Array 1 2176011-2175122 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016353.1 Prauserella marina strain DSM 45268 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 2176010 29 96.6 32 ............................C CACGACCATCAACACCGCTGTGTTGATCCAGC 2175949 29 100.0 32 ............................. GGATCACGGTGTCGCGCGATCATCAACCCATA 2175888 29 96.6 32 ............................C TCGGAGACGACCTTGAGGACGGCCATCTTCAT 2175827 29 96.6 32 ............................T CGCTGCCGCGACGGAGGCTAGTCAGTGCCGGG 2175766 29 100.0 33 ............................. CCGCATGCCGTGCAGCACAGCCAGAAAAGCCCC 2175704 29 100.0 32 ............................. TACTTCGGGTTGGACCCTCTTGCGATCTACCT 2175643 29 100.0 32 ............................. GTCACAATCCCGGCATGGAGTTTGCTACCCGG 2175582 29 96.6 32 ............................C GCGTCACGCCGCGACCTCACGCACATCCAACC 2175521 29 96.6 32 ............................C TCCGGAGTCGCCTTACGCGGCAACTTGATATC 2175460 29 100.0 32 ............................. CCTCCTGTTCGGCGGCTACTCCGAAGGACAGG 2175399 29 96.6 32 ............................A GGTCGATCCTGACGGCGTACTTCCGCCGGATG 2175338 29 100.0 32 ............................. AAGCGCTCGGCCTGCGCCGGGTCCTTCTCCAG 2175277 29 79.3 31 ..............T........TCCGG. CGTAGAACGCGTCGAGATCACCATGGACGGT 2175217 28 89.7 37 ............T........-......C GCCCGGAGCACCCGGGTCAACGGTGCATCCGTGTGGC G,C [2175191,2175209] 2175150 29 72.4 0 ................T...ACCAGG..A | ========== ====== ====== ====== ============================= ===================================== ================== 15 29 94.7 32 GTCTTCCCCGCGCGAGCGGGGGTGTTCCG # Left flank : TCATCGTCGTCGCCGCGTGTCCCACCGGCCTGCGTGGGCACCTCACGCGGTGGCTGCTGGAAATTTCGCCCGGTGTCTTTGTCGGCACGATCAACGCGCGGGTCCGTGAACTCGTGTGGGTCCGCGTCGTCGACATGGTCAAGAGCGGACGCGCGATCATGGTGTATTCCGCCAACAACGAGCAAGGTCTCGCCTTTTCCGTCCACCACCATAATTGGGAACCAGTGGATTTCGAGGGCGTCAACCTCATGCTCCGGCCCAACACCACGTCCGATGTGGACCAGAGTCCGGCCCCACGTCCGACCGGCTGGAGCACCGCCGCCCGGCGCCGGAAATTCGGGCGTTGACTCGGCTGGGACCGTTGCCCGGCAGGGATGGCCCGAGCAGGAGGGGCGATGTCGTCTGGGCACGGTCGCATTGACGTCGGCCATACCCCAAGGAAGATCAACTCAGTCACACATAATCGATTCAGGGCGAGGTAAAGTCGCTGGTCAGGAAGT # Right flank : CCACGGCCTGACTCCGCGAGTCCCGCGCTCGTGCTCGCGAGTCCCCCGTTCAGGCCCCCGAGATCCGCACTCAGGTCGGCGAGATCCGCACTCGGCCCAGCGAGATCCGCAGTCACCGCACCACAGCCACGTGGAGGCGTTCCAAGGCGACCCGGGTGTGGTCTGAACACATCGCACGCGTTGCCAGCCAGCGCGTCTTCCCTGCGGGTGGCGCAGCCCAGCACCTCACCAAGACTCGCTACAGCGCACGTCTCAGCCTGGGAAACCCTCCCAGTACACCCGGTCCACTTCGGACAATCCTGCCAGGAGCCGGCCTAGCGATACGGCGGCCGCGCGACGGCATCCTGAGCCTCGGCCTGCTTCCGATGTCGTTTGCGAACCACCAGCGCGATCACGAGCAGCCGCAAGGGAATAATCACCCCGATCTTGTAGTGACCCTGGAACATGACCCGATACCGGCACCGCCCAACACAAACGGGAGAAACGCCAGACGACTACCC # Questionable array : NO Score: 5.63 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCGCGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2186092-2185392 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016353.1 Prauserella marina strain DSM 45268 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 2186091 30 100.0 31 .............................. GGAGCAAGGCGAGCCGGTCGGCCCCAGGATC 2186030 30 96.7 31 .............................C ACATAGGACGCGCGGTAGTGGTTCGGGACAC 2185969 30 96.7 31 ............................G. ACTCCCAGTACACGAGCACCTTCGGCAGCGG 2185908 30 96.7 31 ............................G. CTCTACGACCGACCGGACACCATCGACGATC 2185847 30 96.7 31 .............................C ACAGGAACAGCAGTTTCTGTTGGGTTTCGTA 2185786 30 100.0 31 .............................. GGTTCTTCCAGGTGTTGATTCCCTTGATGTA 2185725 30 100.0 31 .............................. CGGCCATGAGCCCGCGCACGTATTCGCGGTC 2185664 30 96.7 31 .............................G TTGCCGAGATCAACGCGCCGGTGCCCTCCGA 2185603 29 90.0 31 .....................-......GC GCCCTCAGTCCGACGCCGCGCCACCGCTCCA 2185543 30 93.3 32 ............................TG GCAGCACGGGTCCCGCCGTTACGGCAATTTGA 2185481 30 96.7 31 ............................G. TGAAGTACTTCGCCTGGTCGACGACGAGCAG 2185420 29 80.0 0 .........A...C.......C-.....GG | ========== ====== ====== ====== ============================== ================================ ================== 12 30 95.3 31 GTCTTCCCCGCACACGCGGGGGTGGTCCCT # Left flank : GAACGCCTCGTCCGGCTCGGCGTCGTCGACATCGAACTCGGCGTAGTCGCCGTCGGGACGCATCCCCCAATAGGTGTCAAGCTGCTCGCCGTTCATGACCTTCTCGAACCAACCCCGCTCGATCTCGGCCATGTGCCGCACGAGGCCGATCAGCGACATATCGGACGGCGGGACGGTCTTACGCCTCAGTTGTTCCGCGTTCAGCCCCGCGCACTTGACGGCAAGGGTCTGGCGCTGGAAATCCAGGAAACCCGTCAGGGAAGCGCGTTCGTCACCCTCACGGGGCGGATGAGTTCTCGGATCCTCGTTCATGGCCGAATCCTGGCCTATCCAGATGGGGAAGGCGACCGGGTTGTTCGTTCACGGGTGTAATTCGCTCGCGAGGAGCCCGGTTCCGGGCAACGTGGTGCGACCGATGCACCAGGCAGCCAAGTCGACGAGGTGTTGTCTCTTCCCAAAATTAATCGATTCAGGCTCTGTATACTCGCAGGTCAAGAAGT # Right flank : GTTCAAGTCCCGTTACTCACCCACGTTCTGTCTTCCTCGCGCGCCCGCGCCGCCTCCATCACCTCCAGCGCTGTAAGCATCTCTCCCCAAGGCCCGGCCGACCGCAATTTCCCTACCCAATCACCCTTAGAAATAAACCAGCACGCTCCCGAAATTCGTTATCATCCGACAGCACTACTGCGACACCACAAGAAATCACCGGATACGCCTCGGACTGGTCAGAAATGACTACATCACGCTTTGGTCACCACGGAAGAACCGAGTAACACCTGTTCCTTCTGGTGAGATATACCCGCATCAGATCCCGAAAACCGAATTGCTCGACACCATCCACTGAGGGACGCATGTCGAACGGTATTGCCTGGTTGTCGCCCTGGGGGAAGACAACGCGCGACCAGAACGGAATTGTCGAACGATGGTTGCCGCTGATACAGCACCTGGAAGACAGTGCCGGCGTAGCTCGCCTCATCGTCGACGAATGGCTTCCTCATCAGACGAGG # Questionable array : NO Score: 5.43 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCACACGCGGGGGTGGTCCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 2666408-2665705 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016353.1 Prauserella marina strain DSM 45268 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2666407 29 93.1 32 ...........................GT CCGATACGACGGCGGTACACCGGTCATCGGGT 2666346 29 96.6 32 ............................G AAGGCTGTGAGGTCGCATCGGCGGATGTGGGA 2666285 29 96.6 32 ............................G CTGGAGGACCGGTGAGCACCGAGAGAGACACC 2666224 29 100.0 32 ............................. CGGCGGTACCGGTGTGGTGCTGGTGTCCGGCA 2666163 29 100.0 32 ............................. TGGAATGACTATGATGCGAGGTTCAAACGCGG 2666102 29 100.0 32 ............................. GTTGATCGTCGCCTCATCGACCGTCAGCCAGC 2666041 29 96.6 33 ............................G GTCAGGTCGGTGGTCTACCACCGAACCGGGGCT 2665979 29 100.0 32 ............................. GTCCGGGTCAGCTCGGCCCTTCCTTGCCCCGT G [2665962] 2665917 29 96.6 32 ............................G GTGCTCGCGAAGCTTGTTCACCTGATCATTAG 2665856 29 100.0 33 ............................. CGCTCGCGCCGAGCTGGCCGACATCCGACGAGC 2665794 29 93.1 32 ...................A...C..... CACAGCAACCACACCGGCCACGGCGTATCTCG 2665733 29 72.4 0 ...C.......ATA.......A.A.C..G | ========== ====== ====== ====== ============================= ================================= ================== 12 29 95.4 32 GTCTTCCCCGCGCGAGCGGGGGTGTTCCC # Left flank : GCGGAACGCCTCGACGAGCGCGTCGGCGCCGGATGCGGTGAAGGCAACCAGCGCGTGCTCCTTGCTGGGGAAGTAGTTGAAGAACGTCCTCAGCGCGATGTCGGCCTCGGCGGCGATCTGCTCGACCGTGACGTTCTCGACGCCGAATCGCACCGCGAGCCGCACGGCGGCTTCCTGCACCGCGGCGCGGGTGGCCAGCTTCTTGCGTTCGCGCCGCCCGAGCGCCTGTTCCCTCTGGCCGCCGCTACTCTCCGACGTGCGCGAAACCATGGTGTTCTCCTCGATCCGGCACCCGGCCCGTGCGGGCGCGTGGCGCCGCGACCCGACAATAGGCCCGGCGTCCGCATGTGGCAGCGGCGGCCGGGCAGCGCTGGTGCCAGTGGGTCGTGGTGGTTCGTCTTTCTTTCGGCTTCGGCTGCTGGCTGTTTCTGTCCTCGCAAGATCAATTCAGTCACGCATTATCGATTCAGGGTGGGGTAAAGTTGCTGGTCAGGAAGTGT # Right flank : ATCTCGTCGTCCGCCAACCGCGCGGCCACAAGGAGTCAGCCGATCCAGTAGCGGCGCTTGCCCGGCCTGCCCGGCCCGGCGGGCAGCGTGTTTTCCCATCGCCCGCCGTTGGCTTCGATGACGGTCGCCGAAGCCGCGTTGTCCTCATCACACGTCACGAGAATCCGGTCCACCCCCAGCGATCTGGCGACAATCACGCTCTGGCGCAGGATCTCGGTCGCGTATCCGCGCCGCCGGTAGGGCGGCAGCACCGCGTAGCCGATGTGCCCGCCCACCCGGAGCAGCGCATCGTCGAGCGTGTGCCGCACCGAAGTCCTGCCCACGATCCGGCCGCCGACCTCGGCGACGAGCAGAGTCGCGGGCACCGTCCCCTCCTTGCGCCCTCGCTCGTCCCGCTGATCGGCCAGCAGCCGCAGATAAGCGGACCACTCCAGTTCTTCCCGTAGCCCCCATCCGAACTCGAATCCCTCGTCGAGCATCGCCCTGTGCGCCGCCCTGAA # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCGCGAGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 4403442-4403775 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016353.1 Prauserella marina strain DSM 45268 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4403442 29 100.0 32 ............................. TGGTCCTGAAGCTGGTCCCCGAGCTGGCCCCG 4403503 29 100.0 32 ............................. GCCCGACCCAACGCAGACGGTCGGACGGAACC 4403564 29 96.6 32 ............................G TCGTGGCGCGAGTGTCGGACCTGGAGGCCCTG 4403625 29 100.0 32 ............................. TTCATCCGGAGGGGGAAGTCATGAGCAGGCAC 4403686 29 96.6 32 ............................T TACTGAGCGCACCAGCCTGGTCAACCGTGCCT 4403747 29 93.1 0 ..........................TT. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 97.7 32 GTCTTCCCCGCACGCGCGGGGGTGGTCCC # Left flank : CGCGGACGTGCCGTACTCCATGTCGTCTGGGTGCGCCACGACGCAGAGCACGCGCTGGAAAGACTCCTCGGGAAGAGCAGACAGTGGCATAACGACCATCCTTCCGCCTTTCAGGTCCGAAGCTCACACCTCTGACCTGCCGATTGCCGCAGCCGACAACGACCGGCAGCGAGCCCCATCAGAGTGCGGCACGCTCACGAATAGGAGAAGCAGCGACTGGCCATGCACGCGCTCTTGCTCGAAAATACCTGCGAAACCGGAACCGATCCGGGACGAAACGTGAACACGACACCCCGCCCGGTTCGGCGGCCACGCACAAGCTGCCGAGTCGGCGACGAATTACCGAGCCTCGGCGGGCGACCGACGCGTGGAGACCGTGCGCGTTGCGAGCTACCGTTTCGACGTCCGGAAGGCGGGACCGCCAGGACCCGGCTGACAACCAGGCGGGCCCGAGCCAAACTTTTTCGATCCAGACTCGATATACTCGCAGGTCAAGAAGT # Right flank : CCCGGCCGCCGCCGCACCGTCGATGCAAGTCCCCTGCGCATCTCGCGCCGACCGAGATCGGTCAACCCTCGGTGAGCTTGGGATGTCCCACGCTCGCAGCCTCAAGCCACACGGTCCGCGCTTCGGCATCGATCAGATACCAGACGCGACCCGCTCCGGTGACTTCGATCTGCCACCGGGGCAGGTCGTCCTTGGCCTGAACTGAACCTGTCGCGAGTCCGCCTTTGAGCTGGTGGTGCCGATTGCTGACGCCCTGGCCGGGACGAGTGCGCAGGATGTCCCACGCCGTACGCAGGTTGTTCCCAGCCGTGTTGGTCAGCTTTTGCCAGCCCTTGATGGCTTCGGTTTTGGCATAGCGGATCTTCCACTCGTCGCTGACCGTAGGCGGCGCGACGTCATCACCGCGTTTTGGGCTCATGCGGTCGTGGAATCAGGGGCGGCGACCTCGCCGAGGTCGTCCCCTCGCTTCTTCAAGACCGCCAGTACCTCGGGGTCGGCGT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCACGCGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCGCGCGAGCGGGGGTGGTCCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 6222332-6222726 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016353.1 Prauserella marina strain DSM 45268 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 6222332 30 86.7 31 ..A.....G...................AG GCTCGGACTCGACATCCAGCACCCATGCCAC 6222393 30 96.7 31 .............................A CTGAGACTCAATGTTGACGGGACCGGCCTGG 6222454 30 96.7 31 ............................A. GTCACGACCGGAGCGGTGTCGCCGAGTTCGA 6222515 30 96.7 30 .............................A TCAGCCAGCGGATGATCGACCCGATGGTCT C [6222524] 6222576 30 100.0 31 .............................. AGTGCCGCCAAACCGGGCGGGCGGACATGAT 6222637 30 93.3 31 ............................GG TTCTGATGATGTCCTTGACAGCAAGGCACAG 6222698 29 93.3 0 .................-..........G. | ========== ====== ====== ====== ============================== =============================== ================== 7 30 94.8 31 GTGCTCCCCGCGCACGCGGGGGTGGTCCCC # Left flank : GACCTTGCCGCCGCCGTGGCCGCACTACAGACCGAGGTCGCGGATCTGCGCACGCATCTACAGCGGGTCGCCAAGGATGCCGCAGCCGCGCAAGTCCTCGCGCGTGGCGCCGACCGCGACGTCGCCGACCTCACCAGCGAACTGCGTGACTTCCGTACCCACAACACCAATCTGCACAACGCCACCCGCGAGGATCTGCGGGAGACCCGCCAAGAACTGCGGGAACTACGCGAATCGACCAACGCGGGGTTCATGGAGATGCGTGGCAAACTCGATGCGACCGCGGCAGGGCAGGCTCAGATCGCCGAGCTGCTGACCACACTGATCGAGCGCGGCGACCGGAACGACGCCGCCGACTGACGTAAGTGACAGCGTGACGGCGCCGCTTGTCGAATTGGCGCGGTGAACCCATCGATCGGTATGCGCTGAGCTATAGAATCCAGCTCGTACCGTGGCCAAAATTTCGAGTCTTTCGCCCGCAAACCCGCAGGTCAAAAAGG # Right flank : CTCCGCCTCGGCCGCCAGGTCCTGGACGCGCCACTCCACCGATGCTCCCCAAGCGTGTGGACCGCCCATCAAACCGGGCAAGAAAGGCAAACCCGAAACCCGGACCAAAGCCCCCGAAAACGCCCCGCACAAAGTGAGCCGACAAGGGGACTCGAACCCCTGACCTGCTGTTTACAAGACAGCTGCTCTACCAACTGAGCTATGTCGGCCTGCTCCCACTGTCACGCCGTGGTCGCGCGACCACTATATCGGCAGCCCGCTTCACGACGGCACCTGGTCGCGCGACTTCACGGGCCGGTTCAAGACCGTTTCTAGCGCTAAATTGGTCATGCGGCTTCGTGATCGGAAAACGTGGCAAACGCCACTCCGGTAAGGGTGCAACAGCGAGAGCACGTCGGTCGATGCTCCCCGGGAAACCTGCGAAGGAGGTGGGAAATGAAACTCAGGCCGCGCGCGAGAACGGCGCCGAACCGCCGGCACGCGTGGCAGATCCTGGAGGC # Questionable array : NO Score: 3.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 6488116-6488427 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016353.1 Prauserella marina strain DSM 45268 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 6488116 30 100.0 32 .............................. GGAGTGCTACTACCGAGCACTCGACGGCAGTG 6488178 30 100.0 31 .............................. GCAGCAACACGGCGAATCCGTCGTCGGTGGT 6488239 30 100.0 31 .............................. CCCGGCGACCTCTTCAGCTCCGTACGAATAG 6488300 30 96.7 7 .............................T CCTCGGG Deletion [6488337] 6488337 30 96.7 31 .............................T CGTCCGTCGAGCCATGTGGCAACTTCAGAGC 6488398 30 70.0 0 ..............T......CCCTCGT.G | ========== ====== ====== ====== ============================== ================================ ================== 6 30 93.9 27 GTGCTCCCCGCGCACGCGGGGATGGTCCGC # Left flank : CCAAGCTCGCCGAACCGGTTGCCGACATCGAGCCGCTGAAGATCAGCGAAAGCGCGCCGGCCGAGGGTGACGTCGTGCGCCTCGTCGGCTGGGGCTCTTCGGACGCCACCGCCGACCTGAGCCACCGGCCCGACCGGATGCAGACCGGCCAGTTCACCGTCACCGGGTCCGACGATCAGATCGTGAACTTCACCGGCTATCTGCCGAAGCGCGACGTCAGCGCGTGTCCTTACGACTCGGGCGCCCCGTTCTTCGCCGAGTCGGAGGACGGCACCTACGAGCTCGTCGCGACCGAAATCGGCGGCCCCGACTGCCCGCACGCGGAGGAAGAGATCGCCGCGAGGTCCGACGTGCTCCACGACTGGATCAAGGAACACGTCCGGTTGCCGTGACGTATGCCAGCGTCGCCGAGGTGGACCTGCCTCGGCGACGCGGTCCCGTGCTTGCGCGGCCGCCCAAAATTTGGCACCTTTGGCGCGCGAACACCCAGGTCAAAAAGG # Right flank : GGGCCGGTCGGCCGCGGCGATCGAACCACGGCAAACCAGATCAGCCGCTACTCCCCGGAAGACCAACCGCAACTGAAACTGAGCACCTACAACGAGAAACGGCCCTCACATAAACACTGTGAGGGCCGTCTTTGCAGGTAGTAGACGTGGCCAGGGCCGGGGTCGAACCGGCGACCTTCCGCTTTTCAGGCGGACGCTCGTACCAACTGAGCTACCTGGCCGGACACGCCGGCAAGCAGCCGAACGTTTGAAGCGACCCTGACGGGACTCGAACCCGCGACCTTCGCCGTGACAGGGCGACGCGCTAACCAACTGCGCCACAGGGCCTTGCTTGTACTGCGTACTCCCAACGGGATTCGAACCCGCGTTGCCGCCTTGAAAGGGCGGAGTCCTAGGCCGCTGGACGATGGGAGCCCAGCCGGTTCGGCGAACCGAGCGACCGCGCCCTCCAGGTCCCCCTGGGAGCGACTGTAAGTCTATGACACACCCTCAACCACCCC # Questionable array : NO Score: 5.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:-0.52, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //