Array 1 517-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML123072.1 Streptomyces sp. ADI92-24 scaffold007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 516 29 100.0 32 ............................. ATGCCGTACTGGTCCTTCGCGTTCGCGTGGCC 455 29 100.0 32 ............................. TGTCGATACCTTGGTCCTCCGCTGGCGTTCTG 394 29 100.0 32 ............................. TTCAGGTCGCCCTGAACATGCTGGACGAGGGC 333 29 100.0 32 ............................. AGAACCCGGACCCGGAGGACGCCGAGTCCAGC 272 29 100.0 32 ............................. TGAGCACCGAGCAGTCTCCTGACCCGACCCCA 211 29 100.0 32 ............................. CAGAGGCCGAGGGGACCGGTGCGGCCGCCGAA 150 29 100.0 32 ............................. GCGGCGGGGATACGGCGAACTGGGGCCGGTGC 89 29 100.0 32 ............................. TCAATTTAGCTGTGCACGCTTGCATTCAGCCC 28 28 96.6 0 ............................- | ========== ====== ====== ====== ============================= ================================ ================== 9 29 99.6 32 GTCCTCCCCGCCGACGCGGGGGTGCTCCG # Left flank : CCGCGACGTCCAGAGGCTCCTGACACCACGCTCCACGAACGCCACCGACGGAGCGGCCGACGAAGAAGAGCCGCAGGAGAAGCGCGACGTCAAGATGGTCCACCTCTGGGACCCCAAGGCCGGCGTCCTGCCCGCCGGCGTCAACTACGCCGCCCGAGGTGAATGATGCCGACCATGCTCGTCATCGCCACCACGGCCGTTCCGGACCACCTGCGCGGAGCACTCAGCCGCTGGACCAGCGAGGTCGTCCCCGGCATCTTCGTCGGGAGCGTCTCCGCCCGCGTCCGCGACAAGCTCTGGCAAGCCGTCACCGACACCGTAGGCAACGGCGCCGCCGTCCTCGTCCACCCCGCCCCCACCGAACAGGGCTACGCCATCCGAACCGCCGGCACCCGACGCCGCGTCCCCACCGACTTCGACGGCCTTACCCTGATCCGTATGACCGCCGCACCAAAGGCAAAGGAAATGCAAAGCCCCTCCTAAGGTGCAGGTCAGCAAGT # Right flank : C # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGCTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGACGCGGGGGTGCTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 10856-11559 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML123072.1 Streptomyces sp. ADI92-24 scaffold007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================ ================== 10856 33 87.9 28 .............................AACG ATGCCGGCCAGTCGTACATCAAGGGCCC 10917 33 87.9 28 .............................TTCT GCCCCATCCGGGACAGCCCCGGCTTCGT 10978 33 93.9 27 .............................A..A TCATCGGAGTGCTGATCCCTGCCGCGG 11039 33 93.9 28 .............................T..G CGTGCAGCTGCTTGTGCGCGGTGGTGAG 11100 33 97.0 28 ..............................T.. GCAGACCCGGACATTGCAGAGCAGCTTG 11161 33 90.9 28 .............................T.TG GGTTTGGCTCGGGGCGGCCGTCGTCGGG 11222 33 93.9 28 ..............................T.A CGCAGAAGGCGAGACAGCCGGCTGACCC 11283 33 87.9 28 .............................TGCT GACGGGGGAAACGCCGACGCGCGTCGGG 11344 33 100.0 28 ................................. CTTGACCTTCTTCTCTACGGGCGCGGCC 11405 33 100.0 28 ................................. CGCCGGTCTTCGAGTTGTTGACTGTCGG 11466 33 93.9 28 ..............................G.G CAGGCTCCTCGGCCTTGCTGCCGCCCGC 11527 33 97.0 0 ................................A | ========== ====== ====== ====== ================================= ============================ ================== 12 33 93.7 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGC # Left flank : TGGAACCCCGACAGCTTCCCGAGGTCGTGCAGGCCGGCACACAATCCAACGAGCGTGCGAGCACGATCCAGTTCCCCGACCAGTCCCACCCCCTCAGCTATACGCGCCCTCTGGTTGCCCGCCAGGTACGCGTCCCACAAGTGAAGCGCCATCGCGGCCGCGTCAAGAAGGTGCCTCACCAGCGGGTAGGGAGGCAGCGCCGGATCCAGCCCACGGGACTTCCCCCACACCGACTCATCCAGCACGCTCTGCCTGGGCAGCACGCCTACCCCCTCCGCTCCGCCACTCGGACCCGGCCCGGCAGCGGAAGGAACTCCGCTGCCGATCGAATCCAAGCACCCGGCACTGACAACGACTGCTGCGTGGCGCGCTCCGCACTCGCCTCGGCACCTTCACAAGCCACACCGGATATGGTGTCTGACGTGCGATCTACCGAGCGCGGCACCCCGTCGAGAACAGCAAAGAAAAGGCAAAGCCCTTCTTGAGGTGCAGGTCAGGAA # Right flank : AACGGCCGTAGGCGTCACCGGGGTTGATCGTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [45.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 15405-15681 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML123072.1 Streptomyces sp. ADI92-24 scaffold007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================= ================== 15405 33 100.0 28 ................................. GGGTCACCTGCTCTGCCACCATCAACAC 15466 33 90.9 28 .............................T.GA GCTACACCGCTCTCCACGGGTGGAGACG 15527 32 93.9 29 .................A...........-... GTCCTCGACCCGCCGCCGGTCCTCGGTCC 15588 33 87.9 28 .............................ATCT CTCTCTCAAGAACGCGTGCGACGCGTGT 15649 33 90.9 0 ........T......................TG | ========== ====== ====== ====== ================================= ============================= ================== 5 33 92.7 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGCGAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCCGCCGACGCGGGGGTGTTCCGGACGGGACGACCAGCCCGGTGATGCGCCCGCC # Right flank : GGTTTCGAGGGCGGAACACCCCCGCGTCGGCGGGGAGGACGTGAACACTGCTCACCGCGGCTTGCCCGAAGGCTTGCCCAGAACCCGGAGAGAGCACAGACGAGGCTTGCCCGTCGCTAGTCCAGACCGGAGCAGAGGCTAAAAGACAAGCTAAGTCGTTCACTGCGTGCGAGTTCGGGCAGGACGTGGGGCTGCGCGAACTCCGCCGGGATCCAGGACGTTGAGTGGGAGACGATTCCGTGCGCATCGCGATAGACGCGGCTCCGGCGAACAACGTCGTCACCAGGATCGATGCCAAGCACATGTGCGATGTCCTCGGGGGCCGGAACCATGCCGGCGGTGTGGCCGGAGGATTTCTCACCCACACCCCACGGTGACAACCGCTCAAGGTTCAGTGACACGGAACAACAGGCCCCAACTCGCACCGCGTCCACCTGCGGAAACGACATGTGAGGCATACCGGAGGTGTCACGCCGTCTGGTCCAGGCGCTGCGGCACGG # Questionable array : NO Score: 3.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.80,-14.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,1.01 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], //