Array 1 25119-25917 **** Predicted by CRISPRDetect 2.4 *** >NZ_VYYO01000007.1 Eikenella corrodens strain EI_05 NODE_7_length_76216_cov_55.1837, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 25119 36 100.0 34 .................................... GTGTTAATAGCTACCCATTACCTGCCCGCTATAC 25189 36 100.0 33 .................................... TAATAGACGTTAGGTATAGTTTGGGCTGTTGCA 25258 36 100.0 33 .................................... TTAGGAAGGTTTGCTACTATCTCACGCTCCCTT 25327 36 100.0 32 .................................... TTAGCTATTGCTACGTATAGCTGGCGTGTTGA 25395 36 100.0 34 .................................... ATATCCTTTTTAACGTATTCCCGACACCCTGTAA 25465 36 100.0 33 .................................... CTAAAAGGGGCTTTATTTTGTCCATTTGTTTTC 25534 36 100.0 34 .................................... CCCGCCAAAATGCCCTTCTGAATCCGAAATTCTA 25604 36 100.0 33 .................................... GCAAATTTCCGCTTCATTCCATAGCATTATAAT 25673 36 100.0 33 .................................... AACGGGATGATGCTCACGCGGTTACCTTGGTTG 25742 36 100.0 34 .................................... TCAGGGTAGGTCGCCTGATTAAAGGTGCTGCCGT 25812 36 100.0 34 .................................... GGAGCGCTTTTGGTGTGCGTTGGGTTTGGATATA 25882 36 88.9 0 ................A...T..T.........A.. | ========== ====== ====== ====== ==================================== ================================== ================== 12 36 99.1 33 GTCGGAAGACTTGCCCCACTCATCGGGGATTAAGAC # Left flank : CATGGCAAGACCGAATGGCGGCGCACACAAACATGACCGTAGGCAATCAAGCACACGATACACTCTATAAAGAATGGAAGGTAGCTCTGCAAACCGCCGCAGAAAGTCCCGATTTCAACGCGGCAGAGAAAGCCGAAATCGCCGCCGAATTTGCAGTCAAAAAGATGATGTCAAAATACATGAAATGGCTGACCGACAAGCGCGGCAAAGAGCTGAAACCCATCTTGGCGAAGTTGCGCGGCGAATAATAAGCTATTGGCCTTGCTGAAACCCAAAATTTTCAGGTAGCTAAAGCTGTTAAATTGTTGAAAAACGTTGTGAAATTTAAGGTGTGCCGCTATAATCTGTACCACAAGCTTCCGACGTATAGCGAAGTATCTGTCTTTCGACTGCTCTTTTTATGAATGTTTGTTAAATAAAGTCTTTGTTGGTTAAGAAAAAAGCTAACTTTTCTTAACTCAATAATAGATTGAAAGTAATTAGATTTTTAAACTGATGCA # Right flank : CTTTTCAGGTAGCCTCAAGTAGGCTACCTGAAAATGTTGGAAGACGTGTCGGTCCATTAGTGATAAACAGCAAAATAGCCTTGATGTAATATCAAGGCTATTTTTGTTTTCAGGCTACCTGAAAGTGGATTTGCGTTTACAGCGTGCCGATGCTGCCTAATATGATGCCTTCGGGCAAGGCGGGTTTGCCCAGCGAATGGATAATGCTGCTGTTGGGCAGGGGGTAGAAGCGTAAATTGTCTTGTTTGGCGCTGAGCATGGTGCAAAGTGTGTCAAAACATTGCCGTGCTTGCTCGCGGCTGCCAATGTGTAGAAATACGCTGTTTTGCAGGGGAATGGCGTGCTGGATTAAATAACGGTGTGCTTTTTGCAGGCGGCGTGGGCTGGCGATGTCGTAGGCGATGAGATAGCGCATTTTTATTCCAAAGTGGCGAGCTCGCTTAATTGGATTGCAGGCTGTTGGCTGTAGTGGGCGAGGGTGGCTAAATAGTTGGTACAGA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAAGACTTGCCCCACTCATCGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 70517-69924 **** Predicted by CRISPRDetect 2.4 *** >NZ_VYYO01000007.1 Eikenella corrodens strain EI_05 NODE_7_length_76216_cov_55.1837, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 70516 36 100.0 34 .................................... AACTCTTTCTGAACCGTCTGCTTGTTCGGTTCGC 70446 36 100.0 34 .................................... TTCTATAAAGAGTCCTACTTCTTGTTGCGCTTTA 70376 36 100.0 34 .................................... TCAATAACGAAGACAATATTTCTGTCTTCTCTTG 70306 36 100.0 33 .................................... AAATAGAGTATTTGCGTTTCCACGGAATTTCGC 70237 36 100.0 32 .................................... AAGTCGGTGCGGAGGATGGAAGCGACGATGTT 70169 36 100.0 34 .................................... AGATGGATACGGCGCGAACGCATCACAAAGTAAG 70099 36 100.0 34 .................................... CCAAACACCCACGCCCAAACCAGCAAAAAGCCGA 70029 36 100.0 34 .................................... CCGTTAAACTTGCGCCAGCGGTAAAACTCAATTT 69959 36 86.1 0 ....................T..T......A..T.T | ========== ====== ====== ====== ==================================== ================================== ================== 9 36 98.5 34 GTCGGAAGACTTGCCCCACTCATCGGGGATTAAGAC # Left flank : AACCAACTGATTTTTTGCGAACTCAAATCCGATTTAAGCTCCCAAAGCAAGCTGGCAGACCCGCTAAGGCAAGTAATCGACCAAAGCCTCAACATGGGCAAAGTACGCCGCGTCCTGATTTTATCGCCCAAAATCCAAAATGATTACCAAAAAGACGCAAGTAAAAAACAACAATGGACAGAATTTGAACGCAACTGTGCCGCCAAAAATATCCAAATCATCATTGCCCGCGACAAAGAGGCTCTAAAAGAGCTGTCGAGTTGACATAAGTGGATGCTTTACATTGTTCAGCCGCAGGAAAATATTAAAAACATTGAGGCCAGCAAAACCCGCGGCTATAATCCCTACTACAAGTTTTCGGATAGATGACAAAAGTCTGTCTTTCGATCGCTCTTTTTAGTAAAGATTTCATTAAATAATGTTTTTGTTGGTTAAGAAATATACTAACTATTCTTAACTATGCAGAAATTTGAAAATAATGGGATTTTTAATTTAGCGCA # Right flank : CAAACAGCCTTGATGGTTTGTTCCATCAAGGCTGTTTTTTGTATCGGGTATTTCTTTCAGGCTACCTGAATAATGCGGTACTGCCCGTTGCCGAATACAGTTTCTTTCCCCAAATGCAACCATTGCCCGATATACAGCATTTGCGAGAAAGCAGGGGGAAGATCGGTCAGTTGCCATGTGCCGATTAGGCCGCTGAGTGGTGTGATTTGCCTTTGACGGTTGGAAAAACGGTGGTACTCATGCCATGAAAGCTGTGGAGGGAAACCTTGCCCGCCGATTTGGCTCGATAGCTCAGCAGTGTCCGTGTGATTATGCCAGTGCAGATGGGCAAGCGTTAGATAACGGCGCAGAAGTTGGCGCAAGAAAATCTCTTGCGTAAGTTCGGTTTCGCGCAAAATCTTGCCTTTTTGTTGGATGCGCAGGGGGGTGAGCAGCTGAATACGCGCTTGTGTAGGATAGCGTTCAGGTAGCCTGATGCTGTTATTGTGCCGCTCGATGGG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAAGACTTGCCCCACTCATCGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //