Array 1 173409-172384 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABIZE010000001.1 Streptococcus lutetiensis isolate MGYG-HGUT-00088, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 173408 36 100.0 30 .................................... CACTAAAACAGAAATTCAAGGTAACTATGG 173342 36 100.0 30 .................................... ACACTCTCCTTCGCCAAAATTTGAGTGTAA 173276 36 100.0 30 .................................... TTTAACAGACCCAAACGTTAGCACAGCCAA 173210 36 100.0 30 .................................... ACCAGCACTAGAGTCTATCACCAAACTGTA 173144 36 100.0 31 .................................... TTTTCGTTCCATTTCTTCGTAGCTCTTTGCT 173077 36 100.0 30 .................................... TGGGCTTCGTTGGGCGGATAACGAAATTTA 173011 36 100.0 30 .................................... AGCCAAAAAATATGTTGACGGCGTTCACGT 172945 36 100.0 28 .................................... GTGCTATGTGTCCGCAGATTGGTGCGAC 172881 36 100.0 30 .................................... CGCGACTTCGACTGCTAACTATCTAACGTT 172815 36 100.0 29 .................................... CTTACCGTATCCGCCACCGACCATTTTAG 172750 36 100.0 31 .................................... CCCATAATGTGGCTTTTTTTGATAATAAAGC 172683 36 100.0 30 .................................... CAAAAATTCATCATCTCCAGCTTGTATGGT 172617 36 100.0 30 .................................... TGACAACTTAGACGGCATGTTCAAACATTT 172551 36 100.0 30 .................................... TTCGAAGTGACTTCAATAGAATCTGCAGAA 172485 36 100.0 30 .................................... CTTATAAAAATTGTTCGAAGTCTACCTCAC 172419 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 16 36 100.0 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AAACTTTCTTTATGATTAAACCAGATGGCGTGAAACGCGGACTTGTTAGTGAAGTACTTAAACGTATTGAACGTCGTGGTTTCAAAATTGAAAAATTAGAAATGCGTATGGCAACTCCTGAGTTGTTAGAAAAACACTATGAAGACTTGGTTGATCGTCCATTCTTCCCACTAATCATTGACTTTATGACAAGTGGTCCAGTGATTGCTGGTGTTATGTCAGGAGAAGAAGTAATTACTTCTTGGCGTACAATGATGGGTGCAACAAACCCTAAAGAAGCTCTTCCAGGAACAATCCGTGGTGATTTTGCTCAAGCACCAGCTGAAGGTGCTGCAACATTTAACATCGTTCACGGTTCAGATTCACCAGAATCAGTAGAACGCGAAATTGCCCTTTGGTTTGGGGAATAAAATAATTAAGTATGGAATTATTCGGAGCTGAAGTCAGGCTGAGACAAATGGCGCGATTACGAAATTTCGTGAGAAAAAATGGTCCACGAG # Right flank : TGTGGCTACTAAATATGAATACACCAAAACCCCACCTAGTTCGTCACTGGGTGGGGTAATCTATGTGGGTCATAGGTTTGCAGAATTGAGTTTTTATTACCTTTGATTAATAATAACGCTTTCTGCAAAAATTGTAAAATGATTTGCGGTAGCTGATTTTAGCGATATTTATCGTGCCTAGAAAACTTTTTATAGCACCAGTGGTGTTTATTTGTTATAATAGAAATAATGAATAATTGTATAGGATTATAGATAGATGGATATTCAAGAATTAAAAAAACGACAAGAAAAGATTCGCAATTTCTCAATTATTGCGCATATTGACCACGGAAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACTGAAACTGTCTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGTATGGATTTGGAACGTGAACGTGGTATCACAATCAAATTGAATGCGATTGAGTTGAATTACACAGCTAAAGATGGTGAAACTTACATTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 174251-174013 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABIZE010000001.1 Streptococcus lutetiensis isolate MGYG-HGUT-00088, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 174250 36 100.0 30 .................................... TGACAGGCTACCACACACGTCCTACTGTCA 174184 36 100.0 30 .................................... CGTATTCATCTATTACAAGCAAGGCGGGTT 174118 36 100.0 30 .................................... CCTTAATCTAATAAACTATAAAATTATCTA 174052 36 83.3 0 ....................T...AAAA.......A | TT,T,T [174015,174019,174021] ========== ====== ====== ====== ==================================== ============================== ================== 4 36 95.8 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : TTTTTCACAAAGAAGAAGGTGGAAGTTTTTGGGTAGAATTTCCAGGATTCGGTGGTGAAACTGAGGGTAAAGATATCGAGGAAGCTATGAAGAATGCACGTGAAATGCTTGAGAGTCGTTAGCTGCGTATTTAGATGAAGGACTTGCTCTTCCAAAAGTTATTGATATGAGTGAGTTAACCGTTGATGATGGCTTCATTACTCTGATTCAAGCTGATCCTTCACCGTATTTAAAAAAGACAAAAGCTATTCGTAAAAATGTTACGGTAGCAGAATGGTTAGTCAGATTAGCTGACTGTGAGCAGGTAAACTATTCTGAGGTTTTAACAAAAGATTTGGAGAAAAAAGTTGCAACTATAAGTTTTAAGATTGTTCAGGAACGTTGAAAAATCAAGGTTTTTAAGGTATAATAAAACTAACATTATGGAGCTGTTCGAGACTGAAGTCTGGCTGAGACAAATGGCGCGATTACGAGATTTCGTGAGAAAAATTGGTCCACGA # Right flank : ACTGTAGTAAAAATTACTTTCAATGTTTTTCAAAAGTTTTCTTTTATGGTAAAATTGAAAGTGAATTTATTTTAGTTAGATAGGTTGGATTGTTTACATGGAAAAAACTTTCTTTATGATTAAACCAGATGGCGTGAAACGCGGACTTGTTAGTGAAGTACTTAAACGTATTGAACGTCGTGGTTTCAAAATTGAAAAATTAGAAATGCGTATGGCAACTCCTGAGTTGTTAGAAAAACACTATGAAGACTTGGTTGATCGTCCATTCTTCCCACTAATCATTGACTTTATGACAAGTGGTCCAGTGATTGCTGGTGTTATGTCAGGAGAAGAAGTAATTACTTCTTGGCGTACAATGATGGGTGCAACAAACCCTAAAGAAGCTCTTCCAGGAACAATCCGTGGTGATTTTGCTCAAGCACCAGCTGAAGGTGCTGCAACATTTAACATCGTTCACGGTTCAGATTCACCAGAATCAGTAGAACGCGAAATTGCCCTTT # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //