Array 1 404800-402635 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYOX01000005.1 Photobacterium angustum strain A2-2 CFSAN065424_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 404799 29 100.0 32 ............................. GTTTGGAACATCCTCACCATCAACAGCATCTG 404738 29 100.0 32 ............................. ACTTGGTAATGAAGAAGCATGACCAAGGAAGA 404677 29 100.0 32 ............................. TTGATTTGAATTAGTTAATGCATTTTTGAAAA 404616 29 100.0 32 ............................. TGTCCTCAATAACCGCGTCAAACTCAACACCG 404555 29 100.0 32 ............................. TGTGGGCGCTTTAGATGGTAATAGTGTCGTAA 404494 29 100.0 32 ............................. CTGTTTGACTGTATGCATTGTACCGTTCCCAT 404433 29 100.0 32 ............................. GTCTGATTTATCCGCACGTGAGTATATAAAGT 404372 29 100.0 32 ............................. TTTACAATGATTTAATTAATCATAATAAAGCA 404311 29 100.0 32 ............................. AACGCGCGAACTATCTTAAAATTATGATTGAA 404250 29 100.0 32 ............................. TTCACCAAGTATATTATGAAATATGCTGAGAT 404189 29 100.0 32 ............................. ATACGATCAAAAACATTATTAATATTGCAAAG 404128 29 100.0 32 ............................. AGGATCACCCTTGATAATAAATCTAGGTTAGA 404067 29 100.0 32 ............................. TTATAAACCTGACGGTCTGTTAAATGCTGAAT 404006 29 100.0 32 ............................. AACATTCACAACAATTTTGAGTGATAGAGATA 403945 29 100.0 32 ............................. CATTTAGTGATAAAAAATAAGGTTGGCTACCA 403884 29 100.0 32 ............................. CGCATTCAGCTTTCAGGCTGCATCAGTGAAGA 403823 29 100.0 32 ............................. ATTCTGATAAACGCCACCGTTGTCATCATTAA 403762 29 100.0 32 ............................. TACAGACTATAACAGCCGAGGATATAGCGAAT 403701 29 100.0 32 ............................. GGATTGCGGAAAATTTCATATCAAAAACGCAA 403640 29 100.0 32 ............................. ATCGTGCGGGTTTTATTAGTCGATACCGTTAT 403579 29 100.0 32 ............................. TAGTGGTACTCAGTATCATTGACAAAACCGAT 403518 29 100.0 32 ............................. TATCTTTTAACGATTGGTTAGCGTTTCGGATA 403457 29 100.0 32 ............................. GGAAATCCCCATGATGAGAATATTGGACCTAA 403396 29 100.0 33 ............................. ACATCGGCACCTAACAGTTCACGCAGCTTTTGA 403334 29 100.0 32 ............................. CTACTAAATAATTCCTGGCTATCTAATTCACC 403273 29 100.0 32 ............................. ATTAAAAACATTTAACTTACGTGACACGAAAT 403212 29 100.0 32 ............................. GTTCGGGCTATTTACGCATTCGTGATATTGCC 403151 29 100.0 32 ............................. GTTAACAAGGCTAATTGTATTGGTGAGATCAT 403090 29 100.0 32 ............................. ACGGCACATTTAGTATTAATCAAACCCCTTCA 403029 29 96.6 32 .............T............... ATCTCGGTATTGTATCCACGTATCGTGACGAT 402968 29 100.0 32 ............................. GGATTTTATACACTTCTATGATTCCGATTTAT 402907 29 82.8 32 ..........T.T.T........G....C TTACCAGGAATCAGCTTGATTGAGGCTTCAGT 402846 29 79.3 32 ..........TG..TA.......G....T ATGCAAATAAAACTTCTATCCAAATCGGCTGG 402785 29 86.2 32 A.........T.T...............T CATGACTCTATAAACAGGATAAAATTCATCAT 402724 29 75.9 32 ........T.TCTT.A.......G..... CAAAAAGCGTAACAAACAAAAGCGAGGCGGAG 402663 29 72.4 0 .C......TTT.T..A...........TA | ========== ====== ====== ====== ============================= ================================= ================== 36 29 97.0 32 GTGTTCCCCGCACCCTCGGGGATAAACCG # Left flank : CACTTATCGATGAAGTACTCAGTGCGGGAGATATTACAGCTCCTGAACCTTATATAGATGCGCAACCTCCTGCTATACCAGAGCCAATTACGATTGGTGATAGTGGCCATAGGAGCAAATAGTTTATGAGTATGCTTGTTGTGGTTACTGAAGTGGTACCGCCTCGATTACGAGGACGTCTTGCAGTTTGGTTATTAGAAGTTAGGGCTGGTGTATATATAGGGAACGTTTCTCGAAAAATCAGAGAAATGATCTGGGAACATATTGAATGCCTTGCTGAAGATGGCAATGTTGTAATGGCGTGGGGAACCAATACCGAATCAGGTTTTGACTTCCAAACTTATGGCAAAAACCGTCGAGAGCCCGTTGATTTAGGCGGGTTACGTTTAGTGAAATTTTTACCTGCAGACATGATTACTGAATGAAAAAATGTTCTTTAAAAAGTTGGTAGATCTTCAATGGTAGTAATTTACCTTTAAAATCAATATATTGTATTTAGA # Right flank : ACCAAATTTACCCATTCAATATCGGGGTTTTGATTAGATGTTTTAGGTTGAAGTCTTATAATTTTTTGTGTGTAAAAAGCACTCATAAAGTGTTGAACAAAATAAGAAGATAAATGGCTTTAAAGCTCAAATTTTATGAGAGCTTATACAAATTTAACATTCATAAATAACTTAATTTTGTTCTATTTCTTTTTTAATTCAATAGCGTGTTGGTTTAAGCCTTAAGTGTATTCTTTTACGTGAAAGTTAGAATACTTATTTGCAAGGTTGTTAAGTGCCCATTGAGCTGTAGGACTATGACGAATAAATATGAAATTATTTGAGACTATTTCTCTGAAATTCCCAGAGATAAACGATGTAAATTGCAAAATTCACTTGGCTGTATGGAACGGAAAAGATAATCCACTTGATATTTTCTTAGCTGGAAATTTTGAAGAATGGCAACGCTGGCAATCTAAGCGTAACTTCGAAAGAGAGTTCATTGTTTCACTGATTCAACT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCCTCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACCAGCGGGGATAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.70,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [31-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //