Array 1 931914-933203 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AP018935.1 Streptococcus agalactiae strain HU-GS5823 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    931914	    36	 100.0	    30	....................................	ATGCGGTCACTCATATAAGACATCTCCTTT 	
    931980	    36	 100.0	    30	....................................	CCCAGTTGCAATGACTGCGCCAGAAGTCGG 	
    932046	    36	 100.0	    30	....................................	TAATGGTTTATCTCTTTTTTCATCTGTTAT 	
    932112	    36	 100.0	    30	....................................	AATTATCAATGTTTACAACTGTTTTAGTTT 	
    932178	    36	 100.0	    30	....................................	TAAAATCCTGAAACAGAATGGGATTGATAT 	
    932244	    36	 100.0	    30	....................................	AAAATCAGAACGCCTTATTTGAAGCAGTTA 	
    932310	    36	 100.0	    30	....................................	CCGTTCAATCTGTTCTTGCTTTTGGTCATC 	
    932376	    36	 100.0	    30	....................................	ACACCGTTGCGGTTGTTGTCGGTCACTCAA 	
    932442	    36	 100.0	    30	....................................	TCTATTAACAATAGTTTTATCCAATTGTTT 	
    932508	    36	 100.0	    30	....................................	TGAAAACAAGCGCAAAGCTGTCAGAAAACA 	
    932574	    36	 100.0	    30	....................................	AGTTATCAATGCTATATGGTTTCTCATCTT 	
    932640	    36	 100.0	    30	....................................	CGTACCATCTATCAATTTACCGCAAGCTGT 	
    932706	    36	 100.0	    30	....................................	CCGATTATTTCCTACATAATACGCACGTTT 	
    932772	    36	 100.0	    30	....................................	TTCTAAATGCTGGTGACTGCTTTGCATAAA 	
    932838	    36	 100.0	    31	....................................	TTGCTGCTAGACCCAAACAGTTTATTTTTAG	
    932905	    36	 100.0	    30	....................................	TCCTTTTTTAGATAATGTGCGATCACGGAC 	
    932971	    36	 100.0	    29	....................................	TTTTACCAATGCTTCCATATCGCTTATAT  	
    933036	    36	 100.0	    30	....................................	TACTTGACGAATTGAAGATGACGGAATTTA 	
    933102	    36	 100.0	    30	....................................	TGGTTATACATTTACTAATCCATCAGCATT 	
    933168	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        20	    36	 100.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                               	       

# Left flank :   CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTAAGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG
# Right flank :  CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,-0.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//