Array 1 8031-9980 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPKU01000002.1 Leuconostoc gelidum subsp. gelidum strain NBRC 113246 contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 8031 36 100.0 30 .................................... CACCCTTGGGTGCCTTTAATTCAGCAGGTA 8097 36 100.0 30 .................................... TATATGATAACTGTACTGTGTGTATTTCAG 8163 36 100.0 30 .................................... AATACAGATGAGTTATATAGGTTATTTAGT 8229 36 100.0 30 .................................... TAAAACATATTATCTTGAGCAGTACATTGT 8295 36 100.0 30 .................................... AGAAATAAGCAATCTGTCCTACCTTTGCAT 8361 36 100.0 30 .................................... TATCATGCATAGCTTGATACAACTGCCTAG 8427 36 100.0 30 .................................... TCAACGCGCGAGACTAGAGTTTATAATTCT 8493 36 100.0 30 .................................... AGAAATAAGCAATCTGTCCTACCTTTGCAT 8559 36 100.0 30 .................................... TATCATGCATAGCTTGATACGACTGCCTAG 8625 36 100.0 30 .................................... TTAACTTTAGGAAAAAATCAGTGAGCATTA 8691 36 100.0 30 .................................... CCGTTTCTGTATACAAGCCCCAGAAACGGG 8757 36 100.0 30 .................................... GCCAATATTTTAAAAATCTGCCTAGTTGTT 8823 36 100.0 30 .................................... TGGGCTGATAAGCAGAAAAACAACACGACT 8889 36 100.0 30 .................................... TTCACGCGTGGTTGAAGCTGTTTATTAGTA 8955 36 100.0 30 .................................... AAGCTGTTAATCCACTACCAGACACTTGAA 9021 36 100.0 30 .................................... TGCAATATATATTAGAGCCTATAATTCTAA 9087 36 100.0 30 .................................... CAACATCAATCAGTGGAGCGTTGACTTCTT 9153 36 100.0 30 .................................... AGTATAACGGTAGCTCCGTGATAATCTCAT 9219 36 100.0 30 .................................... AATTATATTAAACTTACTAAGTTTCATACA 9285 36 100.0 30 .................................... TTTAAACCGCGAACTTCTAGCAAAGCACTG 9351 36 100.0 30 .................................... CACGGCTAAAGCCAACAGTGACGCTAGTAT 9417 36 100.0 30 .................................... CTACGTACGTAAGGATAAGGACTCAGATAG 9483 36 100.0 30 .................................... TAGTAGCCAACAGTTCTATTACCAACTTGA 9549 36 100.0 30 .................................... ACTCAACTGGCTTTGAGCCATCAATCACGT 9615 36 100.0 30 .................................... GATCACGTATTGTGCTTCTTCGATTGAATA 9681 36 100.0 30 .................................... TAATACATTAGGTCAAGTGTATAAGTCTAC 9747 36 100.0 30 .................................... GCAAACGGATTGGACTTCAAGGCAAATTGC 9813 36 100.0 30 .................................... TCTAACATCTTCAACGTTTTCATTGAGCAT 9879 36 97.2 30 ...................................T CATTGGTCGCATCAGCAAGAACACCATTCG 9945 36 94.4 0 ..............................C...A. | ========== ====== ====== ====== ==================================== ============================== ================== 30 36 99.7 30 GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Left flank : GGTGCGCAACTTGATGTGAATAAGTTGTATCAAAAAAATATCGTTAATACAATGAAAAATTATGCAGATGATCAAGCGTTAGAAGTGTTTTATAAAATAAATTCCGAATTAAATCATGTCTTAGAAAACATTATATTAGAGAACAATCTGCCCTTTTATTTTCAAACAGAATTCAATATTGTCGAATTAATAAATGAGAAAAAAATTAGGATAGAAACACTGACAAACAGCTCTGGATTTGGTAAAATAGAAGATGTAGTAAGCGTTGCTGGTGAGTTTTCAGAGCAACGTTTAATCGTTTTTACGAATTTGTATTTGTTGTTATCGGTTGATCAGATTGACTATCTGAATAATCTAGCGAAGACAATGAATTTATGTTTAATTTCTCTTAATTTGACACAAAACCCTGTTATGACTAAACAGGGTCTACCTCCAGAAATCTTTATTGATGAGGATTTCGTTCAATTTGGTGCTGACTAGCTGATGCGAACAGGCGGTCT # Right flank : CTTATATACATGGCAATCTATATTGAAATTAAATACCATATTAATAAGATTAAAGCGCTTAGGCGCTTTTTATATGCCATACATGTCAAAAAAGAAGTTTACGCGAATAACGATTATGGTATGATATATTATGTTATAAATAATCACGTCAAACGTGAGATGGAGAAAGGGAGATTTTCCTGTTTTGGTAAATAAAAAATTGCAAGTGAAAGAATTACTTGTTTCAACAATAATTATTGGTGGCGTTCTGGGCACGATGTCTACGGTTAATGCTGCTGAAAATACAGCACATGTATCGACACAAGTGTCAAGTACAACCGTATCAGGTTCGAGTGCTGTATCACAAGCGCCAAGCACTAAGGCATCAAGTTCAACAATAAATGAGTCTAAAAAAAATGATAGTTATAATGTAACGCCGTCAACTCGATCTATTCAAATATCTCCAGCCAAATTTAAAACCGGTTCTGTAATCGCATTGACTAATTCAGCAAAAACGTCCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //