Array 1 411-918 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSTY01000030.1 Parabacteroides merdae strain OM06-16AC OM06-16AC.Scaf30, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 411 47 97.9 29 ..........A.................................... AGTCAATTGTACCTCAAGACCCGACAACT 487 47 100.0 30 ............................................... TACCTCTTCAATCTTCTGCGCTTTGGGGTC 564 47 100.0 30 ............................................... CGGATATAAGCAGAACCAATGCCACCGCCA 641 47 100.0 30 ............................................... ATTGCATTATCAGAAGAAGCAGCCTTAACA 718 47 100.0 30 ............................................... AAAGCATTATACAACTTTACAGCACCCACC 795 47 100.0 30 ............................................... GAAAATGCTGCAAATTTGGTAGGTGCCGTA 872 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 7 47 99.7 30 GTTGTGATTTGCTTTCATTTTAGTATATTTGAACCATTAGAAACAGC # Left flank : AAAAACCACCCGGTTTCACCTATTTTATAGCCGTTTTTACACAAAATAATCGAGTGGTTTGCAGGGATGGGAATCAAGTGTTTATTGTTTGTTTTATTTGTAATATACTAATATACAGATATGTATAAGCGGAATACCTGTTTCCCATCCAAGTTGCCAGTGATAGGGTTGTGATACCGTAGTGATAGAGAAAACGGGCATATATCACTAATCAAACAAGTTGAATATCAATTGGTAAAAAGGAATCAGTGATACAGNNNNNNNNNNAATATCAATTGGTAAAAAGGAATCAGTGATACAGTGACAGAGGAAATGGGAAATACTTATATGATAAGGTTCTGTTTTTTCTTTGATATAGTTCATACGATTTCCGAATTTTGTGTGGTTGCCCTGGCTATAATAAGCCATACG # Right flank : CAGAATTGCTATTATCAATTAATAATCAATGGTTTATAATTCAAATTAAAAATAAAAAACAGACGTTGTTTCAAGGCAAGAATCCTGCATTGAGTAGGATTCTTGCTTTTTAAAACAGTTCCAATTGCTGCCCCGGAGTATTTACTTCCATTGTTTTTTTACCATAAAAAAGCTCTATATTCCCAAATTGCTTATCCGTAATACACATAATTCCAACCTTTCCATATTCCGGAAGAAAAGATTTAACTCTTTTTATGTGGACATCTGCATTTTCACTACTGGCACAATGACGGACATAGATGGAAAACTGAAACATGGTAAACCCATCCCGTTGCAGATTCTTTCTGAAATCTACATACGCCTTCTTCTCCTTTTTTGTCTCCGTAGGCAAGTCAAATAATATAAGCACCCACATAATACGATATTCACTAAATCGGTCCATTACATTTTCGGATAGAATATTTTACGTAACTCTCCACTAAAGCATTTGTACAAAGAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATATTTGAACCATTAGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.90,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //