Array 1 3531171-3532406 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACFXW010000001.1 Rhizobium sp. G21 1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                           	Insertion/Deletion
==========	======	======	======	=================================	==========================================	==================
   3531171	    33	  93.9	    33	A.....................G..........	ATCGTTATGTTTGGGCAATGGTATGGGCAAGGG         	
   3531237	    33	  93.9	    32	A.....................G..........	GACGCGAACCGATACGTTGACGGTAAATACGT          	
   3531302	    33	  93.9	    32	A.....................G..........	ACAAGCGCGACAAGCTGCGGGAGGTAGTCAGA          	
   3531367	    33	  93.9	    34	C.....................G..........	GCTGGCAATGCTCCGAAAGGGAAAGCCGATAACA        	
   3531434	    33	  97.0	    34	......................G..........	GTCAAATGCCTCGAAAAAACCCCGTCCTATTTCT        	
   3531501	    33	  97.0	    34	C................................	AATACCATGGCTGCGGCTGGCCCAATTGGCGCGA        	
   3531568	    33	  93.9	    34	T........T.......................	ACCTTTACGTGTGATCGTCGCGCTCTTGCCGTTG        	
   3531635	    33	  97.0	    33	C................................	TTGCTCAGGACATCGTTGATCTGTCCGTTGATC         	
   3531701	    33	  97.0	    33	T................................	GCCGCCATGCTCGCCACCCAAAACGTGCGCGAG         	
   3531767	    33	 100.0	    33	.................................	CAGCTTATAAAAGTGATGATCGGTCAGGACGGC         	
   3531833	    33	  97.0	    33	T................................	GCCACACCGAGCATTTGCTGGTAGAGGTTCCAA         	
   3531899	    33	 100.0	    42	.................................	AAGAGCGTGTCTGGCACAGCTATCAGGCCGAAGGGCGGCGCG	
   3531974	    33	  97.0	    34	T................................	AAGGGCTGCGCAGGCGAGGGCGATGTATCGCTGG        	
   3532041	    33	  97.0	    33	A................................	GCTGCTGAAAGTGCAGGCGCGCGCGCCAGGCTC         	
   3532107	    33	 100.0	    34	.................................	AACACGCGGGCGTAAGCCGCGATCTCACGGGCCT        	
   3532174	    33	  93.9	    34	T........A.......................	GGCTTTGCCCAGGGCGGCGTGTTTTCGGGCGGCG        	
   3532241	    33	 100.0	    34	.................................	ACGACGTATGACGACGCCACCGCGTCGTTCGACA        	
   3532308	    33	  97.0	    33	C................................	GGCTGGGCGCTGCTGCCGGAGCGCGTGCTGGCC         	
   3532374	    33	 100.0	     0	.................................	|                                         	
==========	======	======	======	=================================	==========================================	==================
        19	    33	  96.8	    34	GGTCGCCTCCCTCGCGGAGGCGTGGATCGAAAC	                                          	       

# Left flank :   CACCTATGACGTCCGCACGCTCGAAGGCAATGGACAGGCGCGGCTGCGGGCCGTCGCCAAGGCCTGTCGCGACTATGGCCAGCGGGTGCAATTCTCCGTCTTCGAGATCGAGGTCGATCCCGCGCAGTGGATCAAGCTGAAGGCGCGGCTCGAAGGCATCATCAAGCCGGAAGTGGACAGCCTGCGCTATTATTACCTCGGCGCCAACTGGCAGCGGCGGGTGGAGCATGTGGGCGCCAAGCCCGCCGCTGACCTCAACGCGCCGCTGATCATCTGAGGCGTCAGGCGGTTTCCCCAGACGCCCCGCCTGGTGACAATTTCCGGCGCGAACCCCAAGCGCGCCGCAAAAGCCCGGCAGGTTCGCACCGGCGCCAGCTCTTTGAAATCGTGAATTGTTTACTGCGCGGCGTCATATCTCCGACAGCGTTTCGCCGCCCGACCGCCCTGTTTCGCGCATCGGCGCTTTGCATGCGAGCAATATCCGTGCTTTACACCCAGAC
# Right flank :  CATGAAAGCAACGACATCATCAGAGGCGAGGTCCGCGGTTTGGGAATGCGGAGCTCTATCGTTCCAGCCCCGTTCGGCGGAAAAGCGATTCACTGGCTCGTTTCATTGCGCCTCACCCCAGTCACGGTCGCGATAGCCGTTGCGCTGGGCAAGACGCATGGGGTTTCTTTCGGCATGCCCAGCGCCTGTCACAGCACCGACCTCCAGCACCATCAAGCGCTGGGCGGTGAAGCTGATCATCTCCCGCAATAAATCGCTGTCGGCGCTCTTCTCGACAAGCAGGCGCCGGCTCATCATCTCGTCGGTCATCGGTGGTGTCCTTCAGGCTTGTTCTCAGCAACCCGACCCTACCGGAAATCACCGATGGCTATGAAACCCAGCTAAACCGCTCACGGGGACACGATCGCTGCGTGGACTCATCCGCCATACTTCTGATTGGTGGATCGAGAACCGGAAGGAACTGACAGGCTCCTCCCTTGCGCTTCTCGGGCACATGTTCT

# Questionable array : NO	 Score: 5.48
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.38,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GGTCGCCTCCCTCGCGGAGGCGTGGATCGAAAC
# Alternate repeat :   GTCGCCTCCCTCGCGGAGGCGGGGATCGAAAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CGTCGCCTCCCTCGCGGAGGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.50,-6.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-1] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [43.3-45.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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