTATGCGTTTACATTCAGTCATTTAATTAATACGACCGGCAACCCTAATCTTTGTTTTCGACCATTGATGCCAAAGGTGGAAACCAGCCTTTATTTGGTATGGAAAAAGTATCAAGTTATGACACCGGCCAACAATCTTTTTTTGAAGCAATTACGTCATCAATTGACTTTCTAAAATAATATAACAATCTTAATTGCTTATAGGTAGTAGAGGATAGGTACGGAAAAGTGGGGACTTGCAAAATGCGACCCACAGAATTGATAGTTGGACAACCGGTAAAAATTTATTTGACGGATCTAGGTAATAGATAAAGCTGCATAGGTATCTTATACTAGATACATTAGGACGATTGTTTGGATGCAAAGTGATGTAATTTCGACTTTTTTGAAAAATAGAATGCTGGTATAACGGCGTTTGTTTAGT # Right flank : CATTTTAAGAAGCCCTAACTACTATGCTGCCACGCCACACACGTATGGGTTGAATTAAAGATAAAACAGCATGTTTAAAATTAAGTCTTGAGGACTAAGAAATAAGCACAACAGTTCTGAAAACATCAATTATAAATTAAAAAATAGTGATTTCTTCATCAGTAAGAAGAAGTCACTATTTTTGCTGCCTAATTACAATTTAGCTAGTTTATATTTTATAATCCCGGTTCAATCAACTGCCAAGTTCGTTCAAATCGATCTTGATAATCATCATCTAGCCAAGTTTCTTTAAATGTCGGTAACATAAAAATGGCAAATGCGGCGATAACGGCTTCGGCGCGTTCATAATGTGCGTCGTGATAAGCCAATAAAATATCGACATTTTGATAGGCTGGTTGTAAAACCCGTCGCAAGGCAGCCGGATTATTATCGAGATACTGGGTATTGAGCGCAAACATTTGGGGATTATTTTGGTAAGTACGTTTTTTGGCATTTACTAA # Questionable array : NO Score: 5.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCATGTAGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //