Array 1 188981-192132 **** Predicted by CRISPRDetect 2.4 *** >NZ_UCPR02000046.1 Acinetobacter baumannii strain D14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 188981 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 189041 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 189101 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 189161 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 189221 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 189281 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 189341 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 189401 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 189461 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 189521 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 189581 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 189641 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 189701 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 189761 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 189821 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 189881 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 189941 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 190001 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 190061 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 190121 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 190181 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 190241 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 190301 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 190361 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 190421 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 190481 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 190541 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 190601 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 190661 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 190721 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 190781 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 190841 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 190901 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 190961 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 191021 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 191081 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 191142 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 191202 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 191262 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 191322 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 191382 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 191442 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 191502 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 191562 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 191623 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 191683 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 191743 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 191803 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 191863 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 191923 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 191983 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 192043 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 192103 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //