Array 1 18858-21023 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAERRH010000023.1 Streptomyces musisoli strain CH5-8 23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 18858 33 87.9 28 .......T................T....G.C. TCATCACGGTGCCCTTGCGGGAGTCGTA 18919 33 84.8 28 ..............T.........T.....TCG ACAAGGCCCTGTCCAACGTCCGCGCGGT 18980 31 78.8 39 ....-..........-.C...........GACC GCGGATCGTCCGACGGATGCTGGCGGTCCGCTCCGCCGA 19050 33 90.9 28 ...T.........................CA.. GGACGACGGCCGCCATGAAGGACCCCGC G [19066] 19112 33 78.8 28 .......T......G........C.....CGGG TCCAGCCGTCCTGGTTGAAGGTGACCGA 19173 31 81.8 28 C................--...........ACA ACGCCGCGGTAGCCAAGCACGGGTCAGC 19232 33 78.8 28 .C........G.T................CTCC GGGAGCCCTGCGGCCCCGGGGCTTCGTC 19293 33 90.9 28 .............................CG.C AAATGCCATTCCCGGGCGCCACGATGCT 19354 33 81.8 27 .....T..............A..TT......GC GACGGCCTCTTCGAGGTCTGCCACCGT A [19384] 19415 33 90.9 28 ........................T......GA TGAGCAGGTCGAGGTGGTCGAGGACTTC 19476 33 81.8 28 ..................A.....T....ATGA ACGCACGGTGGATGACTTGAATCCGGGA 19537 33 84.8 28 ......T......................ATGG ACGTCTTCCCCGTCAAGGTCACCGGCGT 19598 32 78.8 21 ..........T.............-..GAG.TG GTTGCTGACGACGATGGCGAC Deletion [19651] 19651 33 87.9 28 ...T....................T...A..G. GGCAGTAGTCCTCCACGAAGACGCCGTT 19712 33 81.8 28 ...T....................T....CAGC TGAACGCGCTCACCAAGTCGGGCACAAA 19773 33 87.9 28 .............................AACC TCGACGCGCTCGGCCCCACCACCGCACC 19834 33 90.9 27 ........................T....C..C GTTCCGGATCATCCAGCGCGTGGACGG A [19863] 19895 33 87.9 28 ........................T....GTG. TCACGGCCGAGGACGGGTCGTGGCTGCA 19956 33 87.9 28 ........................T.....TGG ACGCGGTCTTCTGCTGCCCCCCATCTGG CT,G [19958,19964] 20020 32 87.9 28 ..-.....................T....G.G. CGAGTGCGCGGGAGTCGAAACGCCCGTG 20080 33 81.8 28 ..............T.........T....AGGA GGGCGTCAAGGCGAGTCATAGGGTCGCT 20141 33 84.8 28 .C......................T....G.GC TGCCCCCGTCCGACGACTCGGCCGCGCA 20202 33 90.9 27 ...T............T..............G. GTAGCGCTCGCTGCCGGCCACGTTCGT G [20232] 20263 33 87.9 28 ........................T....CGG. CGCAGCCGACGGTCTCGGACACGGTGCG 20324 33 90.9 28 ...T....................A......G. CCAGCCAGTGGAGGACGAACACGCCGTC 20385 33 84.8 28 ...G....................T....C.GA GCGACACGATGAGGCCGAGGACGGCGGA 20446 33 87.9 28 ..............G...............GGA ACGCCGAGAGCGAGCTGCTGACCTGGTC 20507 33 84.8 28 ................T.........T...AGC CTTCGGCGTCCTCGGGGCCGAGTGCGAA 20568 33 81.8 28 ..T.......G.............T....G.GG TCCAGCCGGCCAGGTAGGCGAGCTCGGC 20629 33 100.0 28 ................................. CGTGGGCGGCCATCCGTGTCTTCTCTTC 20690 33 100.0 28 ................................. CGTGGGCGGCCATCCGTGCCTTCTCTTC 20751 33 84.8 28 .......................AT.....AGA GCGTCCGCAGCCCGGCGGACGCGGGTCG 20812 33 84.8 26 .................C......T....CT.G CCACCTCCGGGATCGGTGAGCTCGGC 20871 33 84.8 28 ........................T....ATCC CCCGCCGCAAGAAGAGGCTGACCCTCAC 20932 33 90.9 25 ..............................GGC ACGTCGACATGGCCGGGTCGCTGGC 20990 33 81.8 0 ...................T.C..G....G.GG | G [21016] ========== ====== ====== ====== ================================= ======================================= ================== 36 33 86.3 28 GTCCTCCCCGCCGACGCGGGGGTGCTCCGTCAT # Left flank : CAGACCCCAACCCCGTTGTGACTGACCCCTTACAGATCGTTCACATGACGTTAAACATGAGATCAAGCAGAGGTCCAGACGGTCACAAACGGACATCACGCGCCAGAGAAGCCAAAGAGAAGCAGAACGCCAAGTGACATGAAACACACGGACTGTTATGGAGTGTGAGTCTAGGACTGCACCGTCACCGACCCTTAGCGGCTGCCCCCGCACCCACGCTGAACAGGGCTTATGAGGTCCACCATGCATCAACGCCGCTTGTCCGGCACTGTGACTGAAAGTAGCTGCTCCGACAGTCGCCGTCGGCCCTGTTCGTGGAGACCGTGGTATGTGCTGGAGCCAAGCCCTCGAGCAGCGGACCCGCCAGCGATCTCACGAGACGCGGCAATTACACAAGAGCTAAGCCTGAGGGAGTGACTCACCCGAGAGCACCGCTCCAACAAGAACGCCTTGCAGGTCCCGCAGCAACTCCTCTTCGCTGACAAGCGAATCGCAGAGCT # Right flank : GTCGTCACCGATCCGCTGCCGCCGCAGGGCCTTACCTGACGGCAGATGGCCGCCTGGTGGAAGAAGAACCACCAGCCGGACACCGATGAGATGACCGCCGCGAGCGGTCTGTATCGGCGTCTGTACCGGTCGCTGGACTCCGTGCCCGAGCAGCTGGTGATGCGCACGTACTGCGCCCGCTACGCCGAGGACGGCGGCTTCGACCTGCCCGCGCTGATCCCCCAGGTCTACCTCCACTACAACCCCTACACCCGCCGCAGTGGCAAGCAGTCCGGCGCGCTGCCCCGCCAGCGCATGGACTTTCTGCTCCTGGCCCCGGACCGCTCCCGCATCGTCATCGAGGTCGACGGCGTCCAGCACTACGGCCGCCCCAACCCGCCCAACGACACGGGGCGGATCACGCACACCGCCGTGCCGCGGCTGTACGCGGAGATGGTCGCCGAGGACCGGCGGCTGCGGCTGGCCGGATACGAGATCTACCGCTTCGGCGGCTGGGAACT # Questionable array : NO Score: 4.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.31, 5:0, 6:0.25, 7:-0.04, 8:1, 9:0.09, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGCTCCGTCAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [26-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,1.15 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], //