Array 1 377179-375409 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEFH01000001.1 Wohlfahrtiimonas chitiniclastica strain F6515 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 377178 28 100.0 32 ............................ AAATAGATCTCAAACGCATACGCCCATAAGCC 377118 28 100.0 32 ............................ AAACTATAAGCTTGAATCAGTTAAGTATGCGC 377058 28 100.0 32 ............................ AAAACCAGTAAAGCCACCCTCAGCAAAGCCAA 376998 28 100.0 32 ............................ TATTAAATACGTTTCTGAGTATATCGAAAATT 376938 28 100.0 32 ............................ TTTAATGAGCTCTGAGTGACCTTGCCGACTTT 376878 28 100.0 32 ............................ TCTACTGCTTCCCCAGCTCCGCCGCCTGTTCT 376818 28 100.0 32 ............................ TTATTAAATCAGTGCATTTTTTTGATAAAGAT 376758 28 100.0 32 ............................ TCTAAATCTAAAATTAAACTGATCGCCGCGCT 376698 28 100.0 32 ............................ AATTGAGCAGCCTGAGCTTACGCAGGATGAAT 376638 28 100.0 33 ............................ TTATCGCGTTGAGTACGTCATGAACGAGCTGCC 376577 28 100.0 32 ............................ ATCTTCATGTAGCTCAAAGTTTTTCTTGCAGT 376517 28 100.0 32 ............................ GTCACAACGATTTTTGCATTGTTCGCGTTATT 376457 28 100.0 32 ............................ ACAAATTGAGCGCGTCTTCTAAATCGATTTGC 376397 28 100.0 32 ............................ GATTGCGTCTGTAATATCGTGAAAGATCGCAT 376337 28 100.0 32 ............................ AATCGCTGAATCACATCTCTATATTGACCGAG 376277 28 100.0 32 ............................ TTGCGTCAATTGCAGATTTTGTATGATCAAGC 376217 28 100.0 32 ............................ TAGCGACGAGGTGATCACATTGCGCGAGAAGA 376157 28 100.0 32 ............................ TGTGTAGTGAGAGTTGCTAAAATAGCCGACTT 376097 28 100.0 32 ............................ TTATTCAAAATGGCTTAATGGGTAACTATGAA 376037 28 100.0 32 ............................ ATATTGATGACGGATCATTAATTTCATCACCA 375977 28 100.0 32 ............................ TTTCATCGTCAAGATCATGATCAACGCGCAAG 375917 28 100.0 32 ............................ GTAGGTGAATGATGAAAAGATTTTTTATTTTT 375857 28 100.0 32 ............................ CTCTTTTTAACTAGTGCACAGCCTCCAATTTG 375797 28 100.0 32 ............................ AATATGTTATATATCTTAAACAGCTACCGTTT 375737 28 100.0 32 ............................ ACAAAGAAAAACTCGCAGAGGTTGAAGAGTTG 375677 28 100.0 32 ............................ TGCGCTACAAGATCAAGAGGTCACGGATGGCC 375617 28 92.9 33 ..........G.......A......... CCGAGTAATCCCGAGGATGTCACGCTTAAAGAC 375556 28 100.0 32 ............................ TGTGCTTTGCACAAGATTTTTCAGAGAAGGTT 375496 28 100.0 32 ............................ GCTACTACTGCCCCAGCTCCGCCGCCGGTTCT 375436 28 92.9 0 ..........G.......A......... | ========== ====== ====== ====== ============================ ================================= ================== 30 28 99.5 32 GTTAACCGCCACATAGGCGGCTTAGAAA # Left flank : GATCGATTATTAGATTCTGTTCATATCCAATCAATTAAAGAGGTTCCCTCTAATATTGAAGGATATGCGAAATATTTTTATTGCCGACCAAAAGGGGAATCTCGATTGAGGAAAGAGAAGAAGGGATATGCTGAATACTACGCTCAATCACATTCGGTATCTGTAGATGAGGCTCTATCTCGATATGATGATTGGGAGTTTAAAAAGGTCTATTACCCTTATATTCAGATGAAGAGTCTTCATCGAGATAATTCATTTAAGCTTTTTGTCAAAAAAGAAGTTGTGCAAGAAGAAAATCTAGAAAATAGCACTCATCAGCTATTTACAACTTATGGTTTATCTGCTGGGGGCATTGTTCCTGAGTTTTAACCATTATTTTTTTGTTCTTTAAAAATTTGATATAATTCAGTATGTTATAAGAAAGGGGGGAAATCATTGGTTTTTTAGGGTGAAATACTCAAGAAATTAGGATTTCTCCCTATTTTGAGCATTTAATCTCA # Right flank : AGTGGTTCCATGGTGAATTTGGAAAGTTTGCGGTTCACTGACTAAAAATTGAGAGTTTATAAATGACATTACTAAAAGTGTTGGTACGACCTTTGTTTGTGTTGAAAATTCATTCATCACATCCTTGCCAGTGTTTGCAGATGCCAATAGCAATACCGGTAGCAGCACACAATGGAATAATTCTGTGAACATTAAAATGTCCATCGATATGTATGACAATGGAGTGATGGATATTGGTGTGAATGCAGAAATTGAAAATAAAAATGAAATCTCAGACAGATTTAAACATTATTGTGGCTATGTGCTTGGGCGTTTATTCAGTGGTCAGTTGTATAAACGCGGCTGGGTGAATAATGAGCATTTTGGTACAAGCAGCCATTAAGACTGTTGCATTTGTAGCCATTGATCAAGCGCGTTGGCAAATTGTTGACGCTCTTTTTGTGATAATGGTGGTGGGCCTGAGGTTTGTACGCCACTTGAGCGTAATTCATCCATAAAGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACCGCCACATAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTAACCGCCACATAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.90,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 506485-505017 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEFH01000001.1 Wohlfahrtiimonas chitiniclastica strain F6515 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 506484 28 100.0 32 ............................ CGCTTTGAGTTCCGCTGGGAAGATCAGTTTAA 506424 28 100.0 32 ............................ GCACCACCAAGACCCCACGCCCCTTCTTTCAT 506364 28 100.0 32 ............................ AAGTGGTAGATTCTTTGAAAGTGATCGCGATG 506304 28 100.0 32 ............................ AATTAGATATGGACAAGATCATTTACGCGCTC 506244 28 100.0 32 ............................ CCACAATTCGAGGCTGCATTTCGTGCGCGCAT 506184 28 100.0 32 ............................ AGAAAAACGAAAAGATGCCAGAGTCGCGAGAG 506124 28 100.0 32 ............................ TGCTATAAATCCTGCTGCTTTTTTTGCAAGCC 506064 28 100.0 32 ............................ GCGAGAAAAAAAGGCGCGGGGGTCGTAGACTC 506004 28 100.0 32 ............................ TTAAAGAATGGCGCCATTGCTACTGCGCTGTC 505944 28 100.0 32 ............................ ATTCTGACGCATTATCCACAGCTTTTTGTGCG 505884 28 100.0 32 ............................ ATATCCAAGGTGGTGGATTTTTTAAATATAAA 505824 28 100.0 32 ............................ AATGAATATGAAAGACCGAGATTATATATGGC 505764 28 100.0 32 ............................ TTTAAACTCCTTGTAATCCCACGTGTTTGGCT 505704 28 100.0 32 ............................ GTCAAAGCCAAATGGCTTATCGCTTGTTAGAA 505644 28 100.0 32 ............................ TGCCGCGTATGCAGCAAAATATGTCTACCCTC 505584 28 100.0 32 ............................ TTGTTGAGAATGAAAATAATGATCCGAATTTG 505524 28 100.0 32 ............................ CAATAACTTCTTGATTGGATTGTTGATGATGT 505464 28 100.0 32 ............................ CAAAAGATAATCCATACTGGCATTTGCACTTC 505404 28 96.4 32 .............T.............. AATATCAAACGCCGTTTTGCCGTCCTTCATAG 505344 28 96.4 32 .............T.............. GTTGAACTTACCACCCATACCGGCGATAACGC 505284 28 96.4 32 .............T.............. CTCTAAATCCACTACCATATTTTTATCAATGC 505224 28 96.4 32 .............T.............. TCTGCATGATCGTAAAGATTGCTATTCCCTGC 505164 28 96.4 32 .............T.............. AATCGGCATTAAACGACTTCCAGCCTCTCGAG 505104 28 96.4 32 .............T.............. ACCATTGCCTGATAACTGCCAGGTGCGCGCAG 505044 28 96.4 0 .............T.............. | ========== ====== ====== ====== ============================ ================================ ================== 25 28 99.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATGATTACAAGCATTATGGCAGTTTTAACAGGTTGTGCTTCTGTTGAGCAAGATACCGTGGTGCATGATTTTACTGCATATGGCAAGCTCAATGAGCCTTGGCGCATCGTGGTCAAGCATGATGATCAGTTAGAGATTGAAGGGGTAATGGTTCGCGAGGGCACATTGAAAGTGACGCGATCGGCATATGCAAAAGGTGTTGAATTCTCAGGGGATTATGATGGGCAGCCATTGACATTAAACATCCGCTCATTGAAGTGTAAAGACAGCAATGGCGATGAAACAGACTTCACAGCCATGTTCTACTATGGCAAACGTACTTATAAAGGTTGCGCGGTTGCAGGTGCGATTGAGCATGCGGACACTTAAGACCTTTATGGTTTGATCTTTAAAAATTTGGATAAATATCAGTAAATTACATGTCATTGGAAAAGGATTGGTTTTATGGCTATAAACTGCCGAAATCATGATGTTTCCAATGGCATTGTTATATTTTTAAA # Right flank : GACCGGAGCTGTGCCATCGTAACGGGATTATGAACAGACAGTAAAACTAATTCGTTAAGTTACTCACCATAATACGCCCAAAGCAGGACAGGTTTTTTCTTGGTTTGTAAAAGCTTGTCCACTTTGCGCATTGTGTCATCATCCACAACCGGGCAGCCTTGGCTGAAACCTAAAGGCAAATAGTTTGGGAAAGTTTCTTCATTCGGAATCATCTTAAAAGAGTGGAGCACAATGTAACGCTTAAAGGCATTGCTGTTACTCGCCTCTAGTCCATGGAGTTTGTAGTGAATGCCAATTCCCCATTTGCTCGGTGCGCGGATGCCCACACGGTATTTACCGAGAGAAGATGCATAACTATTCGGTTGATTGCTAAAGACAATGTTTTGATTATCACTCTCAAAGCCTACATTGCCATAACCATGGGCGACGATGCTTTTGATCTGCGGTGATTGTGTTTTAAAATTCCACACAAAAAAGCGATCTTTACCAGAATGGCGCGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //