Array 1 19928-22330 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJJP01000037.1 Nitrosomonas sp. Nm84 Ga0181060_137, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 19928 37 100.0 33 ..................................... AAGCATTACATCAACAATCACGGTAAGAAACCT 19998 37 100.0 39 ..................................... CAATATCCACATTACCAAGAGTAGAATAGTTAAATATAT 20074 37 100.0 34 ..................................... CTCTGGTACTGCTTGTTTAGTAGCTTTTGGAGCA 20145 37 100.0 34 ..................................... GCTCGCCCAGAACGTTTTGCCGGTGGTCGATACG 20216 37 100.0 34 ..................................... TTTTCGACAGAGTGATATCGACTTTCAATCTCCC 20287 37 100.0 35 ..................................... TTACAAGACGTTCCCTCTCCATCACTATGGGATGC 20359 37 100.0 34 ..................................... TGGCAGCACATGGCAAGTATGAGCAGTTGGTAAT 20430 37 100.0 35 ..................................... TGAAATGGTCGTCTTCCACAACACCAGACTTGCAC 20502 37 100.0 36 ..................................... TACCCCGCAGGCAATTGGGATGCACCACTGATTGAT 20575 37 100.0 36 ..................................... AAAACCGAGGGTGAGTTTGATAATTGGTTGGATGAA 20648 37 100.0 37 ..................................... AAAAGACTAAAGCATAAAGGAATAGATTGTAAATTAG 20722 37 100.0 34 ..................................... ATGTAATACCCGTTTCAATACCTTACTCATGCGA 20793 37 100.0 35 ..................................... ATGGAGAAGTTTAAACCGCAATTGGCACTGGCATT 20865 37 100.0 34 ..................................... ATAGCGCGAGAAACGGGTTGCACTGAGGATTGGG 20936 37 100.0 36 ..................................... ACAGATCATGATTGGGATCTGGTGGAAGTGTATGTG 21009 37 100.0 35 ..................................... CTGACGTGATCTCATCGTGAGTCAGCAGATGTCCA 21081 37 100.0 34 ..................................... CCACAACAACTCGACCAGCAAACAGATACTTTTT 21152 37 100.0 34 ..................................... CTGGCGGTGGGCACGCAGTGGATCGTATCACCCG 21223 37 100.0 34 ..................................... AGTAATGCCGCAGGGATAACCGGGTCTCCGGCCG 21294 37 100.0 34 ..................................... ACAATTGGCAACAATACCGGTCAGCCAAATGGAT 21365 37 97.3 35 .......................A............. TCAGATTTCAAGGCTTCCATGCTGCTAAAACAACC 21437 37 100.0 35 ..................................... AACTGGTATCGCAACAAGCCGAGCATCGGTATGTC 21509 37 100.0 34 ..................................... CCGCTCATTTGCTTTTATCCCAATAGAGCTTTGA 21580 37 100.0 34 ..................................... CGGCGTGCTGTCGATCTCGAACACGATGGCCGGG 21651 37 100.0 34 ..................................... ATATGTTTTCCTTGTATTCCGTTAAATTAAATAA 21722 37 100.0 36 ..................................... GAGTTGACTGATGTGCCCGTGGATAACGGCGATTGG 21795 37 100.0 34 ..................................... GACGCGCAATGCTCGCAGGTGCTGCACGATGTCA 21866 37 100.0 35 ..................................... TCGTATCGTGTTAGTGTTTTCATGTTAGTTTCTCC 21938 37 100.0 34 ..................................... TCTCTTGTTATTAGCTCATCAATTTCATTGGCAA 22009 37 100.0 34 ..................................... ATCAAGAGTAGGTAGACTAAATGCCTCTTGAATC 22080 37 100.0 34 ..................................... CAGTGAGCTTAGTCCAATTGTTAACTGTCATTTT 22151 37 100.0 35 ..................................... CATTATTCATTCTCCTTTTTGTCAAACTGATCACG 22223 37 100.0 34 ..................................... TGGCATCGTCGCGGCTGAGGTGGCCTACTTGCAT 22294 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 34 37 99.9 35 GTAGCGCCCGGCCCTAAAGCCGGGCGAGGATTGAAAC # Left flank : GGCTACATCCCTTTTTTGGTGAAATAATCATGCTGATCATCGTAACGTATGATGTTTCTACTGAAACCAGAGAGGGGCGCAAAAGATTGCGGCGCGTAGCCAAAATATGCGAAGGAATCGGGCAGCGTGTGCAGAAATCGGTATTTGAATGTAAGGTCACGCTAATGCAATACGAAGAGCTGGAACGCAGGTTGCTAGCCGAAATCGATGAGAAAGAAGATAACCTCCGTTTGTATCGTTTAACGGAACCAGTTGAATTGCATGTCAAGGAATATGGAAAATTTAAAGCGGTTGATTTTGATGGACCATTGGTTGTTTAAAATGCGCGAACCACAAGCAATGACAAAAACCCAGTCTGTTCGCGATGCATATAACTTGATGAATATTATGAATACTATTAAGAGAATGTTGTTTGATATGCTGCTGACTAACCGTAGAAATAGGCAGTTCGCGCATTCACAGCAATATTCCTTGTTGTATGATGGAGTTGTAGTTGTACT # Right flank : GGCTACAACAGACACGATGATGTGTGCTGTCAAAAATGGAGTCCATGTGTTTTAAGCAGCGGCTAGATTTGCATAGTATCGCTGTGTAAATTGTGCTGGTGACAGATAACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCGCCCGGCCCTAAAGCCGGGCGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-16.10,-16.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : NA //