Array 1 123-3031 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMYB01000015.1 Oceanisphaera arctica strain KCTC 23013 sequence15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 123 28 100.0 32 ............................ TGGCTCCCCGAATATTGTTGCCTGCACCGGGC 183 28 100.0 32 ............................ GCTAGTAGGCCCACTTATCGCCGGGGTGATAG 243 28 100.0 32 ............................ TAATAAAGCCGCACACATCTACGTCGTCAATC 303 28 100.0 32 ............................ AGTGAGGTCTTACCCAAGCCTGGCTCCCCGAA 363 28 100.0 32 ............................ CATCGCCGCCAGTACGGGTAAAGGGTCATGGT 423 28 100.0 32 ............................ TACTTGATAACCGCGCTGATAATCGGCGCAGT 483 28 100.0 32 ............................ ATCATGTGCGGCGCGGTTTGCGGCTTCTCAGC 543 28 100.0 32 ............................ TTTAAATAGTTTTCTGGCAGGCGGCGCATAGA 603 28 100.0 32 ............................ GTTACCGTCTACCCGCTCGAAGCGGGATCCGA 663 28 100.0 32 ............................ TACTTGCAGACCATCAGCTTCGAGGCCGTAGT 723 28 100.0 32 ............................ AGCTATGCCCACTGCAACCACGGTTACAGCTA 783 28 100.0 32 ............................ CTGTGATGGCTGGTGCATTCCATGGCTAATCC 843 28 100.0 32 ............................ TCATCAAATTTCTTGATAAAGTTCCAAAATGA 903 28 100.0 32 ............................ GACAAACAATCCAAAGAGGATCTGTTAATTAA 963 28 100.0 32 ............................ ATCCGCTCGGCCCAGCCGGTAGGGCCGCACCA 1023 28 100.0 32 ............................ AGTTGCGCGGTGCCCTGGTCGCCGAGGCTAAC 1083 28 100.0 32 ............................ GTTCATGCGGTGCGCTGCAAGATGGGCTATTA 1143 28 100.0 32 ............................ ATTCTGACGTTGCCCAATATTAACGGCCACTT 1203 28 100.0 32 ............................ TACCGCATCCACAAGCCAGCGCAAGAGCAACC 1263 28 100.0 32 ............................ TCGCATATCGCCGTTGGGTGAAAAAGCCTCCA 1323 28 100.0 32 ............................ CGCATGGTGGGCACCACCGTATTGCCGTTGGG 1383 28 100.0 32 ............................ TTCCAGTTAGATCGTGGTGCCTTGCTCATGCG 1443 28 100.0 32 ............................ AAACACCCGCTTTACCTGACCGAGGCCGACGA 1503 28 100.0 32 ............................ AGTCACAGAACCCCGGCAACTCAAATGGTTCA 1563 28 100.0 32 ............................ GCTCATGTGGTGCCGTGCTATGGTAAACCTGA 1623 28 100.0 32 ............................ TTTGTTTTATCGTCTTGCTTTGAACGGATTGG 1683 28 100.0 32 ............................ TGTCTTGGATGGCACAGCGTTAGCGTCATGAT 1743 28 100.0 32 ............................ CTCACCAGTATCCGTTCCCAGCTGTCCGGTGC 1803 28 100.0 32 ............................ AACGGCTTCAAACTGAAAGAACAGCCAGATGG 1863 28 100.0 32 ............................ ATGCAGTCGGTGAGCAGCACCGCCACCAGCGG 1923 28 100.0 32 ............................ ATGCAGTCGGTGAGCAGCACCGCCACCAGCGG 1983 28 100.0 32 ............................ TTGATTATTGTCGCGACCCTGATCATTTTTGG 2043 28 100.0 32 ............................ CACTACTGTGATGTTTAGGCTCTTGGCTCCGA 2103 28 100.0 32 ............................ AAGGTGTGAATGTGAGCGGGAGAGGGCTTGCC 2163 28 100.0 32 ............................ CTTCACAAGGAAACCCCATGAGCAAAGACAGC 2223 28 100.0 32 ............................ TCACCATTGCCCGGGGCGACGTATGCAAGGGT 2283 28 100.0 32 ............................ TCACCATTGCCCGGGGCGACGTATGCAAGGGT 2343 28 100.0 32 ............................ GCTCTGGCTGGTGCGTGTGTCGGGGTCTTGCC 2403 28 100.0 33 ............................ GGTGACGATTAACCCATACTCTTTGCCCGTCTC 2464 28 100.0 32 ............................ ATGGCCTCCAGGTAATCGAAAATCTCCCGCTG 2524 28 100.0 32 ............................ GGCCGGGCCCAGTAGAAATAGTCCTTGCCGGT 2584 28 100.0 32 ............................ GGTTTCCCCGGCCCATTGACGGCGGGCGTATA 2644 28 100.0 32 ............................ AACCACAACGGTTACGACTAATCCTGACGGCA 2704 28 100.0 32 ............................ GGGCACATTGTAGTGTTTCGTGATGGCGACAA 2764 28 100.0 32 ............................ ATATAAAAGCTCTGAAATTATCAGAGCTTTAA 2824 28 100.0 32 ............................ TACAGTACGCCCTGACCATGAACGACCCCAAA 2884 28 100.0 32 ............................ AACAACATTTACCGGCAGTGAACGGATTTCCA 2944 28 96.4 32 .............T.............. GTCACCCGGGGGTCAACCCCAGCAAACCGCTC 3004 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 49 28 99.9 32 GTTCACCGCCACCCAGGCGGCTTAGAAA # Left flank : GAAACACCGCTGATCGTCAATCTTCAATCACCGCAACAGACCATTCTTACAGCACTCGGTGATCGCTATCAGGCCATTTATTCCTGAATTAGGTGCGGAATGTCGGGCCGAAAGTTGGTTTAG # Right flank : AACCCCAGAAGGCCCATGTGTTGCTGCGCAACACCGGCCGACTGAAGTGGCCGCTACCGGGCTCGGTGTTGGTTTTTAACTGACAGCTCAAGCTTACGACTTTCGCTTTATTTAGTTACACCGCCGGGTTCGGCATCTGCAGGTGCAGCTCTTCTATGGCCTCCAGCAGTTCCGGGCTTAGTGTGAGGTTCACGCTGTCGATGTTCTCTTTCAGCTGGGTCAGGTTGGTGGCACCAATCAGGTTACTGGTCACGAAGGGGCGGCTGTTTACAAAAGCCTGGGCCAGCTGTGCCGGGCTGATGTTGTGCTCCCGGGCCAGGGCCACGTAGGCGGCGCTTGCCTGTTGGGCGCGGGGGTTGAGGTAGCGCTGAAAACGGTTGTACAGGGTCAGACGGGCGCCGGCGGGGCGGGCGTTGTTTTCATATTTGCCGGTCAGCATGCCGAAGGCCAGCGGAGAATACGCCAGCAGGCCCACTTGCTCGCGCAGGCTGAATTCGGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCACCCAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCACACAGGCGGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 138542-140429 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMYB01000010.1 Oceanisphaera arctica strain KCTC 23013 sequence10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 138542 28 100.0 32 ............................ TCATTCACGAAATCGACCCGGCCAACATGATC 138602 28 100.0 32 ............................ ACTCACCGGCTGCTGCGCAAATGCTCGGTCAA 138662 28 100.0 32 ............................ CACATCACCAATACGACCAGCCACAGGCCAGC 138722 28 100.0 32 ............................ ATGAAGCTGACCTACTACAAGCGCGAAATCGA 138782 28 100.0 32 ............................ GGTACCAGAGAACAGCGAATACATGCGATTGA 138842 28 100.0 32 ............................ AAACCAGGCACCAAGCCAGGCACCGTTCACTA 138902 28 100.0 32 ............................ AGTAGCCGCCGGCTGGTTGATAGCTTGCTGAG 138962 28 100.0 32 ............................ CGGTGCAGGTGGGCCTTGTCGTGGTGCAGCAC 139022 28 100.0 32 ............................ ATCAAGCAAACCCTGGCAAGAAGGAAACGAGA 139082 28 100.0 32 ............................ AGGCTTCGGCGGTTTCGCGAATGTGGCGCAGG 139142 28 100.0 32 ............................ GCGCTTGCTGCCGGACCCGTCGATGTAGGGAC 139202 28 100.0 32 ............................ CAGCTGGGCGTGGTTCGGCCATTTGTTGAGGT 139262 28 100.0 32 ............................ TCCAACGCGGTGAACAGCCTGCGCGAGCTGAG 139322 28 100.0 32 ............................ GTTTACATTGTGCCGATGATGTGTCGCGAGCA 139382 28 100.0 32 ............................ GTCATGCGCTGGCTGATTTCTTCCACCCAGGC 139442 28 100.0 32 ............................ TCCACCGCCTCCGTGCTGCCGGTCACCACGCA 139502 28 100.0 32 ............................ TGAATAGCGGTCGCCGTGTTCGCGTCGTCCAC 139562 28 100.0 32 ............................ GATGCCGTAAAAGTATTGTCAGCCGTTGATCC 139622 28 100.0 32 ............................ AACAGAAGCAAGATATGATTGGGGTATCAGAT 139682 28 100.0 32 ............................ GCCGCAAAGCGAGCCATTGCCGTAGCTGAGAA 139742 28 100.0 32 ............................ AAGTGGATTGGGAGCTTGAAAAAGCGGGAGCA 139802 28 100.0 32 ............................ GTTTGCCAAATGGCTTGCATCTTTAAATAAAA 139862 28 100.0 32 ............................ GATATATAGGCGGGAATAACACGCGACCACAA 139922 28 100.0 32 ............................ GCTAATATACATTCTTTATTACCGCCCAATAT 139982 28 100.0 32 ............................ TCTTTCGCCAGCTTGTTTTTATTGATCCCGTT 140042 28 100.0 32 ............................ TTTTCGACAGCTGAGAGCTGCGGGGCGGAATC 140102 28 100.0 32 ............................ CCTCGTGCGAGTGGTGTGTCTGTGGCGTTCCA 140162 28 100.0 32 ............................ GGTCTAGGCGATGAGGGATACCGCAGCCGATA 140222 28 100.0 32 ............................ ACCAACGTCAGCGTATACAAGGCGGGTATGTT 140282 28 100.0 32 ............................ ACGCAACTTACCCAGCGGTGTGAGTACTATTT 140342 28 100.0 32 ............................ ATGATTGAAGGTGCGGAGCTGAGCGAGTATCA 140402 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 32 28 100.0 32 GTTCACCGCCACCCAGGCGGCTTAGAAA # Left flank : ACCCATCTTAAGTCGATTCAGCCGGTGCCGGAGTCGGTAACTCATATCGCGTTTGTTCGCAAACGGGTAAAAGGCGAAGCCCGTATCGAAAAAGATATGCTTGCCAAAGCTCAGCGTTGGGCAGAAAAGTCGGGGCAAACTATGGAGGAGTGCTTGCAACAGCTGGAAAAAAGCAAACCGAGTGCCGAGTCCAAGTTGCCTTTTATCTGGATGGAAAGCCAGGAAACCAAAACGCGAGCTCCCTCAAGTTCCGCCAAGTTTCCGATTTTTATTGAACGGATAGAGTTGCAAGGGGCAAACGATGGACGTTTTAACTGCTACGGCTTAAGCGCAGTACAAGGCGAGCAAATCGCTTCGGTACCGCACTTTTGACCTAAAAAATGGCTCTTTAAAAATATGCTTTAAAAACAGATGGTTACAGTGTTGGTGAAAATAAGAGTATTTCTTCATATTCTTATCCAAGCCTTTGTTGTAACTATTTTTTGTGTTAGTTTTCTACT # Right flank : AAACTCGAATGGACGCGCCGAACCGTCATTCCGCACCTGATTTTCTGATTTCCGGTGCTTGACACCGAACCGCCAGTTTGATCTATTACTACTTTTTGGCGGCAGCAGCATGGCAACTCCTTCTTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCACCCAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCACACAGGCGGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //