Array 1 43531-42441 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAESMM010000014.1 Staphylococcus sp. GDX8P54P GDX8P54P_contig_14, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     43530	    36	 100.0	    30	....................................	ATGTAACCAATGTGCATTGTTGCACGTAAT	
     43464	    36	 100.0	    30	....................................	AACGAGTACCAAAACCATGTTACAAATCAA	
     43398	    36	 100.0	    30	....................................	CCACAGCTGTGTGTCCTGTACCGTTATTAA	
     43332	    36	 100.0	    30	....................................	AATATCCAGTTCGTGCAGGTCGAAAAGATG	
     43266	    36	 100.0	    30	....................................	CAGTTACAAAAGTATAGCTAACCGTACCCA	
     43200	    36	 100.0	    30	....................................	GTATCTACAAATATCAATGTTAGCACAGCT	
     43134	    36	 100.0	    29	....................................	TACACCAGCAAATCGAATATTGCTTGAAC 	
     43069	    36	 100.0	    30	....................................	ATGAAGATTTAAAAGGTGACGAATTGAAAG	
     43003	    36	 100.0	    30	....................................	CTGGTGGTAGATTGCTTTCTGTACCTTCCG	
     42937	    36	 100.0	    30	....................................	GTTGGGTTGAAGGTGGTGCAGATAGAAAAG	
     42871	    36	 100.0	    29	....................................	CTTTAGCCCATGTTTTAGGCTCAAGTATT 	
     42806	    36	 100.0	    30	....................................	TGTTATACAAAGTGATAGCTTCTGCTTGTC	
     42740	    36	 100.0	    30	....................................	TTGAACTGCATAAACGCTACCAACGTTTTT	
     42674	    36	  94.4	    30	...............G..................G.	ATGTGATTTACCACTAGAGCCACCTCCATA	
     42608	    36	 100.0	    30	....................................	ATAAAGGTAAAGTAACAGCTGGTGCGTTTG	
     42542	    36	 100.0	    30	....................................	AAATCGACAATGTAAGCTATGACGATATAC	
     42476	    36	  86.1	     0	........G......G......A...........CG	|                             	
==========	======	======	======	====================================	==============================	==================
        17	    36	  98.9	    30	GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC	                              	       

# Left flank :   GATGCAAACATAATTGTATTAACAGGATCATTACATTTTCTATCCGAAGAGTGGAAATACAATAACTATATAAGAGATGGTGAGCAAAAAAACACATCTGAATTTCTGGAAGAATTAGAGTGGAATGCGCCACTTAATTTTGATAAGAGGGAACTAGAAGAAAGTTTGAATCGATTCATTTTAACTTATCAAGATAAATTAGAATTAAATCCTATAATATCTAATTATCAAATAGCACAAATTATGTTATTTAGTGCTATTGACATATATGTTGGCGTTTCATATATGCAACATTGTAATCATAAATTTGAATTGAAAATTAAAAATGAATTACTGCCTAAAAGCATCAATAAATATTTAAACCAACAATCGTTGAATTAATTACTTTGCTATAATTAACATAATAATCTATTATTATCTTAGTGAATGAGTTTAGCTAACTTGTTCACTGAGATACCTTTTTATAAACTAATTCTTTTAGCGATTTTATATTGCTAGAG
# Right flank :  TTACATTGATGCTACACCGCAAGATTGAAGTTTTAATACGCTAGTACTTCAGTCACAACTATTTTAAATAGCGATTATTAAGTGCTATTCCTTTCAAATGATTTGATTAAAGTGATTATCTCTATAATTACGCCGATCCATTATTCTTTTCAAATAATCCATAATATTGAGATCAATTATTTGGGGAAGAATGTAGAAATATTTAATATTAATTAAAATAGTAGTTGACTAACATGCTAAGGTGGAAATATAATAAATGTAAGGAACAAGTTTAGCTAACTTGTACTTATACCTAAAATTACAGAATCTACTAAAACAAGACTTTATGTCGTGTTTATCCCATTAATTTATTAATGGGATTTTTTCTTTATAATTAGACAAATCGCCAACGATGATGACTATCGTTGGCGATTATTTTTTCATACTATTGATTATACATTCTCATCTGTAATTTGGCCGAGCCAATAACTGCCGGCAAAACCGACGATTAATGTGATGAT

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-3.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [7-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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