Array 1 197012-200092 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWJA01000005.1 Klebsiella pneumoniae strain VRCO0062, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 197012 29 100.0 32 ............................. TTGACCTCGCCGCTTCCGGCGTCGCCTACAAA 197073 29 100.0 33 ............................. TGCATCAGGAGTGTTGGATACTCAATTCCAGGC 197135 29 100.0 32 ............................. CCTACAGTCACAGCAGGCGGCCAGCACGTGGG 197196 29 100.0 32 ............................. CTCCGGGCGAATTTCGCGCCCGTCTACCGTCG 197257 29 100.0 32 ............................. TCGGAGATCAGCACCGACCACCACAACACCCC 197318 29 100.0 32 ............................. CACCACCATCATTAACCCCTGAAGAAGTGGGA 197379 29 100.0 32 ............................. TGTTACTAACCCTTCATGTGTGATACTTTCTA 197440 29 100.0 32 ............................. ATTTCTTCACCTGCATAGAGCAGTTGCGCCAT 197501 29 100.0 32 ............................. GCACCGTGGCCGCTGGCGACGATTACAGGATA 197562 29 100.0 32 ............................. TAGAGAATGCAGCCCGCGTGAGATCCATTGTC 197623 29 100.0 32 ............................. TGACGACACCTGACTGGTGCAGCGCCCGGTCA 197684 29 100.0 32 ............................. GGCAAGACGCGCAAAAAGAAAAATCATTTCAG 197745 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 197806 29 100.0 32 ............................. TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 197867 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 197928 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 197989 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 198050 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 198111 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 198172 29 100.0 32 ............................. TTTCTGCAAATCGAGTTGCCAGCGCGCCACGC 198233 29 100.0 32 ............................. GTGGAAATCAATTTTTGTTTTGGCCAGCGCGC 198294 29 100.0 32 ............................. GCCTCCTCCCGTTACACGGACGGCATTGACCC 198355 29 100.0 32 ............................. AGATTGAGCCATATCTATCACCGCCTTCGCCA 198416 29 100.0 32 ............................. ACCGGGCATTAAATTTGGTCTTCTCGTCCACG 198477 29 100.0 32 ............................. GCTGGCCGGAGTGTCGGTCATCGCCAGCCCCA 198538 29 100.0 32 ............................. AACAAACCGATCGCTCGATCAATCGCGTTAAA 198599 29 100.0 32 ............................. ATAATACTGTATACATAAACAGTATTTGAGGG 198660 29 100.0 32 ............................. TGCTGCGCAGACAATGGTCGCTATTTTGAAAC 198721 29 100.0 32 ............................. CCGGGCGATCATGTCCGCACAGTCAAACGCTC 198782 29 100.0 32 ............................. ATGAGTTCGTTCTGCCTGATAACACCCGCCGC 198843 29 100.0 32 ............................. TATACCGGCAATCACTGACGTCAACTCAGAAG 198904 29 100.0 32 ............................. GTACCGAGGTCAATGACGCTAACGGCCTGCAC 198965 29 100.0 32 ............................. CGCGCGCGCTGATCCTGGAGGGATACCGGGAC 199026 29 100.0 32 ............................. CTGAGTTCGTGACGTTTACCTGCGGGGAAGAC 199087 29 100.0 32 ............................. ATCCAGAGCTGACGGCATTCACGTTTGACGGC 199148 29 100.0 32 ............................. AGCCGATGCCTACAGTCACAGCAGGCGGCCAG 199209 29 100.0 33 ............................. TGTATTTCTCGGTATCCGTGGAGCGGTTGCCCC 199271 29 100.0 32 ............................. GCGAACATCCCCGTATAGGTGCCGTCTCCGGT 199332 29 96.6 32 A............................ GAGCTGGCGGTGTTTTTCTGTCAGTAGACGAT 199393 29 100.0 32 ............................. CGCTCTTCTGGTTGATGTGGCATGCCTTATAG 199454 29 100.0 32 ............................. CTCAGCCTTCACCTGCTCTTCCAGTTGAGCCA 199515 29 100.0 32 ............................. ATATTGAGGGGGTCTAGCGAGACGTCTAAGTC 199576 29 100.0 32 ............................. CCTGACGAAGACTTCGTTCGCCTCATGCAAGG 199637 29 100.0 32 ............................. CCACTCAAAAAAGGTCGAAGCCAAAAGGTTAT 199698 29 100.0 32 ............................. GGGAGCTTTCATTTGATCAGGCATTTGAGCAG 199759 29 96.6 32 ..............T.............. AGCGGCCGTTACGTAACTTTTCACGTAACAGC 199820 29 100.0 32 ............................. ACACGTCGTTAGGTGTTCCGTACTGGGAGAAA 199881 29 100.0 32 ............................. CCAGGCGACCGTATCTGGGTGCGTGAAACGTG 199942 29 100.0 32 ............................. CCGCAAGCCGTATCAACGAATTACTGCTCGAA 200003 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 200064 29 79.3 0 ...........ATTC..........G..C | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //