Array 1 971663-972410 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP068390.1 Pseudomonas chlororaphis subsp. aurantiaca strain YS21 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
    971663	    28	 100.0	    32	............................	AAATCGACGTTTGCGCTGACGTAAGTCCAGCT	
    971723	    28	 100.0	    32	............................	CGGCACCAGTTTCGGTGCCGACCAAAGCACCC	
    971783	    28	 100.0	    32	............................	AGGCTGCGCGGGCGGTTCCTGGTGCACGCCGC	
    971843	    28	 100.0	    32	............................	AACAAGCGGCGCCGTAGCCGCTACGTCACGAG	
    971903	    28	 100.0	    32	............................	AGGGGATCAGGGTGTAGTTGTCGGGCATGCCC	
    971963	    28	 100.0	    32	............................	ACGAAGGCCAGTACCACGCCGGCCACTACCGA	
    972023	    28	 100.0	    32	............................	ATGATGTCGCTAGCGTCATTGTCGATGTGGAA	
    972083	    28	 100.0	    32	............................	CTACTGCTGGCCGAGGCCGGCGAAACCTTCAT	
    972143	    28	  96.4	    32	...........A................	GCCAACCTGGCCGAGCTGTCGGCCCGCTATGT	
    972203	    28	  96.4	    32	...........A................	TGCCCCTGCACTGAGTTTGCTACGAGTGGTGC	
    972263	    28	  96.4	    32	...........A................	ATCTGCGCTTCGCGGCCAGCGTTGTAGGACTG	
    972323	    28	  92.9	    32	...........A..........C.....	AGCCGGGCTTTTTGGTTTCTGCAATTTGGCTA	
    972383	    28	  67.9	     0	.C.........C.C.......CC.AGCG	|                               	
==========	======	======	======	============================	================================	==================
        13	    28	  96.2	    32	GTTCACTGCCGGATAGGCAGCTTAGAAA	                                	       

# Left flank :   AAGGCTCGTTGCTCGCTGCCTTGAAACCCACCGCCGCAGGTCCTGCGGGTAACGATTCGCTCTTCACCGTCCGCCCCGGCATCAGCGCCGAAGAAGCGTTGCTTCACGTTTCCATGCTGCTCAAGTCCGCCGAGGAGGTCTCCGACGAAATCACCGAACACGCCAGCGGTATCGAGCGTGGCCTGATCTGGTCGCTGGTGCATTCCGTGGAGATGGCGCGCGGTGTGGTGGATGCCTTGCTCGACGGTAATCGTCTCTGATCGACAACGGCCCGCTGGCCGCGATCCTCCTTGAGATTCGCGGCTGGGCGGGCCAGCCAAAACGGATTCATGGCGCTAGTCTGAGCGCCGGTGTTCTGTCCCTGACGCTGACCCTTTTTTCCGAACGGATTCCGGCCCTATGTAAATCAAACACTTACAAAGGTCTCTAGAAAGAGGAGTAAATATGGTGTCCAGCATGATTTCTCTTTGAAATCATGGCGCTATTGGGATATCTGTCTA
# Right flank :  GTTAATCCATAGCATCAGTCCGCGTTGGGAGATAACACCGCGACCCAGTTCCCAATCTCACTCCACAACCATGCCACCTACCAATCCCACCCCTTGTCATATCCCCTTCATCGCCGCCTACTAAGGTTTGCTTTTGACATTAAGTCAGGGAGCAACCATGAGCGATTTCACTCTCGGTCGGCGGCGTTTGATTCAGGTGGCGGGGGCAGGGCTGTTGCTGCCGGGGTTGGCGCCGGCGGTGATTGCCTCGGGCAAGGACCGGCCGAAGATGGTCGATGGCGTGCAGTCCGGGGATCTGCTGGGCGATCGGGCGATGGTCTGGAGCCGTACCGACCGGCCGGCGCGGATGATGGTGGAGTGGGATACCCGCAGCCTGTTCAGCAATCCGCGCAAGTTTGTCTCCCCCCTGGTCGATGCCCGCACCGACTTCACGGCGCGGGTCGAGTTGGGCGGGTTGCCCACCGACCAGGCGATTTTTTATCGGGTGTACTTCGAAGACG

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGGATAGGCAGCTTAGAAA
# Alternate repeat :   GTTCACTGCCGAATAGGCAGCTTAGAAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [61.7-41.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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