Array 1 9244-10999 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMKG01000030.1 Micromonospora sp. 15K316 NODE_30_length_41639_cov_46.4196, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 9244 37 100.0 40 ..................................... ACGGTTGCGGACTTGCTCAAGGGCGGCCGGATGGCGAGCT 9321 37 100.0 37 ..................................... CCGGACCCGAGGACAACGACACGGGCGCCGCGCTGCT 9395 37 100.0 39 ..................................... GGGCGAGCCGGACTCGCTGCCGGAAACCGGGGTCGTCAG 9471 37 100.0 39 ..................................... CCTCAGAAGGTAAATCCCCGTATTGGAGTCGACAGCCAG 9547 37 100.0 39 ..................................... ACGGCCGGGCAGGGCAACACGGTCAGCGGCAACGGCGCG 9622 37 100.0 39 ..................................... ACGGCCGGGCAGGGCAACACGGTCAGCGGCAACGGCGCG 9697 37 100.0 37 ..................................... CGGTTGCTCACCGCTGATCACGTACGCCGATCGAGCG 9772 37 100.0 37 ..................................... GCGGTGGTGCCGCGCAGGTCGGCGGGGTTGGCCGGCA 9847 37 100.0 37 ..................................... CGGCGTCGCACAGCTCGAACGACTCGCAGGTGCGGCG 9920 37 100.0 36 ..................................... ATCATCGTCGGGGCCATCCAGGAGCCGACCAAGGAG 9993 37 100.0 39 ..................................... GCCGGACGCAAAGGCCGGCCATGGCGCAGGCTATGCGCG 10068 37 100.0 37 ..................................... GGCTGGGAGGAGGCCAACGAGCGGCTGCTGCGCGCCC 10142 37 100.0 38 ..................................... CTGCGCGCGGCCGCGGTGGTCACCGCGCAGTCACGGGT 10217 37 100.0 38 ..................................... GAGAAGAAGGTCAAGCAGGCCGACGGTCGGGTCATCAA 10292 37 100.0 38 ..................................... ACGGAGCGTTCGAAGGTCTGCTTCCAGAACGTCTTGGT 10368 37 100.0 40 ..................................... TCAGCGCTACGGGGCGGCCACTCCTGACCGGCGACAGGCA 10445 37 100.0 38 ..................................... CAAGTACCGCTGCCGCTGCCGGGCGGCGTCGCCCTCGG 10520 37 100.0 37 ..................................... CAGTAGCCCGGCTCGCCGTTGGTCAGCGCGCCCTCCA 10594 37 100.0 39 ..................................... TCCTCGATAGGACCGGCATCAGAGGGGTGAGGGGGCCGG 10670 37 94.6 37 .T..............A.................... TCGACGGTCGGGCTGGCCGTGGACTCGTCGGGAAGGG 10744 37 94.6 35 .............G........A.............. CCTCCGACGCGCGACCGGTCGGCCGTGCTGCGCCG 10816 37 94.6 38 ...................T.A............... TTGACTTCGCCGGTCGGGACTGAGCTTCCGCTCGACCT 10891 37 100.0 36 ..................................... TGGGATAAGAGGATGCCCACCGCGGACCTGAGCACC 10964 36 75.7 0 ..C...TC.......-T...C...T....G....G.. | ========== ====== ====== ====== ===================================== ======================================== ================== 24 37 98.3 38 GCTGCGCTCGGCCCACGGGCTGGGCGAGGATCGCAAC # Left flank : TCGGCTCCGGCGGATACAACGCAGCGATGCTGCGCGAGCTGGTCGCCCCGGTGGGCTCGGTCACGACCGTGGACATCGATCGCGAAGGTGACCGACCGTGCGGCCGTCTGCCTCGCAGCGGCGAGTTACGACGACGTGGCCGTCGTCTGCGCGGACGCCGAGCAGCCGATCGACCCGCCCGTTCCTACGACTTGATCATCGTCGAGGTCGGGGCGTGGGACATTCCGCCGGCATGGATCGCGCAACTGACCGAGAACGGAACGCTGGTCGTACCGCTGCTGTGGGAGGTCGAGTGCGACATCAACGGGTTTGGATTCGAGATGCAGCGCCGTCACTCTTCGAGCTGACCCTGCACGGGAGCTTGCCTGATCTAGGAACCTCTAGTGTCCACCCAGACAAGGGAGGTTCCCAAGTGGGATATGGGATGAAATGGCTACAAACTGTCTCGACGGTAGTGCTATCGATGATCGTGCGGTATGCATATCCACAGTTCGGAAGCT # Right flank : CAGCCAAACCGCGTCGCCCCGAGCCTTCATGAGGACGATGTTGGTCTCGGTCCACGCGCGTGTGAGGATCCAACTGGCGATGTACCGCCGTTCCGTACGTTGGCTGCGCTCGGTCGGCCGAGTGACTCGTACGGGGATGTTGGTCTATGGGTCGGGTGGGGCGTATCGTGTTGATTTTGTCGCATTACCCGGCTCGACTCTATTGCTGATCGAGCTGTGCCACTTGCGATGCGCCGGCTTCCCAGGCCAATCCGCTTAGCCGGTTTCCCGACAGGACGTGCTGGGTGGCGTTGACCGACGGCGGTCTTGGTGGCTGGATGGGCCCTGGTGATGTCGCAACTTCGTCGGGCAGTGAGGGCGCTGAGTGTCTGGTGAGGGTGAGCTGTGGGCGCATAGTCCTGCTCCTGGTGGAGGTCGATGGCATTCTCTTGCTGATCATCTCCGTGGCACGGCGGAGTTGGCGCGGCGGTTTGCTGCTCCGTTCGGCGGAGGTGAGGTGG # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCGCTCGGCCCACGGGCTGGGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.90,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 19846-20996 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMKG01000030.1 Micromonospora sp. 15K316 NODE_30_length_41639_cov_46.4196, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 19846 37 100.0 36 ..................................... GCGGAGTCGAGCCCAGCGGCGGCGAGAACGGCGGGG 19919 37 97.3 38 .A................................... AACGTCAACGACAACGGCGAGTTGTGTCTCAACCCGGG 19994 37 100.0 39 ..................................... GACTGGCTGGACGAGACGCTGACCTCGTGGCGGCGGGAC 20070 37 100.0 38 ..................................... ACCGACCGCGGCCGGCGGGCCATCGTCGTAGACGCCGA 20145 37 100.0 37 ..................................... CACCAGCAGCGGCGCATCGGAGCGGTAGAACAGCCAG 20219 37 100.0 37 ..................................... GGGCGTAGGTCAGCGGCTGCTGCGCCGGCGCCCGAAC 20293 37 100.0 37 ..................................... TCGTTCAGCCCTGCCGGGCGGCGTTGTGTCCGGTCTT 20367 37 100.0 37 ..................................... CCCGATCAGGGTGAGCGCATCCAACGCCACCCCGAGG 20441 37 100.0 37 ..................................... CGGACGTTGCAATCCGCACCCGCCGGAATGGGGGTGC 20515 37 100.0 37 ..................................... TCCATGAGGTCTCCTAGGGTGAGGGTGTGCCTGGGTC 20589 37 100.0 37 ..................................... TCTCTGGTCTGGCGCTCCGCTGCTTCCTTGCCGGGAT 20663 37 100.0 37 ..................................... CGTAGGAAGCATTACCGATGAGCCTCACCGCCCCGCC 20737 37 94.6 37 ..............TT..................... ACGATGGGGAGCGCGTGCCGGGCGACGCCGGCTGCCA 20811 37 100.0 37 ..................................... AGCTACCAGTCGTACACCCCGGACACCGCCGTGGTGG 20885 37 97.3 37 ...............G..................... GCGTACGCCCGCACCAGCAGGTACAGGTCCGCGGCGA C [20900] 20960 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 16 37 99.3 37 GCTGCGCCCGGCCCCAGCGCCGGGCGAGGATCGCAAC # Left flank : CACCACTAATCCAAGCCCGGCTGCTCGCACGCCACCTCCGCGGAGACCTGGCCACCTACCAGCCATGGACGGTGAACTAAGCCATGGATCTTCTCGTCACCTACGACGTAGAGACGGCAACCCCGCAAGGGCAACGGCGACTACGAAAGGTAGGCAAGGTCTGTGAAGCGTACGGCCACCGCGTGCAGAAGTCGGTATTCGAGGTGGTCTGCCGCGAAGCCGACAAGGTGCGCTTCATCGCTGCGCTTCAGGGAGCCATCGATCCACTGCAGGACAGCATCCGTATCTATCGACTGCCCGCCCATGCGCTAGACGACATCGAACATCTTGGCAAGCCACGGCTGATCGACCCACGAGGCCCGTTAGTGATCTAGGGACCCCAAGTGAACGCGGACAGCTCCGAAGGTTCCGAACCACCAACAGCGAATAAGGTGGGCAAATCGACACCTAGAAGAGTCGAGTGGTCATCGCTCGACAGCTATCTTTGCTGCTCGTGAGCT # Right flank : CCTCGAGCCCAAGGCCACCGCAAGGCCAGTGTTGAGCAGAGGCTTCAGGTGCCTGTGCCGGTCTGCTCGCGAGCGCGGAGGCGGTGCTGCACGTTGAGTGGGACTCACGAACACGACTGCATGCCGACGGGCGTCTGCCGCCGCCAATTTCGCCGTCGACTTCCCGGCAGAGCAGACCGATTGATCGCGACGCATCGGCAACCTCGGCCTGAGCGACGGCGATGGCGAAGTCGCTGTCAGGGACGTCGATCGGTCAGGACTCGAGTTTCACTGTGGCGTACGGCTCCCATACGTACATGCCCGAGTCGCGGTTGAGGATGATGAGCTGGCATGAGTTGATTTCGGCGCTCGCGTTCAGGTCTGGGGCGGATGCCAGGGCTTCGACAAGTGGAGCGGCCGGGCCTTCTGTGTTGGTGTAGGCGAGGCTGAGGTGGGGGTTGTACGGCTCGGCTGGTTCGGGCACTCGATCGCTTCCCCAGACGTCCGCGATGGCTGCGCGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCGCCCGGCCCCAGCGCCGGGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCTGCGCCCGGCCTCCGCGCCGGGCGAGGATCGCAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.20,-17.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //