Array 1 252081-253701 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKOZ01000005.1 Lacticaseibacillus rhamnosus strain BIOML-A5 scaffold5_size281262, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 252081 36 100.0 30 .................................... AAGAAACGATCCCGAGTTTCTGGATTGCTT 252147 36 100.0 30 .................................... TCATCAGTATTCATGGAAATATAGGATGCT 252213 36 100.0 30 .................................... ATCATCGAATCTTTGGGGACCTTACCACTT 252279 36 100.0 30 .................................... GATTGTTTCGGTTGCTTCTGTGATGCCACC 252345 36 100.0 30 .................................... ATGACTGGTTGCCGGTAAGCGATGAGTTCA 252411 36 100.0 30 .................................... CATACTTGTATGAGCACTTTGACTTGTCAA 252477 36 97.2 30 ....................T............... ACCGTTTGTGTTGCATGAATATGATCACTA 252543 36 100.0 30 .................................... AGGTGCTATGCCGCTTGGCATGACGATTGA 252609 36 100.0 30 .................................... AATAATATTGTGCCAAAAGGTAGTATTCTA 252675 36 100.0 30 .................................... TCCAAGGGCATTCCAGATTGCAGAAGCCCC 252741 36 100.0 30 .................................... GGGTGATGCTGACAAGATCAAGACGGCTGT 252807 36 100.0 30 .................................... CGCCTTACGGGCGACAGCTAGGCCTATGGG 252873 36 100.0 30 .................................... AGATCGAGCATTACGGCTTGCAAGACTGCG 252939 36 100.0 30 .................................... ACAGTTGAGAAAAGAAAATACGCATTTAAA 253005 36 100.0 30 .................................... AAAAACACAAATGGCCGCTGCCACCTTATG 253071 36 100.0 30 .................................... AAAAAAGCCGCGGAACTTCTCGGGCTAGAC 253137 36 100.0 30 .................................... CACAGTGCCATTCCACAAACCCGACAGAAA 253203 36 100.0 30 .................................... CGAGCTTGCGGCCAATATCAAGCTATATGC 253269 36 100.0 30 .................................... GTGTGATCATCATTACCTCTCTGCCACTAA 253335 36 100.0 30 .................................... ATCGCATACTTCATGATGATTGATGCCAGT 253401 36 100.0 30 .................................... CTGTGTTCTCACGTGTCAACAATTATTTCA 253467 36 100.0 30 .................................... TTGTGGTGCCAAAACGGGTTGTTGTCGAGA 253533 36 97.2 30 ...................................G TTTCAGCAAATATGACGTCTAACATGCCTC 253599 36 94.4 30 ..................................AT ACTTGGAAAAGTTGCTATGCAGTTTGAATA 253665 35 83.3 0 .......................AA.C...-..T.A | AA [253686] ========== ====== ====== ====== ==================================== ============================== ================== 25 36 98.9 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Left flank : GAGCTGGATTTGGACAAGTTATTCCAACGCTTGATCATCAAGAAGGTAAGTCAATTGATAGAGGATCGGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTAAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTGAACAAGCTGTTAGATCAGGTTAAGGAAACATCGTTAGAATTACTTCTCATTGAATTTTCGGATGTCGAACGTAGAAAGTTTTTTGAGAGGTGCCAGTATATCTATATTGACAAAGATTTCATGGATAGCCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : AAACCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTATCAACAGGCGTTCAAATCCATTTACGACAAATATCAAGATCGGGAAACCAACCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAAGTTCAAACGGCATAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGTCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCTAAATTGGTACATTTGTATCGTAAAGTCGGCTTTCAGCAGCTGCCAGATCGGGAAACAACGATTAATGAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //