Array 1 201695-199877 **** Predicted by CRISPRDetect 2.4 *** >NZ_WEMC01000002.1 Pediococcus acidilactici strain FAM19071 FAM19071_scf0002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 201694 36 100.0 30 .................................... TAACTTTACGCTGGGCTCCAGGAATCATTC 201628 36 100.0 30 .................................... CACTTGAAAAGTAAGAACTCTCTCTCATTT 201562 36 100.0 30 .................................... GAAGATAAGCAGTATTTTGATGAAACTATA 201496 36 100.0 30 .................................... GCTTCACTGAATGTAAATCCCCCGACCTTT 201430 36 100.0 30 .................................... TTGACGATTTGCCCGGGTTTCACCGTGCTT 201364 36 100.0 30 .................................... ACAACACTGCCGATGGATTAAACCGTAGTA 201298 36 100.0 30 .................................... TATAAAATTTGGCGGTTCGTGACTTCCCGC 201232 36 100.0 30 .................................... ATACTCTTTTAAACAATACCAAACACCATC 201166 36 100.0 30 .................................... TGCCAGTTATTGATGAATTCGTTGGCTTTC 201100 36 100.0 30 .................................... CATTCGTTTGGCTATGTTTTCAGAATTTCT 201034 36 100.0 30 .................................... CATTCGTTTGGCTATGTTTTCAGAATTTCT 200968 36 100.0 30 .................................... CCTCACTCATATTCGTGCAAGTCTATCTCC 200902 36 100.0 30 .................................... AGAGATAAATTTGATCAAGTTCAAGAACAA 200836 36 100.0 30 .................................... GTGCGTGAAGGTTCGTAATACTTAGCCTTA 200770 36 100.0 30 .................................... AAGTCAAATTGCTCAACCTTTTTATTTTTC 200704 36 100.0 30 .................................... GGAACCAGCTTCGTAACACCCGGGCGAATG 200638 36 100.0 30 .................................... ATTCGTATCCTAGATGGTTTGGACGCTTCA 200572 36 100.0 30 .................................... CCGGTAAACTGCTAAGGTCGCTTAAACATA 200506 36 100.0 30 .................................... ATTAAGGTAGCCCTGCTGAAAATAGACAAG 200440 36 100.0 30 .................................... TAGATTCTATTCAGCCATTAATCGACGCTT 200374 36 100.0 30 .................................... CTTTCCCTAATAAATAATCTACAGAAACGT 200308 36 100.0 30 .................................... TACTTACTCGGTAAAACAGATATCGAAACC 200242 36 100.0 30 .................................... CCTAAATAGGTTATCATTGGTCGCGCGAAC 200176 36 100.0 30 .................................... TTGTAACGGATGTTACTCCGCAGGAAGGAG 200110 36 100.0 30 .................................... CAATGTTGTTGTAATGATATGTGTTCTATA 200044 36 97.2 30 ..........A......................... GCATTTGAGCAGTGAATTCCCCACAATACG 199978 36 100.0 30 .................................... CCGCATTGACCATGGAATATCCCATTTCAA 199912 36 94.4 0 .................G................A. | ========== ====== ====== ====== ==================================== ============================== ================== 28 36 99.7 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGGGCAACGTAACCAAATTCACGATCAGGTCAACCAACTATTTAATACGATTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTACTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGGTTTTGAAGATCCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAGCTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATCGAATTCACAGAAATGGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAATAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : TGACTGAAATTAATAAGAGTTAACGTTTTAAGGAAGTTATCAATAGTATTAGTAGTGAACTTTGAAGAATGGAATTTTAATGAAACTACTAGTTACGGAGAATGATAAACTACTAAGGTTCAAATGAATTTATAGGTTTAGCATTATTACTCGAAGACGACGTTTTAGTGGTGGTTGGAAATAAAATCCGCTCGAAACGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAACTGGATGATGAAGAATAAAAAGGCATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGATATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAAAGAGGCGATACGTCTCTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGAAAAACTACAATATTTAACTTTGACTATCAGTGTCGTTGCTCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //