Array 1 190228-191795 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQNK01000002.1 Corynebacterium bovis strain F6900 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 190228 29 93.1 32 .......TT.................... GGGTGTCTGGGCGTGGGGTCGTTCCGGTACAT 190289 29 96.6 32 ............................G GCCCGCGCCATGCACGACGACACGACCACCCT 190350 29 100.0 32 ............................. GGCCGCAGCGTGTACGGCAAGGCAGCGGCCCC 190411 29 100.0 32 ............................. CACCACCTCCGCCTCGCCGCCAACGTCCTCGC 190472 29 96.6 33 ............................G TGAGCGGTATGCAAAATTTTCAACTCATTGAAC 190534 29 96.6 33 ............................T CGGCAGACACACAGCCGCCAGTAGCGACGTCAC 190596 29 100.0 32 ............................. TGAGCGATGTGTTGAGCGATCCCCCGCCCTCG 190657 29 100.0 32 ............................. CGACCATTGCGCCCACGCTGTAGTACTGCTGG 190718 29 100.0 33 ............................. CAATGAGCACTATCAACCCTGCCGATGTCTTCC 190780 29 100.0 32 ............................. ATGGCCCGCCGGTCGCTGAAGGGGTCGGACTA 190841 29 96.6 32 ............................G TGTGGGGAGTGTGTGTGGGGGTTACCGGTTGA 190902 29 100.0 33 ............................. GCTATGGAGGTTGTGACGTGCCGTGTTCTGAGC 190964 29 96.6 33 ............................G GTCGCGATGAGAGTCAGCGCCCTGCAAGGTGAC 191026 29 96.6 32 ............................G CTGGAGGAGGCGCTCACCGACCCCGACACGAT 191087 29 96.6 32 ............................G ACCGTATCGCCCGCCGGTGGCAGGCGTAGCCC 191148 29 100.0 32 ............................. GCCGACCACGACCGGAACGCCCCGTTGACGTC 191209 29 100.0 32 ............................. GCGACTACGCCCTCCTTGAACTCACAGACCAC 191270 29 96.6 32 ............................G GGCGCTCGACCGAAGTTCCAGGAGTGGTCGAA 191331 29 100.0 32 ............................. TGGAACAGCCCATACGCCCCGGACGAGGGATT 191392 29 96.6 32 ............................G GGGTCCACTACCAGCCACTCAGGGGGACACTT 191453 29 96.6 32 ............................G CATTTCCATCGTGTCGGTGAACTGCTGCCCCT 191514 29 100.0 32 ............................. CTCAACCACGGCGGCCCGGACGTCCCAGTCGC 191575 29 96.6 32 ............................A GAGCGCCCGGACTTGTTTGGTGAGCGTCGGAG 191636 29 96.6 41 ............................G CGGGGATGATCCGGAGAGGACACGCTAGACTGCAGAAGCTG 191706 29 93.1 32 ............C...............G CGTCACGCTTGGACGACTTTGATCCGGCATGT 191767 28 86.2 0 ...........-...........AG...G | C [191782] ========== ====== ====== ====== ============================= ========================================= ================== 26 29 97.4 33 GTGCTCCCCGCGTGAGCGGGGATGATCCC # Left flank : ACACCCGAGGACGGGGCCGACGAGGTTCCCGGCGGCCCTTCTCGACGGGAGGCCCCGTGATCACCGTGGTATTGACGTCTCCTCCGGAGCGGGTGCGTGGTCACCTCACGCGATGGCTCTCGGAAGTGGCGACCGGAGTGTATGTCGGCAAGGTGAGTGCCCGCGTGCGGGACGAGTTGTGGCAGATGATCCAGGTGAACATGGACGGCGGTCGGGCGGTGATGACGTACCCGACCACCACCTGTGAGCAGGGGTACGCCGTGAAGGTTCACAAACCGCAGTGGGAACCGGTTGATGTCGAGGGGCTGGTCCTGTTTCGTCGGCCGGGCCGTGACCGGACCTCGCGGACCCGCGGCGAGTGGTCACGGGCCTCGCGGGAGCGTGGAGGCAGGACCAGGCGAGCGGATGGCCCGCACTGATGGCAGGTACAGACGTGAAGGGGCTGATCGACATCGAATGAAATCTGGCTTCTCGTGTACTAACATCCCTGGTCAGGAAGT # Right flank : GCCGCGGCCGTCACCAGCAGCGCGGCCGCCACCACGACCGCTCACCCTCCTTGCGCCGCCCGTCTCGCGCCGCTTGCGCCGGCCCCGGCTCGCGCCAGCCCCGCTCGCGCCAGCGCGGCACCCGCCAGCCCGGCACCCACCCGCCCACCCACCTCCCGTCGTGTTCGCCCGTCCGCCGACCGCAGGTCTAAGGTGAATCCGTGGCCACGCGAACGACGACGAAGAATGCCGCGCCCGGGTCAACCCGGCGCCGGCGGGGCTGGCGAGCGTTCCTCACGCCGGGCTGGGTCATCACCGCCGTCATCGTGGTGATGTTCGCCTATGTGGCGTTCACCGTCCTCGCGCCGTGGCAGCTGGGGAAGAACACCCGCACGCAGGAGAACAACCAGCGCCTCTCCGCCGCGATGGACGCCGACCCGGTGCCGGTCGAGGACGTCCTCCCCGCGGACGGCTCACCCGCGGGCGCGGACCGCGAGTGGACCCGCGTGACCCTCCAGGGC # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //