Array 1 33460-29195 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPGQ010000020.1 Clostridium saudiense strain 1001275B_160808_G2 NODE_20_length_59219_cov_26.6668, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 33459 30 100.0 36 .............................. ATATTATGTTCATTATCTATATTTTCATATTCCCAC 33393 30 100.0 37 .............................. TCAAGATTGTTAAGCTTATCTATTTCTTTTAAGAGTA 33326 30 100.0 35 .............................. CAAATAATTACACTTTCTAAAGGCATATTTAAATC 33261 30 100.0 34 .............................. TCAAACCCCTTAGTACTTGGGAATAATTCTTTTC 33197 30 100.0 37 .............................. CTTGAAAAAGTTACCTCAAATTCCCCATTTCTTCTAT 33130 30 100.0 37 .............................. ACTCTGAATAAGTTTATAGATAGTAATTGCTATAAGA 33063 30 100.0 37 .............................. AATGGAGACATTCACTATAAATTAGATACGGCTGAAA 32996 30 100.0 36 .............................. GAGTGATTTAAGTTTATACTTGAGAGTACAATACTA 32930 30 100.0 36 .............................. CTTGAATTTGTAAAACAATACTTAAGGGTTGACCAC 32864 30 100.0 35 .............................. GAACTTACTTTAAAATTAGATGTTATTCAAACTTA 32799 30 100.0 35 .............................. CATTATTATCATATTCGAACATTGTTGTTCCCTCG 32734 30 100.0 36 .............................. TTGTATATAGATAGGGTAGGGAACACTAAAACGGCT 32668 30 100.0 36 .............................. TTTATTGAAGTAGTAGGCTCAGGATATGCTTACGAC 32602 30 100.0 37 .............................. AGTAAGGGAGCTACTGACGCCTGTAGAAATTTTGAGG 32535 30 100.0 35 .............................. TTATCCGGATTAAAAAGAGTTAATTGGGAAAAGAA 32470 30 100.0 36 .............................. AGAACTTCAGCACTTTTCTTAATTTCTTCTTTTAAT 32404 30 100.0 37 .............................. TATGCTAGGTCTGTATTAGTATCACATCTATTAGGAG 32337 30 100.0 35 .............................. CTAATTTGAGTTACAGTGTAAGTGTTGTTATAAAC 32272 30 100.0 36 .............................. ATACAATCAGCAAAAGCAGTAACACCAAAAATACTC 32206 30 100.0 37 .............................. TCTACAAAGAATGAATTTATTAGTGTTTTAACAAATC 32139 30 100.0 35 .............................. CAGGAAATGACACATTATTTAATTTAATAAATAGC 32074 30 100.0 36 .............................. AATTTTTTATTAAGTTCTTCACATGCAGATTGTCTA 32008 30 100.0 36 .............................. TTATTAACATTTATAAATTGCATTTTTATTGAGTAC 31942 30 100.0 36 .............................. TTCTTTCAATATCATTACTTTTATTTTCATATAATT 31876 30 100.0 36 .............................. CAAGGGGGAAGAGGGTAAAAAGTATTTAGAGTGATG 31810 30 100.0 36 .............................. TAAAAAAAATAAAATAATTGTTGCAATTGTTTCAAA 31744 30 100.0 36 .............................. GCTTTTAATTGAGTTTCTGGCATTTCTTCAGTATTA 31678 30 100.0 35 .............................. TAATTTCATCTGAATTATAGGGGTCGTAACATATC 31613 30 100.0 35 .............................. TTATTAATTTCAGCTACAGTTATTCTTTCCTCTAT 31548 30 100.0 38 .............................. GAGGATTATTTTGATCCTTTTAATACTTTCATTCATAG 31480 30 100.0 35 .............................. ATCTAAGTCCTCTCTATTAGCTTGTTGAACTACTA 31415 30 100.0 37 .............................. ATGGAAATTATAAATAAACAAACAAATACTATAGATG 31348 30 100.0 35 .............................. AATTCATTTATATATGCTTCTAGTAAACTATCATC 31283 30 100.0 37 .............................. TAGCAAGTGAAGAAAAAACATTAGATGGTATTTCTCC 31216 30 100.0 36 .............................. CATATAACTCTATATACTCCATTTGCATTTACTGTA 31150 30 100.0 37 .............................. TAATTTGTTACCTCTTTCACTTAAATATATTTTGTAT 31083 30 100.0 36 .............................. CGCTTATGGAACAAACCATTATAATACAACTAATAG 31017 30 100.0 36 .............................. CTACCACAACCTAATAACATTTGTTTGCTATTTTCG 30951 30 100.0 36 .............................. TCTTTAAATTGATTATGCCAATTTACAATATTAGCT 30885 30 100.0 37 .............................. GCAGACGCTGAGGAGCTAGCTTATAAAGTTATTGAGG 30818 30 100.0 37 .............................. ACTTGAAGCCCATCAATTTTATTATTTGCATTATTTG 30751 30 100.0 37 .............................. TCTTTTAAGGTACTCTCTATCTTCCAATCCTTTAACT 30684 30 100.0 36 .............................. GTAGTTTCTTGTGACAAAGAAATCAAGAGATATACT 30618 30 100.0 37 .............................. CAATTAAAGATGATATTGCAGAAGCCAATATATCTGA 30551 30 100.0 36 .............................. ATAGCCTTATTAACTAATCCTATAACTGCATTTAAT 30485 30 100.0 36 .............................. GTAATATTACAAGTGTTTGTTTTAATGAAGTTGAAG 30419 30 100.0 36 .............................. TTTACAAAATCAACTTTAAGATTTTCATGAGATTGG 30353 30 100.0 37 .............................. CCGAATACCTACAGGAACAACGAGGCTATGCAGATGA 30286 30 100.0 36 .............................. GAGGGTGCAAAATATTTGTTTGTATGGTATGGAGCA 30220 30 100.0 37 .............................. TTAGGTACAGAAGATCTATCAACATTACAACTATATG 30153 30 100.0 36 .............................. TGTTTAATGGAAGTATTATAAAAGATGGTAAAATAC 30087 30 100.0 36 .............................. TAATATTTCGCAAACTTAACCACTTCACTTGATCTT 30021 30 100.0 36 .............................. TTGAACTTCCACTTGCTCCTAATAAATACCCTGGTA 29955 30 100.0 37 .............................. CATTATTTATAACTCCCCCATCTGTGAAAGACTTTTT 29888 30 100.0 36 .............................. TAGGTTGTATATCCTGTATTAGTTCTTTTAATCCAT 29822 30 100.0 37 .............................. TAAAGAATGTTTGAGAAGAGGTTTCCTGTACTGGTGC 29755 30 100.0 36 .............................. TTTCTGAATCAGAAATAATAGTAGGGTAAACTTTTA 29689 30 100.0 37 .............................. CCACTTAAATTTGGAATTGGTTTATAGTTATAATTTG 29622 30 100.0 36 .............................. CGGTTGAATATGTCTTTTATTTCCTCTAAATATTCG 29556 30 100.0 36 .............................. GTAATATGTCTTTATTTTATCGCTGTATTGATAATT 29490 30 100.0 36 .............................. ATTGATAAGGGCTTATCAACTAAAAATTTAAAGTTA 29424 30 100.0 36 .............................. CTGGGTCTGATGAAGAATTAAATTTTATGTCTAGAT 29358 30 100.0 37 .............................. GAAGTAATGACAATTAAAGATGTACAGGAATTTCTTA 29291 30 100.0 37 .............................. TTATATACAGAAATAAACTCACTAACTACCTCGGTTA 29224 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ====================================== ================== 65 30 99.9 36 ATTTAAGTAGTACCATATTGGAATGTAAAT # Left flank : AATATGATCCATTTAAAATTTGGTGGTAAGGGGATTGAATAAATGTATGTTATACTAGTTTATGATATAAAAACAGATGATGGTGGTCAAAGGGTGTTAAATAGAACATTTAAAATATGTAAAAAATATTTATGTCATATACAAAACTCTGTTTTTGAAGGTGAGTTATCAGAAGCACAAATTGTCAAACTTAATTATGAATTAAAAAAGGTTGTAAGGGATGATAGAGATTCTATAATTCTATTTAAGAGTAGGAGCGATAGATGGTTGAGCAAGGAGATGTGGGGTAAAGATGATGATAAGACTAGTAATTTTATTTGATTGTCGACCACAGATAGTGTTAAAATATAGGGGGATAGACAAGAGTAGATAAATACTAGGTTATAAGATGAATATTGCTAATAGTTTGAGATTTTAAATATTGTTGATATGAAAATTTATTATAGGTAGACAAAAAGTAATGATATTGAATAGAAAAATCAGCTTATAAGAGTTGTCGG # Right flank : GAGAGATATGAAAAGAATATAAAAGAAATATTTGTAAATCTAAAAGTTTAAGAAATTTAATAAGATTGATGACTTTTAAAAGTTAATAATATTTCATTATTTGTATAGAGTAAATACAGCGGATAAAGTACATTTAATGAATATAACATCAAAATATATATTTAAAAATACTAAACTAATAAAAGTACTAAAGAAAATTTGAAAATTACCATAAGGTATATTATACTAAAAAATGAAAAACTTAATATGGACAGTTCATTAAGACCATCCTGTCCTTAAACAAAACTAGGCTAAGAAATATTAAATAGATTAAAAAGTTAAGGTTTATTTTATTATGCTAGTTTGTGTAATAAAATAAACCTTTTTTATTTAATAAAATAAGGCCTAAAAATATTAAATAGGAGTGATAAGTATGAATAAGAAAGCAGTAGTTGTATTTAGTGGAGGCCAAGATTCTACAACATGTTTATTTTGGGCCCTTAAAGAATTTGATGAAGTAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAGTAGTACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 43040-42033 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPGQ010000020.1 Clostridium saudiense strain 1001275B_160808_G2 NODE_20_length_59219_cov_26.6668, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================================================================================================================================================== ================== 43039 30 100.0 36 .............................. TGGTGTATGTGCTGCAATATTATCTAATTTAAAATA 42973 30 100.0 36 .............................. TGGTGTATGTGCTGCAATATTATCTAATTTAAAATA 42907 30 100.0 36 .............................. TAAGTAAATCTTTAAGTTTTGGAAGTTTCTTCATTC 42841 30 100.0 37 .............................. TCACGTGCTATAGTAAATCGCTCTGTCTTTTTTGGTG 42774 30 100.0 36 .............................. TTTGGTTTAATAAATTTCTATGACACTTTTAAACTT 42708 30 100.0 36 .............................. GCAGCTTTTAATAAGAATCCATTTTTAAATAAATTC 42642 30 100.0 36 .............................. GTTTGAATAGCCATAAACCCACCTCCTAATCATTTA 42576 30 100.0 36 .............................. GAGGACGGTATTGTTGGAAATGAAGAAAGAGTTGAA 42510 30 100.0 37 .............................. GTAAATAAACTTGCTACTGCACCTATAGCACTACCAC 42443 30 100.0 36 .............................. GTTGATACAAATGATAAATTATTTGAAAATAAAGAG 42377 30 100.0 36 .............................. ATATTTTATACAAATAAACCAATTAGGCATAAAAGG 42311 30 100.0 164 .............................. ATTATAATTAGAATGGAAATAAAGAATAATAGAATGTTAATAGATTATTATTTATGAGTCAAAGAGTTAAAAAATAAGAAAATAAAAAATAGAAATTACATTTACATAATATACCTTATGTAGTAAAATATATATTATAAGAGATTTACTTATAATTTTTTTAA 42117 29 90.0 25 ...-.....T..T................. ATGCTGTAAATTATAGTATAAATAT G [42090] Deletion [42064] 42062 30 76.7 0 T.T.......TA.....G........TT.. | ========== ====== ====== ====== ============================== ==================================================================================================================================================================== ================== 14 30 97.6 45 ATAGTAGTAGCTCCATATTGGAATGTAAAT # Left flank : ATTCTAGTGAGGGGGCGAAATGAAAAAATTCTGTTGTATTTTATTATGGTAGGATTACCGATTATAGCTATAACTTGATAATAGTAATTGGATATAAAGTTGTTCTGATTGATAGAAAAAGAAGAATTATTTCTAAAGTATGAGGAAATAGATCTTAAGGTTTGATAAATCTTATTTCAAATAATAACTTTATTTGGTATGTTGTATGTTATAATTATATTAGGTAATAGTAGTTGATAACTTTAAATTTAAACATATTTATAATGTCTGAGATAAATATGTTTAAATTTAATTATTAAAGTAGAAAAAATAAATTAATTTAATTGTCGACCTAACATATGGTTAAAACATAGGGGGGAGACAATGTTATATAAATTCAATATTAGGGGTTGAATAAGTCTAAATATTTTATTTGAAAATATCTATAAAATTTACAAAATATAGAGATAGACAGAAATAAGGGATATATAATAAGAAAATCAGAGTTTAAGAGCGGACGC # Right flank : ATAATTCTATAATTAAAAAATAGTAGATAAAACAATGGGTGAGGTGATAATAAAAATAAAGTATGAATTAACAAAATAAAAGGAGGAATAAAATGAGATTTACTTTAACCTTAGAATTAGAGAAAAGTAGTTTTCCTATTGATTATAGAAGTATAGTCTTAAGTTTTATAAAAAATGCAATATCAAAATGCAATGATGGAAAATATTATGATAGATTTTTTAAGGATACTAATCAAAAGGATTATTGCTTTTCAGTAATACTACCTAAATCAAGATTTACTAAAGATGAAATAAAGTTGGAAAATAATAAGTTAAAAATACTTTTTTCAACAGGAGATGCAGAAAAAACAGGATTAATTTTATTTAATGCTTTTATTTTGCAAAAGAATAAAACGTTTTCACTACCGAACAAAAATTCAATGATATTAAAAAGTATAACAAATCAAAAACAAGATTTAATAGTAAACTCAAGAGCTATATTTAAAACTACAATAGGTAGT # Questionable array : NO Score: 5.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.98, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAGTAGTAGCTCCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.60,-2.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //