Array 1 256165-256316 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI911459.1 Streptomyces sp. CNH099 B121DRAFT_scaffold_1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 256165 30 100.0 31 .............................. GACGCCCTGCGGATAGACCTTGCCCGCCTTG 256226 30 96.7 31 .............................G AGTCGGACTACTACACGGCGGTGGACGACAA 256287 30 90.0 0 ...........................TTT | ========== ====== ====== ====== ============================== =============================== ================== 3 30 95.6 32 CTGCTCCCCGCGCACGCGGGGATGGACCCC # Left flank : GACGTGGCGCTGGTCGTGGCCGCGGACGTCCCGGCGGCGAAGGTCGCCGATGCGCTGCGCGCGGGCGCGGGCGAGCTGCTGGAGTCGGTGCGGCTGTTCGACGTCTTCACCGGCGAGCAGGTAGGCGAGGGCCGCAAGTCGCTGGCCTACGCACTGCGCTTCCGCGCCCCGGACCGCACGCTGACCGCCGAGGAGGCGAGCGCCGCCCGCGACGCGGCGGTGGCGCGGGCGGCGGAGGAGGCGGGGGCGGTGCTGCGGGGGGCGTGACGGGCGGGCGCGGCACGGCGGTACGGGGCCCGTACCGCCGTGCGGGGGCCGTGTCGGCGCCCTGGCCGCTCGGGTGCGGTGTGCGGTCCCCGCCCCCTCGGTGAAGGTGAACTCGTAGCATGGCGTCAAGAGTTGGACGTCGCACACGAGGATGTTCGGTGGTGGAAATGTCCGAATCTCCATTTGTTGCTCAGGACGGCCGCCCCGCTGGATAAACGCCCAGGTCAGCGAGA # Right flank : TCCATGGCCGCCGTCATGCCGGCGCAATGCTCGCGCGCATGGCACCGCGGCGCTGGTCGACATCGGCGCCGTGGTGATCGACACTCGTCCGAGGCCACCCCGCAAGTCAGAATGCACTCATCCCCACACCGGAGGTTCCATGCCCAAGGGCTACTGGGTCAGCGTCTACCGCACCATTTCGGATCCCGAGAAACTGGCCGCCTACAACGAGCTGGCCCGCCTGGCCGTCGAGCCCGGGGGCGGCCGGACTATCGTCCGTGGCGGTCGGGTCGTGGCGTATGACGCCGGAATCGCCGAGCGCACCGTCGTGGTCGAGTTCGACAGCTTCGAGCAGGCCGTCGCGGTGCGCGAGAGCGCGGCCTACCAGGAGGCGCTGGCCGCCCTCTCCGAAGGCGTCGAGCGCGACTTCCGCATCGTCGAAGGCATCGACTGACCCATGTCCTGGCCGGAGGTCACGGTGGTTGATGCGTGCGTGCGGCGCGACGGCCGGGGTGGTAGCC # Questionable array : NO Score: 3.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 217-4 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZWL01000023.1 Streptomyces sp. CNH099 B121DRAFT_scaffold_21.22_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 216 30 96.7 31 .............................T CAGCGTGTGGCAGGGTCTCTCCGCAATCTCG 155 30 100.0 31 .............................. TCTCGTAGGGCGTGGTCTCCATCTCGGTCTG 94 30 100.0 31 .............................. CGCCGAGCCTCAGGTGCACACTGCCGGTACG 33 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =============================== ================== 4 30 99.2 31 CTGCTCCCCGCGCACGCGGGGATGGACCCA # Left flank : CCCGCGCCGGTCCTCCGCCGGGGGAGGGGAGGCGTCCGGTCGACTCCGTGACAGCCCGAGGTCGTACCCGGCCCGGCCCGGTTCTTCGGGCCGCATGCGCGTGTCCGCGTGGACCACGGCCCTGACCGACCGGTCGCGGGGTTCGCGGGCACGGTCTGTGTCGCCGGTCGGTCGTAGTCCCGTGCCACGGGGGACAGGACGAGTCCGCAGGTCGCCGTCGGGACTACCGCGCCGCGTACGCGATCAGCGCCGCGGGCGCGGTCGTACGGAGGGTGGGCGCCCTGTGCCGTCGTGCGGCCTGGTGGTCGCTGCCCTGGCAGCTTGAGTTCGGTGTGCGGTCCTGCCCACTCGGTTGAAGCTGAACTCGTAGCATGGTGTGGAGAGTTGGATGCCGCATACAGGGGTGTACGCAGGCTCCTAGCTCGTTGGTGGAAATGTCCGAATCTTCATTTGTTGCTCAGGACGGCCTCTTCCTTCGATAAACACCCAGGTCAGCGAGC # Right flank : ACGC # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 6275-5879 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZWL01000023.1 Streptomyces sp. CNH099 B121DRAFT_scaffold_21.22_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 6274 30 100.0 31 .............................. CCCACATGTCGCGGTGGCAGATCAGGATGGC 6213 30 96.7 31 .............................C ACTTGGCGCGGATCATCCGCGAGATCGAGGA 6152 30 96.7 31 .............................G AGACCGAGCAGCGCACGCAGATCGGCAATGC 6091 30 93.3 31 ..........T..................A CGGCCGGGTACGCGGTCATCGAGTCGAAGAA 6030 30 93.3 31 .......T............T......... GGTTCTGCGGCGCCGGCGGCTCCAGCCAAGG 5969 30 93.3 31 .........................C...A GCGCCACGAGGGTGGCGATCTCGGCCGGGGT 5908 30 96.7 0 ....................T......... | ========== ====== ====== ====== ============================== =============================== ================== 7 30 95.7 31 CTGCTCCCCGCGCACGCGGGGATGGACCCT # Left flank : ACACCTTGCGCCGCGGGCCGCGTACCGGCGCGTCCTCACGCTCCTGGACGACCAGGCCCGCCTTTTCGAGCCGGGTGAGGGTCACGTAGATCTGGCCCGCATTCAGCGTCTCGCCCAGCGGCCCGAGCGCGGCGAGCAGCCGCGCGCGCAGGTCGTACCCGTGCGACGGCTCCTTGGCCAGCAGCGCCAGCACCACGTCCTGCATGTGGGAATAGATAGCGGTTAGGCAAAGGCCAAGTCAAGCCGAGCTGCTCGCGGGCATCGAGCGCCGGCCGGGCGGCTGCCCCACCCACCACCGCCGGGCGTTGCGGACACGTCCTCGCCGGTCGTCCGCCGGGGAAGGCGACGGCCCTCGCGGTTGAAGCCGTAGCATGGCGTGAAGAGTTGGACCTCGCGCACCAGGGTGTACACAGGCTTCTCGCTCGGTGGTGGAAATGTCCGAATCTTCATTTGTTGCTCAGGACGGCTGCTTCCTTCGATAAACACCCAGGTCAGCGAGA # Right flank : TCACCCCCGCCGCTGGACGGCGTTCGTCACCGTCGTCAGGCACGCGGAGTTCGCCACGCCCTGATCGTCTCGCCCTGTCCGTCGGGCTGCGCCTCCACGGGCAGCTCACCAAGTACGGCAGCCGCGATGCCATAGGGATTTCCTATGTCGCCTGCTGATATTTCGTCTTTGCTGCTCGTTCTTTTCCCGGCGTACCGTGAAACGGCGGCTCGACGAGGTGCACACACCCGCGATTTTTCATGAATTCGCGCGGCGTGCACGTCGATCCTTGTTGCGCCGATCCAACGGGAACGCAATCGAGAGGACCAACGGCATGACCACGGTCGAGAACGGATCTGGGGCACCTGCACTCAAGGGAAAGCGCGCCCTGGTCACAGGTGGTTCCCGCGGAATCGGGGCGGCCGTCGTGCGCCAGCTCCTCGACGCAGGCGCCGAGGTCCTGGCCACCGCCAGGTCGACCGCGTACACGGCGCCGGAGGGCGCCGCCTTCGTGACGGCCG # Questionable array : NO Score: 3.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 12647-12434 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZWL01000023.1 Streptomyces sp. CNH099 B121DRAFT_scaffold_21.22_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 12646 30 96.7 31 .............................C GTGCCGTCGTCGTTCCGGCCGGTACCGCCCA 12585 30 96.7 31 .............................A ACCCGGAACGCAGCGCCTCCTGCGCACCCTG 12524 30 100.0 31 .............................. CGCCGAGCACCGCCAGGTCGGCCAGGTTCCA 12463 30 93.3 0 ........T........A............ | ========== ====== ====== ====== ============================== =============================== ================== 4 30 96.7 31 CTGCTCCCCGCGCACGCGGGGATGGACCCT # Left flank : TCGCGTGATCCCCGGTGCCTGTCTTTTCGCCGTGATGGGTGTGCCGCGAGGATCAGGACGAGTCCGCGGGAGGCGACCAGGATCCAGCCGCCCGGGTGAGACGCGTGTGCGTGCCCGGTCAGGTTCGCCGCCGCGCCCGGCGCCGCGCCGCTGAAGGCCGGGCGTCGGGACAGGCGCAGGTTGATCGGCGGCTTGCGTCGGCGGGACTCGGTCGCCAGGAATCCGGCCGTCGTCGTCGGGGCCATCGGTATGCGGGCGCAGCCGTACGGATGGTGCGCGCCCCGTGCCGTCGTGCGGCCTGGCGGCCGTGGCCCTGGCAGCTTGAGTTGGGTGTGCGGTCCGGCCCACTCGGTTGAAGCTGAACTCGTAGCATGGGGTGAAGAGTGGACCCTCGCACACGAGGATGCACGCAGACTCCTCGCTCGGTGGTGGAAATGTCCGAATCTTCATTTGTTGCTCAGGACGGCTCCTTCCTTCGATAAAGACCCAGGTCAGCGAGA # Right flank : TCACCCCGCCGCCTGGACGGCGTTCGTCACCGCCGTCAAGCACGCGGAGTTCCCCACCCCCTGACCGTCACGCCCTACCCGTCCGGCAGCGCCTCCACGGGCAGCTCCCAGGCGCCTGCCTCCGACCCGTTACCCTCGCGCAGGGCCACGACCTGGCTTCCTGGCTCTGCCGCGAAGGTGAAGCGCGTCCAGTCGGGCTTGCGGTGTGTGAGCCACACCCGGTGGGCTTCTTCGACGGCGTCCCAGAGCCGGTGGGGGCCGCCCTGTTCCATGTAGCGGTGGCCCGCGTCGTCGGGCGCGTATACCTCGGCCCACGAACCGTCAGCGGTCCGTAGCCCGAACAACTCCCGGCCGTCGTCACGGGTGGCCGCGTAGCGGCGGGCGCCGGGCAGGTGCAGTTGGGCGAGGAAGGCGAAGGCGTGGTCGTCCAGGACGGCGGGATCCAGGGCCGTTTGCCCGGTGGTGTACTCGCGGGCGTACGGGGCGAGCGGGGAGTCGGC # Questionable array : NO Score: 3.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 6-157 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZWL01000031.1 Streptomyces sp. CNH099 B121DRAFT_scaffold_29.30_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 6 30 96.7 31 .............................A CGCCGAGCCTCAGGTGCACACTGCCGGTACG 67 30 100.0 31 .............................. CGGCCGTGCGCTTCACGTCGAGGAACGCCTT 128 30 93.3 0 ............................GG | ========== ====== ====== ====== ============================== =============================== ================== 3 30 96.7 32 CTGCTCCCCGCGCACGCGGGGATGGACCCT # Left flank : GTACGC # Right flank : GCTACGTGAGTTCCAGGCCGCCGTCGAGGGTGAGGACCTGGCCGGTGAGCCAGGTGGTGGCCGGGTCGGCCAGGCGCAGGATCCAGGTGGCGACCTCGTGTGGCTCGCCGCGGCGGCCGAGGGGGATGCGGCTGGTCTCCTGCTGCTTGATGTGTTCGATGGCCGTCTCGGGCAGCCCGGCGGCGGCCAGGGCCTGGCTCTCGGTCGGCCCGGGGGCCACGGCGTTGACGCGGATGCCGTCGGCGGCGAGTTCCACGGCCCATGTACGGGTGAGCTGTTCAAGGGCGGCCTTGGAGGCTGCGTAGTGGGCGGCGCCGGGCAGGGGCCGGTGGCCGTAGGTGCTGGAGATGTTCACGATCGAACCGCGGCTCCGACGCAGGTGCGGCAGGGCTGCTTGGGCCAGCAGACTCGGTGCGGTGACGTTGAGGTCGAACAGTGCGGTGATGCCCGCGGCGGTGGTCTCGGCCAGCGGCATCATCTTCGTGGCGCCGGCGTTGTTG # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1411-1138 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZWL01000041.1 Streptomyces sp. CNH099 B121DRAFT_scaffold_35.36_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1410 29 100.0 32 ............................. TCAACCGGCAGTACGGGCCGCACAGCTTCGTC 1349 29 100.0 32 ............................. ACGTTCTGCGTGAGTACCACCTGGGTGATGCC 1288 29 100.0 32 ............................. TTGCTGTAGTTCGCTTGGGTGGAACTCCTTAT 1227 29 96.6 32 .T........................... TAGTGGCGTAACGCTTTGTGGCCGTGACCGCC 1166 29 82.8 0 .T.............G.C......G...C | ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.9 32 GGCGTCTCCCAGCGCACACGGGCGACGGG # Left flank : GAAGAACCTGCCGAAACAGATCAGGCGCAACCGCAACCGCGCCCTGCTCGACACCGGCATCGGAGCCGCCCGCTGGCAGCTCCAGAGCAAAGGCGCCTGGTACGGGACCACCGTCGTGGTCACCGACCGGCACGCACCCACCGGACGGCAGTGCTCCGCGTGCGGAACGGTAAAAGCCACACCGATCCCGCCCACGCAAGACGAGTACCGCTGCCCGGCATGCGGCACCAGCCTCGACCGGCGAACGAACACCGCCCGAGTACTGGCCGCCGTCGCCGCGCAACACCACGACGCCCCGAGTGGCGGGGAGTCGAAAAACGCTCGCGGAGAGAACACAAGACCCACTGCGCCTCGGCGCAATGGGCAGTTCTCGGCGAAACGAGAACCCCGCTCCCGGCCACCCGGCCGAGGTCAGACGGGGACCCCCGGAACGTAAGGTCCGGGCGTCCGTGCACCCCACAACTTCACAGCGGTCGGGAGAAGACACCAGCTCGGGAAGG # Right flank : CCGGACCCGTTCCGAGATGGACTACGCGCGTCTCTCCGCGTGCTACAGCCTGGATCGCAGGTGCTGTCGAAGCTGCTTGCGGTATGACACCGCGCGGATCACCGCCGACCGCGCGGCCGCTTACGCCTCCCTGTCGGGCTCACCGATCACCGCTGCGGCGGCGGCCCGACAACTCGTCCTCTCGTCTCGCGGTCTAGGACCTCGGGGGCGGGTCTGTCGTGGCCGGCGGCAGGGTCAGCGGCCAGTGTTCGGTGGGGGTGTCGAGCCAGGCGTCATGGGTGCCGGAGGCTGAGACGGTGATGCCGTAGTGGTCGAGGCCGGGCTGTCCGTGGTTGTGCCACCAGCGCAGGGCCGGGCCGACGGCGTCGGTCCACAGGCTGCGCGGGCCGTATTCGATGACGGTGTAGGGGGTGCGGCAGAAGGCGATTGCCAGTGAGCCGTGGCGGTCGCCGATGCGGATCCGGTCGGTGTCGTAGGGGTCGGTCGGGTCCCGGTAGCGG # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCGTCTCCCAGCGCACACGGGCGACGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 2849-1719 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI911460.1 Streptomyces sp. CNH099 B121DRAFT_scaffold_34.35, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 2848 29 100.0 32 ............................. AGGCGATGGAGCAGCACCGCGAGGCGCTGTAC 2787 29 100.0 32 ............................. GCGGCGTAGATGAGTTTGGTCTTCCAGTCCCC 2726 29 100.0 32 ............................. GCGGACGGCGGCCGGTGGGAGGTCATCCACAT 2665 29 100.0 32 ............................. GCCGTCCTCGTACTCGTCGGGCCACGGGTTGA 2604 29 100.0 35 ............................. TCAAAAACCCCCCCCCGTGAAGGGGGGGGGAGTGA 2540 29 100.0 32 ............................. GCGTTGCCACAAGCGCGGCACTGCCCCCACTC 2479 29 100.0 32 ............................. ATCGACCGTTACGCACGCAGCATGCGCGAGTT 2418 29 100.0 32 ............................. CTGACTACGATCTTGGTTGCGGCGTTCATGTA 2357 29 100.0 32 ............................. CTGGCCCGCAGTCCGCCACATCGTCTCCACGC 2296 29 100.0 32 ............................. ACGACCGGGCGGCCGAGCAGCGTCATGGGCGG 2235 29 100.0 32 ............................. CTGGACAGCGGCAGCGACTCCGTGAAGACGTA 2174 29 100.0 32 ............................. GTGTCCTGCGCGTACGACGAGATGCCCGAGCA 2113 29 100.0 32 ............................. GAGCACGAGTCGGACGTCCGCGACATGCTCGT 2052 29 100.0 32 ............................. GAATCCGCGCTCAAGCTGGACCCGTGGATTGT 1991 29 100.0 32 ............................. GCGTCCTTGGAGGTTCCCGGGGTTCTGTGGCA 1930 29 100.0 32 ............................. GAATCCGCGCTCAAGCTGGACCCGTGGATTGT 1869 29 100.0 32 ............................. GCGTCCTTGGAGGTTCCCGGGGTTCTGTGGCA 1808 29 100.0 32 ............................. CGGCCGGATGGTGCACGGCGTGCGATCAGCAG 1747 29 96.6 0 ...........A................. | ========== ====== ====== ====== ============================= =================================== ================== 19 29 99.8 32 GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CGCCGTCCGCGCCCGGAGCAAACCGATACACCGTCTCCGCCCGCACATCCCGAAAGATCTCCGGCACCTGAGCCTGGAAAGGAGGAGTAATCTTCCCAAGATCATGCAATCCAGCCCAGAACGACAACACCTTCCGTGCCTCGTCTACCGACAAGCCCAGTGCACCGGCGATCCGGCTGCGCACTCGCCGGCCGAGCACCACATCCCACAGCACAGCGAAGATCGCTGCGGCATCCAGCAGGTGGCAGACCACGGCATAGGGCCTGGACAGCCCCTTCTCCTTGCCCCATAACCGGCAGTCGACCGGAACAATCTCCGGGACCGTCTCCATACGTGCGTCCATAACGTCAGATCTACCAAGTGCCACTGACAACAGGCCCTTCAGTCGGCCACGAACCCCCAGGACACGTACCATCTGGACATGAGCAGCTCCGGATCCAACGCCCTCAGCCGCGGGTCACGAAACGGCAAAGCGCTCGTATAGACGCAGGTCACGAAGT # Right flank : CGGTCGCGGCGGCGGACGTGGAAGCTCGCCCGGTCCTCTCCGCGCGAGCGGAGGTGAGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCTCTCCGCGCGAGCGGAGGTGAGCCGACGNNNNNNNNNNNNNNNNNNNNNNCGTCCTCTCCGCGCGAGCGGAGGTGAGCCGCACCTGGCCCGCGCCGACGTCTACGAGCGCCTGTCCTCTCCGCGCGAGCGGAGGTGAGCCGCGGCGAGCGACGTGTTCATCACGGCAGGCGCGGTCCTCTCCGCGCGATCGGAGGTGAGCCGCTCGTCCAACTAGGTCACAGGCCCTAGTGGAGATGTGCGGCTATGCGTCCTCTCCGCCTCTCCGCGCGAGCGGAGGTCCCTACGCCCGACAGGCTTGCCGCCGCCCCGCCCTGAGCAGCACTCACCGACAGGCACCCGAACCATGGGCGAGTGAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 12525-12875 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI911460.1 Streptomyces sp. CNH099 B121DRAFT_scaffold_34.35, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ========================================= ================== 12525 33 87.9 28 AGG.............................T CGCCCCCGTCGGGCAGGACGGCGTCGTC 12586 33 100.0 28 ................................. TGACGGCGAGCGGGACCGCGGAGGCGGA 12647 33 100.0 41 ................................. AGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 12721 33 93.9 28 NN............................... TGCTCCAGCACGCCCCAGTTCTTGGTGC 12782 33 93.9 28 ..A.............................A ACTTCTGCTTGGCGACACCGAGGTCGAT 12843 33 97.0 0 ................................N | ========== ====== ====== ====== ================================= ========================================= ================== 6 33 95.4 31 GACGTTCGCTCCGCGCGAGCGGAGGTGAGCCGG # Left flank : GGATCGTCACCGACATCCAACAACTCCTCGACCCCGACACCGACCACGAATGCCCCGACCCCGACGAACAACTCATCGACCTCTGGGATCCCATCACCGGCCCCCTGCCGGGCGGCACCAACCACGCCGCCGACGAATAGCGGCCACCGCCACCCGGAACGGGAGATCCACACATGGCATCCATGATCGTCATCTCAGCCACGGCCGTCCCCGATCACCTCCGAGGCGCCCTCACCCGCTGGCTCCTCGAAGTCACCCCCGAGCTCTACACAGGCACCGTCTCAGCCCGCGTACGCGACGAACTCTGGACCGCCGTAGCCGCATGCACCCACGACGGCCTCGCCGTCCTGGCCTACCCCAGCGACAACGAACAAGGCTTCGAACTCCGCACCGCGGGCACACGCCGTCGTCACACCGTGGACTTCGACGGTCTCACCCTGATCGCCTTCCAGAAAAACAGTAAAGAAAACGCAAACCCACTCTAGAAACCCAGGTCGCGA # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACGTTCGCTCCGCGCGAGCGGAGGTGAGCCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.90,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 3 13696-13907 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI911460.1 Streptomyces sp. CNH099 B121DRAFT_scaffold_34.35, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13696 29 96.6 32 ..........................C.. TCGGCGGCCGCCGCGTGGCTCCGTGACCGGGA 13757 29 100.0 32 ............................. CCGAGATGCTCATGTACGCCCCCATCGGCGGC 13818 29 100.0 32 ............................. CGGGAGAACGCCGAGACCCGCCTCCAGCTCGC 13879 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 99.2 32 GTCCGCTCCGCGCGAGCGGAGGTGAGTCG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCGGACTCACTCCTTGTAGTGATCTCCGA # Right flank : GCAGCCCGCCGTAGACAGAGCCCACCAGACGGTGGAACTGAATCATGGAGTGACACCGAATGACTGATGTTGTACCCGAGGTTGAGAACGAGGCAGCCGCGGAGGCGGAGGTTGCTGGGCGGGAGCCGGTGGTGGACGACCAGCTGATCGGGACGCTGGTCGACCGGGCCCGGGCGGAGGGCCTGCGGCTGACCGGGGAGGGCGGGCTACTGCAGCAGCTGACCAAGCGGGTCATTGAGTCCGCCGTGGACGGCGAGATGACCGCCCACCTCGGCTGCGAGAAGCACGACGCGGCCGGCCGGGACGGCGGCAACTTCCGCAACGGCCGCCGCTCGAAGACGGTGACCACCGACGTCGGCCCGGTCGAGATCAGCGTGCCCCGGGACATTGAGGGCACCATCGAGCCGCAGCTGGTGAAGAAGCGGCAGCGGCGGCTGTCCGGGGTGGATGAGATGGTGTTGTCGCTGTCCGCGAAGGGCCTCACGCACGGGGTGATCTCC # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTCCGCGCGAGCGGAGGTGAGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,1.05 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], //