Array 1 1096478-1095258 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035945.1 Blautia producta strain PMF1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1096477 32 100.0 34 ................................ TGCTGCTTCCGCTGATATTGACACGCCCTTTATT 1096411 32 100.0 34 ................................ TTATCTGTCCGAGACCATCACTGGAGATATCCCC 1096345 32 100.0 33 ................................ ACATCTGGGATGGTACAGCCCTGCAGATATGGC 1096280 32 100.0 34 ................................ CGCACGTCCAGCGTCCGGAGCAATACGTTATTGC 1096214 32 100.0 36 ................................ ATCAATCAGTTTTTTGTGCTTTGCTGTGGCGATCAT 1096146 32 100.0 34 ................................ ATATCATCACAGCGGCGAAAACAAAAATGTGTAC 1096080 32 100.0 35 ................................ TGCTGGCTATCCTTTTTTATATCTGAGATTACCTT 1096013 32 100.0 35 ................................ GCCTTATGCTGTGTTACAGGAAATAAAGAACGAAA 1095946 32 100.0 34 ................................ ATACTTACTCCTTTATATTTTACGGAAAAAGATT 1095880 32 100.0 35 ................................ TACAAAATCGCCTACCCACATTTTTTCCCAACCAT 1095813 32 100.0 33 ................................ CTTATCTTGGCTTGCCAGCGTCCAGACGCAAAG 1095748 32 100.0 34 ................................ ATCTGTTCCGCCGTCGCCACGGCAGTTCCCATGA 1095682 32 100.0 33 ................................ AACAGAGAATATATCCTCATAATTCGGATTATG 1095617 32 100.0 34 ................................ CCATGAGGGCCTGTATGTATCTGGTGTTCCATAA 1095551 32 100.0 33 ................................ ATAACAGTCAGTATAACTAATCATCAGTAGTTT 1095486 32 100.0 33 ................................ ACTTTTTCGATATCACCATCCACACGGATTCCG 1095421 32 96.9 34 ...........................A.... ATCCCCTGTATCCATACCTTCTCCTATCACGATT 1095355 32 96.9 34 ...........T.................... GGTGATGTGATTTTTACTTACAGTGATTCAGAAA 1095289 32 78.1 0 ..TA...T......A..A.T......A..... | ========== ====== ====== ====== ================================ ==================================== ================== 19 32 98.5 34 GTCGTCACCTTCGCGGTGACGTGGATTGAAAT # Left flank : AGTGGAAAATGTGATAGCAGATGAAAGGATAACGCCGCCTAGAAAAAGAAAAAACAGGTGGTTCTTAAGTTCAGGCAAAAATACCGCAAAAGCTACTGCGCCGAAGCCATAAGCCGGACAATAAGGTCCGAACAGAAAACCAACGTCAATAAACCGATGTTCCCTGACTGCTGCAACTGACGTTCCAATAGCCCAGCCGATGAAGGAATAGAGTAAGAAAAACCATAGAAGTTGATATAGTGTGTAGTTCAAGTGAGGCCTCCTTTGGGGATGATGTTGGATAATGGTGGTTTTAGTATACCTTATACGCGGATGGAGGAGATGTCAAGTGTAAGAAGGCGGAGGTTTTTGTGCGAATCGGGAGTGAACAGGAATTTGCAGGGGAATTCGCACCTGATATTGAGGTGAAAAGAGGTGGAGAGTCGTGTTTTTAATTGTAAATAGTGGGAAGATGTGATATTATATACAAAAAGTGGCGGGGGTATTTAGGGATTTTTGCT # Right flank : TTAAGCTTCTCTTACTAAAGTAGGCTTTATTTCATTTTCGATTTTTATAATTGAAATTATATTTCATATCAATTCATTAACCGAATACTGTTTACGTTGTAAAAGTTTTTCATCCACCCATACATTAAGTAATAATTTGCATTGACATACAACCAAATTTCCCGGCATACATTGTAAAAACAACGTTTCCGGGAGATTTTTCCTTGAAAAGTTATATAGAAGAACGTGCTATATCCATAGCCAACTACATCATTGAAAACAACGCAACTGTCCGTCAGACAGCCAGAGAGTTCAAGGTCAGTAAAAGCACGGTACACAAAGACGTTACAGAGCGTCTGCTGCAGCTTAATCCTTCACTGGCCAAGTGCGCCCGCAGGGTCCTTGACGTGAACAAGCAGGAACGTCATATCCGCGGTGGTATGGCTACCCGGGAAAAATATCTGCACAAGGTGCAAAAATAACGAAAGAGACTCTTGTTTTGAGGAAAATATGGGCGTATA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCACCTTCGCGGTGACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA // Array 2 3566115-3566741 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035945.1 Blautia producta strain PMF1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 3566115 32 100.0 34 ................................ TTTTTCAAAGTTTGGCTGTTCCATGGTTTAATAA 3566181 32 100.0 34 ................................ CAGAGCTATCACGGTATCCTGGAAGCTGAAAGAG 3566247 32 100.0 34 ................................ AGCATATAACTCCCCTGTTCGCAGGTCCTTGCCG 3566313 32 100.0 34 ................................ AATCGGTAGTGGGAGTGATAAAAACAGCAAAGTC 3566379 32 100.0 35 ................................ ACGGATGAATTAAACCTACGAAGCCTGGGATTTAC 3566446 32 100.0 34 ................................ AGTTCCACGTCTACCTGGACGCTGTGCCCCTGAT 3566512 32 100.0 33 ................................ TCGTTGTATAGTAATATCCAGCCGCTATCAATG 3566577 32 100.0 35 ................................ GCCTTAAAATTGCAGTACCATTTAAAGTGTTTGAA 3566644 32 100.0 34 ................................ TTTCGTCATTTCATGCATCATAAACCTTAGTCTC 3566710 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 10 32 100.0 34 GTCTCCAGCTTTGCGCTGGAGTGGATTGAAAT # Left flank : GAAAAAGGCACAATCGTATTGGTGCAGGTATGTCTCTAAGAGCCTTCCGATATCCTGTGTACTGCTAGGATCGATCGCCCACTGTTCTAATAATCGTGGATCATATGTTGTGTTTGTCATCATAATATCCACCCCCTTCTATTATATCAGATATAGGGGGACAATTTAAGATAACTATTGAAAGTTCGCTGTAGTACTAGAGCCTGCGACTGGAAGGAGAATTCCCGGACGGGGAATATGAAAAATATTTTTGAGGATAGTATCCTTTGGGGTGGGAATAGGAGAAAATGTTTCTGGAATAATTGAAGGGAGGGTGTTATAATAAAACAATACAGGGTAGTGCGAAAGGTAAGTGAACATAAATATATGGAGGGATTCGCACTGATAAAAGAATGGTTTATGATTTGTTTTGGTAATGGGATTAGGGGATGTAAGTGGATAATTGGATGTTTTGTATAAAAAATGGTGATTAATAATGGGGTTGTTTGGATAGAATTGCT # Right flank : TCTTGTGACATAAGCATCAAACCCATTTAATGTATGTCTCCAGTTTTTGCGCTGGAGTATAAGCACAAAAATCACTACAAGCACAAAACACAGGAGATACCCATATGATATACCTGGAAACAGAACGTCTCATCTTACGGGATTACACGGAGAACGATGCAGAAGAGTACAGCAGACTTATGGCTGATGATCAGGTGATGTATTATCTTCGGGATATTCAACACCATTCCAGAGAGGAATCGGAAGAGGATTTTAGAAATATCCTTCTGGATATGCGGGAGAAGGACAGGCAAAGGTATTTTCTTCATATACAGAAAAAGGATACAGGAGAACAGATTGGAAGCATTGGTTATACGGTCACGGATACAACTCCGGCAGGAAAACTGGTGCATCTGGGATATTTTACATATCCGAAATACTGGGGCTGCGGTTATGTGACTGAGGCGCTTGAAAAGGTAATGGAATTTGCTTTTTCCCAGGATGGTGTATACCGCATCACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCAGCTTTGCGCTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : NA // Array 3 3862452-3862883 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035945.1 Blautia producta strain PMF1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 3862452 33 100.0 34 ................................. TGCAATAAGCCGGTAAAACCGGTTCAGGTGACAG 3862519 33 100.0 33 ................................. CATATTCTGTTAGCTTTTGCTGGCTGTCCTTTT 3862585 33 100.0 35 ................................. TATCAGACTGGCGGCGTGTACAAAACTCCGCTTTA 3862653 33 100.0 33 ................................. CATCAAGAACGGAGTTGTTACGGCAAGTGGGAC 3862719 33 100.0 33 ................................. AAAATAGTATCTATCAATCCATCGCGAAATTTG 3862785 33 90.9 33 G.......T..................C..... CAGCAACAGCAGTTTACGTTCCCCATTGACACC 3862851 33 78.8 0 .........T......A....A.C.GC.....G | ========== ====== ====== ====== ================================= =================================== ================== 7 33 95.7 34 TGTCACTTCCCTTGCGGAAGTGTGGATTGAAAT # Left flank : TTTGTGCCGATTCTGGAAGCTGGTAAATTTTTGCGTGTTGGCAAGGGAGCTACAATCGGCTTTGGACACTATGAAATTTCTTATGATAAATAGAGGAAAGAATGAAAGGATAGTTTAAAATTGTAGTTTACGTATTTAAATAAAGTATATTTGGAAATTGCTTATTTATTATTTTTAAGCAGAATAGAATGAGTCTAAATTATCAGCCCATTATTCGGTGGTGTTTCCATGGACTTCAATAAGGACTTCATTATTGCGGCAGTTCATATTGAAGGTAATAGGATAGGGACTCGGAGTTATGAGAGTTTTATAAATGTCAGGTGCGAATATGGAGTGAACATAGTTTTCCAGGGAGACTCGCACCTGAAAAAAGTATAAAAATGTGTAGTTATGGCGAATTTATGGATTATATTTCAACTTAAGGTTGCATTTTTTAGAGAAAAAGGTTAGAATTTAGTGGAAAGATACAATATTTATATAGTGATATAGTGCATTTTTGC # Right flank : GAAGTAAAAAGGATATTATTTGTATGTAATACGAACATCACCTCCCATGCACAAGTGTAGATCACAACTGTCTAACCATTGTCCACCATATATCTATTTGAACGTTCTAACCATATAAAATCGAAAATTTGCATTATAAAAATTAAATAGAATATTTCCAGACATTCAAAGCCGCTTCCTTTACAGAGTCACAGTTTCATAGCTCTATTCTATCGGCATGCAATTTACTATAAAAAGCTGAATTTAAAAACCTACACATATAAAACTATAAAAATAAGTTACCAAAGGGAAGTTAAAATGGTGATTGCCACAAGAAATGATATTTTCACAAAAATTCATGAGCATAGAAATCAATACGAACATTACCCTGGGTAAGACAAGGAATCTTCACCCTATTCTGCAGAAAAAAATACTCCTTTTTGATAAGGATCACCATACTGGATTCTTACCGAAAAGGAGTTATTTATACTCCAAAGCTTAACAGCTCTGTCATTACACAT # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:0, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTCACTTCCCTTGCGGAAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 4 5394094-5392187 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035945.1 Blautia producta strain PMF1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 5394093 33 100.0 33 ................................. CCTTATTTTCTGATTTTTCTAGCAAATGCAATA 5394027 33 100.0 34 ................................. CAGAATGCCGGGCTTACAATCTGTCATGAGGAGA 5393960 33 100.0 33 ................................. TGATGACAGGTATGTTGAATTAAAGGTACAACA 5393894 33 100.0 34 ................................. TATGCTGTCCTACGCCGTAGGAGAAGGTCTATTG 5393827 33 100.0 34 ................................. TATAGATGTAATTGCCCGGACTACAGACATTGCG 5393760 33 100.0 34 ................................. TTCTATATACGCCCCATCAATTTTGCCATCAAGC 5393693 33 100.0 34 ................................. TGGAGTAACAGCATAAAAGCTGTCCTTTGCATTT 5393626 33 100.0 35 ................................. TTTCGCAGTAAAAATCACTCCATCTTTCTCCACAG 5393558 33 100.0 33 ................................. TTCTGACGATGCATATTTGATGGAGGCTTTTGA 5393492 33 100.0 33 ................................. TTCTGACGATGCATATTTGATGGAGGCTTTTGA 5393426 33 100.0 34 ................................. ATTATAAATTGTGGCCTGACACTTGCCTATGATA 5393359 33 100.0 33 ................................. TTTCAGTTCAACTGGTGTCATCTCAATAGCTTC 5393293 33 100.0 33 ................................. AAGAGTGTATCGTCTGGTATTTTAAATTTTCCA 5393227 33 100.0 35 ................................. CGCTATCAAATTTTGCATTTCGTCGAGACAGTCCG 5393159 33 100.0 34 ................................. CCTTCCCATTTTAATAAAAGCATAGATTCTATGC 5393092 33 100.0 33 ................................. AGATCGGATCATATATAAACCAGGAAGGTGTAA 5393026 33 100.0 33 ................................. CCCTGTGAGTTTCGGATGACGCGTTCTTTTGCT 5392960 33 100.0 35 ................................. CGACGCATCAGCAATCCTGGGGATGAATCCATATA 5392892 33 100.0 34 ................................. TTGTTAGGTGCAGAAGCCGAGCACCAGCGCATAA 5392825 33 100.0 36 ................................. TGGTCTAAAGACGGTGGCAAGATCTGGACCGGAGGC 5392756 33 100.0 35 ................................. CCTTATTATCCGTTTCGGTCTGACCGTTTCGTCTC 5392688 33 100.0 33 ................................. CATTATGGTTGCCATCCTCTCTCTGTATGCTCT 5392622 33 100.0 35 ................................. TCGGTCTTGCCAAGCCTCACCACCTCTCAATCGTT 5392554 33 100.0 33 ................................. CACGGCCTCGGGGATATACAGATAATCCTTGCC 5392488 33 100.0 35 ................................. CAGGATACGCTTTTCTTGTTTACTCTTGCACTATC 5392420 33 93.9 35 ...........T.....A............... TTTAAATCTCCGCTAAATGCTATAGTAGACGGATG 5392352 33 97.0 34 ..............T.................. AGAATTGGCTGATGTGGGACTGATAGAGAAGAAA 5392285 33 97.0 33 ...........A..................... TCTGGATCACAAAATCAGGCATTACAACGGTAC 5392219 33 97.0 0 ...........................C..... | ========== ====== ====== ====== ================================= ==================================== ================== 29 33 99.5 34 GTCACTCTCTGCGAGGAGAGTGTGGATTGAAAT # Left flank : AGCGGAGGAAGTCAGAAAGGAACCTCTTCCGCAAAAACCGGAGATGAAACGCCTATCGGTATGTTTGCAGGCTTTGGAGCTGTGGCACTGATCGCTATCTTCGCTTGTACACTCAGCATTTTGAGGAAAAGAAAAAAATATAATTAATTTTAACAATTTACAGCAAATAGCTTCACTTATTATTTTACATACTCCCGGCAGAAGATTTTTTTCTGCCGGGAGTATGAGACAGAGATAAAAGACTCTGTTGAATTGGTAAATATTTTTGATATTTGGAATAAAAATATCAGCAAGCAAAAGAATACTCCGCACATTTGTGCAGGGTATTCTTTTTTTGCAGGTGCGAATGTCAAGTGAACATGAAATACCAGGGGGATTCGCACCTATATTTTATTGGAAAAAATGTGATATATGTGTTAAAATAAAAAATAGATATATAGAATATGTGATAAGTGTGCAAAATTCCTATGAGTAATATGGAACATTTGGGAGATTTTGCT # Right flank : TCCCGAAGTGAGAGGATTTAAGCATAAGTTCCCAGACAATTCCCATGTAGACATATGCGCCAATCTTCACAATCAGGGGCAAAATGTATATATACCACTTCAGTCCATTCCTTTTAACATCAAGCAATATTTTCAACAATATTTTACACTCAAAATTTCTTATATTGAAAAATGCAAATTTACATATTGCTTTATAACAAATCCATTGACACAAATAGAAAATCTAACTATAATAATGGCACAGTAACCCAATAATTTATATACAGCGTTAGTCCATGGCTGACGCTGTTTTCTATACAGGTACCTTGTTAAGGATATGACCAACTCTGCATCTGCTACTGTTTTTTAGTCATAAACAGTCTCAGTTGAACTGCTGACATGCTGCGTGCTGCTGCATCAAACTGTGAAAAATAGTAAAATCAGCGCAGTATAGTTGAGCATTCCACATCGTACCTGACACAGGTTTTGCGTCTGGGCGCGGACAAATAAAACTGTTGGAG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTGCGAGGAGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: R [matched GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //