Array 1 4218-3145 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWKJ01000943.1 Streptomyces sp. SID1034 SID1034.c1013, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================= ================== 4217 33 100.0 29 ................................. ATTTGGGAGTCGGGGGCGCGGTCCTCGCG 4155 33 87.9 28 .............A...............C.GT CCCGCAACCTGCTTGATTTCGCCCGCGC 4094 33 90.9 27 .............A................G.G CGACCCCGAGGCCGTCGCCCTGCTGTC G [4066] 4033 33 93.9 27 ............................TT... GGTAGGACGTCCCGGCCGGGGGACCAG 3973 32 93.9 24 .................-............C.. CCGGACAGGGCCGAGGCCAGCATC TGGC [3942] 3913 33 84.8 28 ............A................CCTC CGTGGCCCGGAGCGTGCGCGACTGCGGG 3852 33 90.9 28 .............A..T............T... CCGCGACGGTCGGCAAGTACGTCCGCGA 3791 33 87.9 28 ...........C.A................AG. CCGGGCATGTGGGCATCGAGGTCACCTC 3730 33 81.8 28 .............AT..............TCGG CTGACCTGTTCGACGTGCTCACACTGGG 3669 33 84.8 28 .............T...T...A........C.T GGGCATCCCCGAGCCCGGCCCGGACGGG AG [3654] 3606 33 84.8 28 ......G......A...............GGA. TCGCGGCAGTAATCGCGGTCATCGCGGT 3545 33 87.9 28 .............A...............CC.C GGGGTCGGGTGCGCGATCACCGGAATGC C [3536] 3483 33 93.9 26 ..............T................G. CGTTCCGCAACTCGATCCTCGCTGCG AC [3453] 3422 33 90.9 28 ........................C....G..G GGTCCGGCAAGTCGGCCGGCTACCGGAT 3361 33 90.9 28 ..A...........T.................C GGGCTATCCCGTCCGTCCCGCGCCCCTC T [3356] 3299 33 87.9 28 ..............T...............GGT TGGGTCGGTATTCGACCAGCAGGTCGTG 3238 33 84.8 28 .............A...............GCGG CGGCATGACCGACGCCGACCGAGAGCGC 3177 33 81.8 0 ........G...AA.T.............C.G. | ========== ====== ====== ====== ================================= ============================= ================== 18 33 88.9 28 GTCCTCCCCGCTGCCGCGGGGGTGTTCCGATCA # Left flank : | # Right flank : ACTTCGTCCCGGGGGACACGCTCAACCTCGGACGCGAACAACGATGCGGGCCAACGGAGTTCGTAATTGCTCAGATCCAGACTCACCACGTCATCATCACCCACGCGGACAGGCAAGCCGCCTCAGTTGCGGCGTGAGACCGGGCTGAGCGATGAGCAGATCAGGGCGGGGGTGGACCGAAACAACGCGCACGCACTGCGGCCCGGCTCCGGTGGAGCCGGGCCATAGGGGCTTCGGGGCGGGTTCTAGTCGTCGCGGCCGGGGCCGATGTAGACGATGCGCAGGCCGGTGCGGTCGTAGGCCTGGGGCGTGGTGGTGAGGATCGCGGAGCCTGCTGGGGTGTGGGGCGAGGCGCTGGCGGCGTGTACGGCGTGGGCGTACTGCCAGGGCAGGCCGTCGGCGGCGAGCTGCTCGACGGCTACGGCTGTGGGGAAGTCGAGCGGGAGGAAGTCGAGGCCTGGCAGGGCGCCGACGTGGGCGGTGAAGAGCGGGCCTGGTTC # Questionable array : NO Score: 3.28 # Score Detail : 1:0, 2:3, 3:0, 4:0.45, 5:-1.5, 6:0.25, 7:-0.04, 8:1, 9:0.12, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCTGCCGCGGGGGTGTTCCGATCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-13.10,-12.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [13-13] Score: 0/0.41 # AT richness analysis in flanks prediction: F [35.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 213-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWKJ01000348.1 Streptomyces sp. SID1034 SID1034.c374, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 212 29 100.0 32 ............................. TTCGTCCTGTACGACCCGGGCGCGATCACTCC 151 29 100.0 32 ............................. GTGGCGGTGGCCGGCTGGGAGCTGATCGTTTT 90 29 96.6 32 .......................A..... CCGCTGCTGCGGTCCGTGTCCAGCGTCGGACG 29 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 99.2 32 GTCCTCCCCGCTGCCGCGGGGGTGTTCCG # Left flank : GC # Right flank : G # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCTGCCGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGCCGCGGGGGTGTTCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-13.10,-12.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3-214 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWKJ01000387.1 Streptomyces sp. SID1034 SID1034.c414, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 ............................. AGGTCGGCGACGTCCACACCTCACCGCCCTTC 64 29 100.0 32 ............................. TGGGACGGGTTCCGCGCGCAGCTCGCCGTGCA 125 29 100.0 32 ............................. GGTCAGAGGAGGGCGTTGGAGAGCACGGCAGG 186 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 100.0 32 GTCCTCCCCGCTGCCGCGGGGGTGTTCCG # Left flank : CCG # Right flank : A # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCTGCCGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGCCGCGGGGGTGTTCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.90,-13.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1-464 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWKJ01000032.1 Streptomyces sp. SID1034 SID1034.c32, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1 30 100.0 31 .............................. GTGAGCACGACTGGGTTCCGTGGAGTGGTCA 62 30 93.3 31 .......T.....................G TCGCGTCCCGCTGGGAGAGTTGCGAGTCCTT 123 30 96.7 31 ...................A.......... CCGTGCCGAGGCAGGCACCGAGGAGACCCGC 184 30 100.0 31 .............................. GACTCAGCCTGTAGATACGGAAGCTGGCTTC 245 30 100.0 38 .............................. CCGGGTTGTCACCGGGCGGCGGTAGAGCCAGAGAGCGA 313 30 83.3 31 .......T...A.G...C...........A GTTCGTTCTGTACGGCCTGATCGGTTGCCGG 374 30 83.3 31 ...........A.GT......T.......C GTAACACCTCAGAAAGGGCCCGCACAACCCC 435 30 90.0 0 ..............T........A.....G | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 93.3 32 CTGCTCCCCGCGCACGCGGGGATGGACCCT # Left flank : | # Right flank : GGCGGGCTGCCGACACCGCTATGTGCACCACATATCAGTGGCTATCATTGATGTCATGGCTGTGATGACTCTGCGTATCCCGGATGATCTGGACCCCTCGATCCGCGCCGGCGCCGAAGCGGCAGGTATGTCCCTCAATGCGTACATTGTGCGCGCTGCTCGGCGTCAGGCCGTGCTTGACGCCGCCGAGCAGCTCGCCAGGCTGGGACTGGGCAGCGACTTGGCAGGCGAAGGCGACACTCTGTGAAGCGCGGAGAGATCTGGACGCTCGAAGATGGTCGTGACGTGCTCGTCGTCTCACTCGACGGCCTGGAGGTGGCGTTCGGCGCGGTCCTCGCCATCGCGTTGCACCCCTCCGGACGTTACCCGGACACGGCTATGTCCGTAGTGATCGGCGACCCGCTGCCCTGCACGGCGGTCGCCGTCAACCTTCAGCAGCTCCGGGCAACGCGCTTCGACAGCGCCAAGCTCCGTGGCAGCGTTGACCCATCGGTCATGAA # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1205-1661 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWKJ01000032.1 Streptomyces sp. SID1034 SID1034.c32, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1205 30 100.0 31 .............................. CGGCCCGCACCGACGTGGTGCGGCGTATCCG 1266 30 100.0 31 .............................. TCGCCAAGTGGTTCCCCGACACCCCTGACGA 1327 30 96.7 31 .............................T CGCGGCAGACCCGGATCGAGGTCCTGACGCT 1388 30 96.7 31 .............................A CCCACTTCTGCCTTGGCACCCCCGAAACGAA 1449 30 96.7 31 .............................T CCCGGGCCAGGGAATCCCGGTGGCTGGTGAG 1510 30 90.0 31 .....G.....G.A................ TGGCGCCGCGCTTCCACATCGACCGCGACGA 1571 30 90.0 31 .......T...G.A................ GGTCTGTTGCCTCGGGGGCCCGCGATCTTCG 1632 30 90.0 0 ...........G.A...............A | ========== ====== ====== ====== ============================== =============================== ================== 8 30 95.0 31 CTGCTCCCCGCACGCGCGGGGATGGACCCC # Left flank : CTGTGAAGCGCGGAGAGATCTGGACGCTCGAAGATGGTCGTGACGTGCTCGTCGTCTCACTCGACGGCCTGGAGGTGGCGTTCGGCGCGGTCCTCGCCATCGCGTTGCACCCCTCCGGACGTTACCCGGACACGGCTATGTCCGTAGTGATCGGCGACCCGCTGCCCTGCACGGCGGTCGCCGTCAACCTTCAGCAGCTCCGGGCAACGCGCTTCGACAGCGCCAAGCTCCGTGGCAGCGTTGACCCATCGGTCATGAACCGCGTCAGCCAAGCGCTGCGAGCAGTACTCGACCTATAGCCCTAGTAGGCCTGGTCATCGGTCACACTCGACGCTCGTCTGCGGGCACATGGCCGGACGGGCGAGTCCAGAGAGGCAACCTGTGGACCATATTGAAGGGCACGACGAGAAAGGCCTTTTGCCGGATTGTGCCCTTTGCCGGTTTCGAAGGAAGTGCTGACTTTTGTGGTTGCCGCTCGGTAGAGTCGCAGGTCACGGAGC # Right flank : | # Questionable array : NO Score: 5.48 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGTGCGCGGGGATGGACCCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 255-116 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWKJ01000687.1 Streptomyces sp. SID1034 SID1034.c738, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =============================== ================== 254 26 96.2 31 ....................A..... ACCACGGTGCGAAGCCAACATCGAGTTTTGG 197 26 100.0 30 .......................... GGCACGGTCCGCAGCCGTGAGCGGAGTTGG 141 26 96.2 0 .......G.................. | ========== ====== ====== ====== ========================== =============================== ================== 3 26 97.5 31 GGGCGCGAGGAACTGCGCGACAAGCG # Left flank : | # Right flank : GGACACGGTGCGCGCCCGAACCACCGGGCCCGGGGCGCAGCCCCGAAAGCTCTCCCGGGGCGCAGCTCCGAAAGCTCTTCCGGCCCTCCCCACCCCCGGAGGGTTGCGGGAAGGGG # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGCGCGAGGAACTGCGCGACAAGCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [20.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //