Array 1 42861-43682 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUMH01000029.1 Allokutzneria sp. NRRL B-24872 NRRL_B-24872_contig_29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 42861 28 100.0 33 ............................ CGGCCAGGTGGCGGAGTTCCCGCCGTTGAGCAG 42922 28 100.0 34 ............................ CTCGTACCACTGCTGGCGGGCCTGGTGGATGGTG 42984 28 100.0 33 ............................ CGGCGCGTTGTCCCGGCGCCCGGTCAGGCTCCA 43045 28 100.0 33 ............................ CCGGATCTGCTCCGGGCTGCTGGACGAGATCGT 43106 28 100.0 33 ............................ CGCGGGGGTGGCCCGTCCATGCGGGTCCGTCCC 43167 28 100.0 33 ............................ CGGCAAGGACATGGGGGACGCGGGCTGGTGCAA 43228 28 89.3 34 .................A..A....T.. ACTGCTTGGCAAGCTTGGGCATGACGATGACCAG 43290 27 96.4 33 .....................-...... CTTCGCGAGCACCCTGGGGTTCTTGTGCTCTTG 43350 28 100.0 33 ............................ CTGGTACAGCCTCACCTACGCACTGATCGGCGT 43411 28 96.4 33 ........T................... CGTCAACCACGGCGATGTCGCTGGTCCAGACTC 43472 28 100.0 33 ............................ CTGGGAGGGGATCAGCGACGACTTGGAGCGCGC 43533 28 92.9 33 .....................A.A.... GCCGAGCGCCAGCGCCAGCTCCTCTTCCAGTTC 43594 28 96.4 33 .....................A...... CTTTGCCAGAGATGGCATCCTCAGATGCCGCCC 43655 28 75.0 0 ..G.....G.T...G.T....A...A.. | ========== ====== ====== ====== ============================ ================================== ================== 14 28 96.2 33 GAAGTCCCCGCGCCAGCGGGGGTGAGTC # Left flank : TACTGGAGGCGCTGGACTCCGTTGAGCAGCGAGGACCGGCCAACCCGACCGAGCAAGTGGCACGAGTATCTAAGCGAGGTTCCTCTCCGGCGGCCCCAAGATCCATTCGTACGTCCAAGTTGGCCCACGAAGACCTGCTTAAGCGGGCACGCCAGGAAGACGCGCATCATCGTGCGCGACACCAGCGCCCCATCTCCGCCGACTCCCTTCGGAAGAAGCTGAATGTAGCCAGTGACACCGCACGGGAGCTCGTCGCACGTGTTCGCAGGGAGGCAGACACCTAAGCTCCTACGTAGCCTTCTGCCTCCCGGCAGGCGCCGATCCGCGAGTCTGGTCTGCTGGGACGAGCAAATCTCAGGGAATGTCTCAGCGTGCGTACCGCCCACCAGAGATGCACCTACGGTGGCGTCACAGCCACAGGGTCGTTCGACGGCAAACGACATCACAAGCAAGAAAGTCACAAAACGGCAACGCCGGAGCAAAAGTGCAGCTCGGCAAGG # Right flank : CGTAGTTCTGCGGGTGCCACGCCGCGTGCGGTTGGCGGCGTCTTCGTAGTGCGCGAGGGTGGATAGTTGTTGCCTGGCGGGAATTTCGGGTGTTTCCAGAAAACAGCTGTAAGGGCAGCGTCGTTCCGTCACCCGTTGGTGTGATCGGGGTGTGGTTGTCGGGCCGGGGTTGTCGGTGGGTGCTTCTAGGTTGCGCGGCATGCCGATCGCTCGCCGTCGTACCGCGCCCGTAGCCATGGATGGCGCGACACTGCCGTGTCTTTGTGGCACGGCGACGGCAGCGCGGCCGGCTCTGCGCGTGGTGCCGGAGGTGGTGTGGGGCAAGGAGCGGGGTCTGCCTGATCCTTATCTGCTGGTCGCGCACGGGTTGGACACGGCAGCAGCGGTGAATGTCTTGTGCCGCAACTATTTCGCTGACGCGGTGACCGATCGTTTGAGGTTGGCTGGTGTTGATCGTCGGTGGTTGTGGGCGACGCTGGTCGCGGCGATGCATGACATCG # Questionable array : NO Score: 3.07 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTCCCCGCGCCAGCGGGGGTGAGTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 52856-54592 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUMH01000029.1 Allokutzneria sp. NRRL B-24872 NRRL_B-24872_contig_29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 52856 28 100.0 33 ............................ CACCGCGTCGACCGCGCGATCCCGCGCTGGTGG 52917 28 100.0 33 ............................ CAGCTTCGCAGTCGGAGTGACCTTCGACCGCGC 52978 28 100.0 33 ............................ CTACATCCCGGTCCTGCGCGACGAGCTCGGACG 53039 28 100.0 32 ............................ CGGGTGTAGAGGTCGGTCGGCAAGCTGAAACA 53099 28 100.0 33 ............................ CGATTGGTACCTGTGCGCGGACCCGAGCCGCAC 53160 28 100.0 33 ............................ CCTTCGCTAGGCCGCCGAGGATGTAGATGTCCG 53221 28 100.0 33 ............................ CGTGCTCACCTCGGGTGCCCACGTGCCGAGTCC 53282 28 100.0 33 ............................ GCTCGAGGCGATGGCCAGGTGGCTGTCGGAGAA 53343 28 100.0 33 ............................ CCGCCTGGTGCTGCGCGAGACGCTGGGCTTCTA 53404 28 100.0 33 ............................ CGACATGTTGATTCGGGAAGCGGTCGCCGATCA 53465 28 100.0 33 ............................ CCAGTTCGCGTCGGCCATGTTGGTGATCCGGTC 53526 28 100.0 33 ............................ CGGCGCCGCCCCGATCATCCCGATCAGCGGCGG 53587 28 100.0 33 ............................ CTCCGCAAGCAGGCAAAGCGACTTCGTCACCTC 53648 28 100.0 33 ............................ GAGCTTCCACCTGACCACCAGCGAGGCCAAGCG 53709 28 100.0 33 ............................ TTGCTCGGGCAGCGTGGCGAGGTCGGCGTTGTG 53770 28 100.0 33 ............................ GCTGATCAGCGCCGCGCTTCTGGTCGCTCTCCT 53831 28 100.0 33 ............................ CTCCACCTTCGGCACCGTCACGCTCAACGGGGG 53892 28 100.0 33 ............................ CCTGGTCGCCGATCGTCGCCCTGGCCCTGGCCG 53953 28 96.4 33 ...........C................ CGTCGTGGAGAACGCCGAGATCATCCGCACCGC A [53964] 54015 28 100.0 33 ............................ CCCAGACCACTCCACTCCACACCAGAGCACTCC 54076 28 100.0 33 ............................ CCGGCGCGCTGACGCGTGGGGCGCGGGCAGCAT 54137 28 96.4 32 ........................T... CGGGCTTGTTCCCTTCCCGGTTCGGGTGGGAA 54197 28 82.1 33 .G.AGT.....G................ CATCGAGCACTGGACCTACTGGACATACTCCCC GGG [54219] 54261 28 89.3 33 ...........G.....T......T... CTTCGAGTTCCAGCTGATCCTGATCGCCCCCGA 54322 28 89.3 33 ...........G.....A.........T TAGCTCGACCCGTGTCGAGTACGCCTGCTCACC 54383 28 92.9 33 ...........G.........A...... CGCGTTCGGCCTGGGGTTTTTCGTTGTCGCGTG 54444 28 92.9 33 ..........TG................ CGTCATGGCCACGCCGTGCTCGACAGCAAGACG 54505 28 92.9 32 ...........G......C......... CTTTGGCTTGATCTTCGCTCTGGTGCTCATCG 54565 28 82.1 0 .............A......C.A.GC.. | ========== ====== ====== ====== ============================ ================================= ================== 29 28 97.0 33 GAAGTCCCCGCACCAGCGGGGGTGCGTC # Left flank : TGCGGCTGATCCCCCGCATCGTCGACGACATCCACCACGTCCTTGGACTATCCACACCAGACACGCCACCACGCGGCGACCTCATCGACCTGTGGGACCCCGAAGGCAACGTCGCCAGCGGCCGCAACTACAGCGACACCGTCGACTGGTAACCCCATGCCCACCCTCTGCGTCATCGCCACCAACGCCATCGCCGACGGCACACGAGGCGCCCTCACCCGATGGCTCCTCGAACCCCACGCCGGCGTCTACGTCGGCACCCTCACCGCACGCGTCAGAGAACAACTCTGGAACGGCGTCCGCGAATCCATCAACAACCAAGGAGGCTGGGCCGTCCTCATCCACACCGCCAACACCGAACAAGGCTTCGCCCTCCACACCTGCGGCACCGGACGACGAACACCCATCGACCTCGACGGCCTCACCCTCCTCAACTGGGGACACCCACCCAAAAACATCACAAACCCATAACACCGTCCCAAAAGCCCACGTCAGCAAGG # Right flank : CGTACAGCATCTACACGAACTCGTACCCGCTGCGAGCTGCGGCTTTCCGCGACCGTCGGTATTGATCGGCATCGCCGCCGTCAAGGTATTGATGCCTCATGATGGCTTCCGCACGGCGCAGGCCCGCCTCCTGGGCAGGGCTACTTGCAGCCGGTTCCGCGTCTGACCACCGTGTACGCGCCAAGAAGCTGGTCATTGAGGGCAGCTTCTCGATGGACGACGTGGGGAGCGCAGCGCGATGACTGTCCGCGTGTCCACGCCTGGCTCCGCGACTCGTTTCCATGCGTTGATCGGACGAAGCGTTGGCGAGCTCGTTGCCCGGGTCATGGGCGTCGTCGTGGGGTTGTCCTTCTTGTTCGGGTTCGGCAACGTGTGGGCTCTGGCTGTACGTCTCGGAGTGACGGCCTGGGTTGCGCCTCTGGTCGCGCCCGCAGTCGACCTGACTGTCGTTGGCCTGATGGTCGCGATTCATCGGCTCGCGGCGGTAGGGATGGCACCAG # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTCCCCGCACCAGCGGGGGTGCGTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.00,-12.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-26] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //