Array 1 183362-181687 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBID01000015.1 Vogesella indigofera strain DSM 3303 Ga0215675_104, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 183361 28 100.0 33 ............................ CCCGACCAAGCTGCAGACATTCTGGAACAACGT 183300 28 100.0 33 ............................ CGTCAGCACAGCCGACCAGGCCGGCCGGCAGAA 183239 28 100.0 33 ............................ CGGACCTGGTGGCGCAAATCCGCGAGGAAGCCA 183178 28 100.0 33 ............................ TCCTTCGGCCAAGGCTCTGTATTCGTCGCAGCT 183117 28 100.0 33 ............................ CTGCAGGTCGTTTTCGTGCTGGTCGATGTGCTC 183056 28 100.0 33 ............................ CAGCTTGAGGCAAGACTTGCCAAGGTGCGCGAG 182995 28 100.0 33 ............................ CTCTTCTCCTTCCTCTTCTCCTCTTCTTCCTCT 182934 28 100.0 33 ............................ ACAACATCAAGCTGCAAGGCCCGGGCAAGTACA 182873 28 100.0 33 ............................ CTTCAAGGTCAGCCGCGCCGGCTTTATGGTGAA 182812 28 100.0 33 ............................ CTCCTCCAGGTGGTGCTGCACCACCCGGTAGAG 182751 28 100.0 33 ............................ TGCCCCGATCGGGGCACTGAGAGGAGGTTTAGA 182690 28 100.0 33 ............................ CTTCGTGTCTGCCGGCTGGGTGATGTCGCCGCG 182629 28 100.0 33 ............................ TACCGACGGTCCATAGCTGCAGGCCGTTTTTGA 182568 28 100.0 33 ............................ CGGCACAGCCTCATTGCCAGCGAGGCGGAAGTA 182507 28 100.0 33 ............................ CCGGCATCGAGCGCAGGCTGGTGGCGGAGTTGG 182446 28 100.0 33 ............................ CCAGCCTTCATCCGTCTCGCTGTCGATGTTGAC 182385 28 100.0 33 ............................ TCCCCCGATCACCCCTGATCGGATTTGCTTCAA 182324 28 100.0 33 ............................ CGCGCAGACGGCGTACACCGACAAGGACATCCG 182263 28 100.0 33 ............................ TGACGCATCCCACGTCCGACCCTCGCGGATAGC 182202 28 100.0 33 ............................ GCCGTCGGAGCGACATGTCTCCCCGGCAACCGG 182141 28 100.0 33 ............................ TATCGAAGATGCGCTCAACACGCGCGATGCGAA 182080 28 100.0 33 ............................ CTCAATCGGTGCCGCCTCGTTGCGGCTGGCGTA 182019 28 100.0 33 ............................ CGCCTTGCACCACATGGCGCAGGCTTCGATGTA 181958 28 100.0 33 ............................ TCTGACCCGGCTGACCCGGCGCACCGCCGTACA 181897 28 100.0 33 ............................ CCACAACTATCATCCGAGTGCCGGTCAGATCAG 181836 28 96.4 33 ..............T............. CTTGTACCTGGACGAGTATTTCTGGATCCCGCG 181775 28 96.4 33 .......................A.... TTCGTTGTGACGGCCGCGCACGGTGATCTCGAC 181714 28 96.4 0 .............T.............. | ========== ====== ====== ====== ============================ ================================= ================== 28 28 99.6 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : ACAAGGAACACCTGTGTATTGACCTGGCCTTTTCGCTCACCAAAGAACTGGCGGGACGTTACAACAAACAGGTGGTCTCCGGCCGGTTTCGCGAACGGGCCCTGCAGATGGACCTGCTGACGCAGGCCGTGGACGATGTGCAAACCTTGATGGGAGGAGGTAAGCGTGGTCGTCGTGCTCGCCAATGAACTGCCGCCAGCAGTACGCGGGCGCATGAAACTGTGGTTTGTCGAACCGCGCGCCAACGTGTTTGTTTCTGGCATCAAGGATTCTGTTGCGCAAACCGTCGTGGACTATTTGCTGAGTCATTGTCCGGCAGAGTCGGGCGTGATGATTTTCATGAGCCAGCCACAGGCACCGGGTTACCGGCTGTACACCATCGGCCCACCGCGCAAACCGCAAATCGAAATCAGCGGCCTGCAACTCATCGTCGAAACCCTGAATTCGAAATAAACGCATCATCTGGTATCGTTCGCCGCGATCCGCTACCGGATCTTGGT # Right flank : CCATCCAGAAGGGTCAGTTCAAGGGATAAAGTGTGTACCTTTCTGTTTTTTTACGATGCAATAATCATTATCTGGCAAGGCTTTCAGGCCATAGTTCGGTAGAAGTCAGTACCATATTGACTTCCAGGGAAGTCCAAGACAGAGCAGAAACCCGCTAGCCACAAGGCTTTGCGGGTTTTTTGTCGTCCAGGCTTTACGCGGATTGCGTCGCCGGCCGCCAGCGCCGCCACAGCGGGGCGAGGGCGCCCTGGGTCAGGCTGACGCCGAGCAGGATCAGGCCGCCGCCCAGCCAGTGATAGGCGTGGATGGTTTCGCCAAGCAGCAGGCTGGCGATCAGCGCGGTAAACAGCGGCAGCAGGTTCATGAAGATGGCGGTGCGTTCGCTGCCCAGCTGCTGCAGGCCGCGCATCCAGAAGTAGGCGGCGAGGATGGAGGAGGCGATGCCGGCGAACAGCACCAGCGGGATGCCGGCGGCGGGAATGGCCAGGCTGTCTGCGCTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //