Array 1 17811-19492 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEOWW010000038.1 Staphylococcus haemolyticus strain AA34 NODE_38_length_20831_cov_8.914654, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 17811 33 100.0 33 ................................. GACTAATTTCAAGTGGTTCAGTTGCATGAGCAA 17877 33 100.0 33 ................................. GACAAAAGTACTTGTGAACAATGAACAACACTG 17943 33 100.0 33 ................................. GACTTTTATTAAAGAATGGTGACATCGCTTTGA 18009 33 100.0 34 ................................. GACGTATTAGTAAGGGACAAAAAGCGAATATGGC 18076 33 100.0 33 ................................. GACTATCATATGTTTTAAATATTGTATCACGCA 18142 33 100.0 32 ................................. GACTGAGGATGCTACGGAAAATGATACGCCAT 18207 33 100.0 33 ................................. GACACGCACAAAAAAAGACTGATACCCACGCCA 18273 33 100.0 32 ................................. GACTGACAATACGCACGTTTTTGCGTAAATAA 18338 33 100.0 33 ................................. GACAAGAGGGTAGGGTTTAAATATGCAGTCGGT 18404 33 100.0 34 ................................. GACGATGGAGATATCGTGCTTCAAGATATAGCTA 18471 33 100.0 33 ................................. GACAAGACGGTACAGCTGTTGATTTGAGTAATG 18537 33 100.0 33 ................................. GACAATGCGTATAGGTTTAATGCGCTTGTTTTA 18603 33 100.0 34 ................................. GACCAAATGGCTAGAGCCATTGTTCAAGCAGTCG 18670 33 100.0 33 ................................. GACATAAAGCTACTGTTGCTATTCAAGAGTTGA 18736 33 100.0 32 ................................. GACCAAGGGCTAAACGAAACATTTTCTATTGG 18801 33 100.0 33 ................................. GACATAAACCCTAAAACTGTCGACTCGTCGGGT 18867 33 100.0 33 ................................. GACAAAACGTCAAAAAAGATATGGCTACCGTAT 18933 33 100.0 33 ................................. GACGATGACTTTATGCAATTCTACAAAGATATG 18999 33 100.0 33 ................................. GACTTAGTATTAGCAATTTTGCTTCGTTGTACA 19065 33 100.0 32 ................................. GACAATGCTAGGTACAATTAATAATGCTCTTA 19130 33 100.0 33 ................................. GACTAGAGTAGGGTATTTATTTTATCCGAAGTG 19196 33 100.0 33 ................................. GACTAAATTCGCTAGTCCATAGTGAAATTAGAA 19262 33 100.0 34 ................................. GACAAAGACATATTAGATAGTAAAGGAATAAGGG 19329 33 100.0 32 ................................. GACAATTTTATATCCAAAATCATGGATAATCG 19394 33 100.0 33 ................................. TATCTTTTTTAGGTCGGCTTTTTATTTTGAATA 19460 33 97.0 0 .......................A......... | ========== ====== ====== ====== ================================= ================================== ================== 26 33 99.9 33 GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA # Left flank : ATTATCAAGTAAAAGAAAAAGCATTTGTAATCTATTTATATCCAGAAGCTGGCCTAAGCATTAAAGAACAAATAAGATTTAGAAAAATACTAAATAACTTACCTGTTCCGGTCATTGTTTTAACCGAATCACCACGTTTTTTATCTGAAAGTATTAAAGGACTAAATTATTTTATTAATAATGTTCAAATGATCACAGAATCTTTTTTTGAAGATAGCTATTGGAATGCACCAATTAATGTAGAAAAAGAACAGATTGAAGAGAGGTTTGAATATTTATTTGTAAAGTATTGTTCAGTTTTAGAAATAAAACCGATTATTTCTAACTATTTACTTGCGGATATCATTGTTTTTAATGATATTGATCTTTATATCCTTGTTTCATTTTTGAAACACTGTAATTTAGAGTATAAATTAGATATCGATAAAACAAAAATTTCATTAGCATTATCGTCATATCTATTTTCTTAATTATTTTGAGGATTTATAATGATGCTAGAG # Right flank : ATATAGCAAAATCACTGATAGGGAGAAGCATATCATAAATGATGAGGTTTTTTTAGCCGCTTCATAAAGGGATTTTGAACGTATCAGAACATATGAGGTTTATGAGAATTGCTGTTATGTTTTTGTGAAGCATATCATAAGTGATGCGGTTTTTATTATTATAAAGTAGAAAGATAGAAGTCAATAAATAATATATAACGGGTGATAAATGATGAAGTATTGGATTATTCCATGTAATGTTAAAGATTATGATGTTATAGGTGCATTCAATAAATTAAGTGAAATCGATTGGAAACAAAGTAATAATATGAAGTCAGCAGCGGTTGGAGATATGGTTTTGATTTATCTTTCCCGTCCCTATTCATGTATTAAATATATATGTAAAATTAAAGAAGTGAATAAGCCAAAATCTACAATTGAAGATAGCGATTATATTATGAAAGGTGATAATTATGTTAATTATGGTAATTATATGCAACTTGAATTACTTGAAAGTATAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-0.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //