Array 1 3318945-3312394 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036525.1 Rubripirellula lacrimiformis strain K22.7 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 3318944 32 100.0 33 ................................ GGTACCGCTGAGCGTCATTCGACCAGCGATCGG 3318879 32 100.0 34 ................................ TCGCAGTGACGGCGGAAGGTCTCCGGCCGATGTC 3318813 32 100.0 35 ................................ ACCGATTTCGGTTTCGGCCCGTTGTCGCAATCCAG 3318746 32 100.0 34 ................................ CGGATAGCGTTTTGTTTATCACGTCAAAAAATGA 3318680 32 100.0 35 ................................ CGGCGTGTTGATCCCAGTCAGGCGAACGTCATGGA 3318613 32 100.0 35 ................................ TGTATCTGTCGCTGGAGCAAGACGAGTTCGACGAC 3318546 32 100.0 33 ................................ CTCTTTCCATGTCGAAATCCATGGCAGCAGGTC 3318481 32 100.0 34 ................................ CAATTCTTTGTTATCGAGGTCTTGCTATGTGCAG 3318415 32 100.0 36 ................................ TTCGTCGGAACCATTGTTGCCATGGCAGTAAATCAA 3318347 32 100.0 34 ................................ AAAAAAGAATCCAACAGCGCCGCTAGGAATGGGT 3318281 32 100.0 33 ................................ ATGATCTCAACACCAGCGGGCAAGGATGCGACT 3318216 32 100.0 35 ................................ CGGTGAAAAGAAACGCCGCCCGGATCCGAGCGGCG 3318149 32 100.0 36 ................................ AAATTAACCCGACCGGCCAATCGGGTGCATTGGATT 3318081 32 100.0 33 ................................ TGATGCCGACCCGCGTCAGTCGATTTATGACGT 3318016 32 100.0 34 ................................ AAGCGGGCAAAGGTCCGGCATTCGATTCACCGGT 3317950 32 100.0 34 ................................ AGAAGATGATCGACTCGGGGTTGCCGGCCAAAGT 3317884 32 100.0 35 ................................ CGTTGCTAATCTTTCATCCGTGCAGCTAACGAAAA 3317817 32 100.0 34 ................................ TCTTGCTTCGGATGGGTTCGGACGAGTAGCCAAC 3317751 32 100.0 36 ................................ AGCTCGTCGATCAGTTGGCTTTGTCCGTCTGCCAGG 3317683 32 100.0 34 ................................ TTTGTTGTGCGGCTAGATGGATTATATAGATGCC 3317617 32 100.0 36 ................................ GCTTTTGCATTCGTTTGTTGTGCCGCCGGGATGGCG 3317549 32 100.0 33 ................................ CGATCAACGCTGACCGTTCGGCTGACGACTTGC 3317484 32 100.0 37 ................................ GCTTTTGCATTCGTTTGTTGTGCCGCCGGGATGGCGG 3317415 32 100.0 34 ................................ TCGACTTGAAGGCCGTTATCAATGCCGCTCGAAA 3317349 32 100.0 34 ................................ AGGCACCCGGTATTTCTGGCTGCCGACGCAAAGC 3317283 32 100.0 33 ................................ TAGGGACGATGAATTTTCAAACACGAAAGGTGA 3317218 32 100.0 33 ................................ CGATAATCCTGCTCGGTCAGCGGACCATCAAAA 3317153 32 100.0 34 ................................ TTTTTGCACAGGTGCCATCGCTTCAAGATCCCGT 3317087 32 100.0 36 ................................ CTTGAATGCCTACGTGTCAGCAACGGGCTGGTGGCG 3317019 32 100.0 34 ................................ TCGCAAGCCTGAACGAACGCAATCACGAACTGCA 3316953 32 100.0 35 ................................ CCGCGAAAGGATTTCGGCCGGACGAAGGCCCCCAA 3316886 32 100.0 35 ................................ ATGTTCTTCCTGATGTTTGTCGGGATGATTTGCAT 3316819 32 100.0 34 ................................ CCTGAGTTCATCCCCGAGTTCCTGATCAGGTCAT 3316753 32 100.0 34 ................................ TTTTGCAGTAGCGATTCCTCGTGTTTTAGCTGTG 3316687 32 100.0 34 ................................ CCGGCCAAGGTTCTGTACGCCGACGAACAGTCCG 3316621 32 100.0 34 ................................ TGGATCTGGAATCACGCCACTTCGAGGACACCAT 3316555 32 100.0 35 ................................ CTCCGCTCGATCCGCTCGTCATCGTCAAGATCACG 3316488 32 100.0 33 ................................ TCGCAACTCCGATTTGCAAGTTGTCCACGCCAG 3316423 32 100.0 35 ................................ GGAGCTACGATTGTCCATGACGTTCGCCTGACTGG 3316356 32 100.0 35 ................................ AAGCTGCGTGAAGCCGACAACGCGAAGTCGATATC 3316289 32 100.0 33 ................................ CAAGGTGGCGTGCGACACTTGCGGTCAAGAAAT 3316224 32 100.0 33 ................................ ACAGATGACTCGTTCGGCACCTGGATCACGTCC 3316159 32 100.0 35 ................................ GTTGTCTTCGATCCGTTCTTTCCAGTGCGGTAGAA 3316092 32 100.0 35 ................................ TCCCAAGAGAACAATCGCTGACCGTGAATCGTGCT 3316025 32 100.0 34 ................................ ATCGATCACTTGCCGTTCCTCATCACAGACACAA 3315959 32 100.0 33 ................................ CGGTCCCACCCTGCGGCAATGACGTTCCTTCGC 3315894 32 100.0 36 ................................ CCACTCGCCAGCTTCGTTCGGTTGTGCAAAGAACCA 3315826 32 100.0 35 ................................ ATCATCGCCGATTGGAGGCTTTGCCCGGTCGCTTC 3315759 32 100.0 33 ................................ AACGACGGTCGGATCCTGCATCGTCATCTGGAT 3315694 32 100.0 37 ................................ ACCGCGTTCGATCGTGGGCTGCATGCGGCCGTCCAAC 3315625 32 100.0 36 ................................ CATCAGAGATGCAATTAACGACCGATGTCTCGGACA 3315557 32 100.0 36 ................................ CGCTGGCCGTGCTGATCCCGGTACAAAAAACGGTCG 3315489 32 100.0 34 ................................ GCATGTACGGCTTGGGTGCGACGAACCCGATTTG 3315423 32 100.0 35 ................................ CAACCAGTCCATCAATTGTCCTTCGCGGCTAGTTC 3315356 32 100.0 34 ................................ CACTTTCACCACACCAACCCCGGGTCGCTGTTGC 3315290 32 100.0 34 ................................ ATCCATCGACCGTCCTGCCGGCGGCCGGTGGACG 3315224 32 100.0 35 ................................ TTCGTCGGAACCATTGTTGCCATGGCAGTAAATCA 3315157 32 100.0 34 ................................ TTCCCGGTGCTGTTTGGCTTGTTCTTCGATTTGC 3315091 32 100.0 34 ................................ GTGACGTGATCAAGCTACCGGATCCAGTCCAATG 3315025 32 100.0 35 ................................ CTGAGAAGACTAGCATTTCAATCATCACAAACGAG 3314958 32 100.0 36 ................................ TTCTTCGACGTGGCAACACCAGCCAAGACGATCAAC 3314890 32 100.0 34 ................................ AATCTGGTCTTCAACATCGCAACCTGGACTTCGT 3314824 32 100.0 34 ................................ CCGGCGATCTGCAGAGCCTGGCCAGCGATGGCCC 3314758 32 100.0 34 ................................ ACCCACACCTCGTCGGGATTACTCGGTGCGGCGA 3314692 32 100.0 35 ................................ CGTTCAGGTGCGCCAGTTCGATGATGCTCCCAGCG 3314625 32 100.0 36 ................................ CAGTGAATGCGGCGTACTCGACCGGATCTCCGGACC 3314557 32 100.0 35 ................................ TTGGCCTTCATGATCTCGATTTGCTTGATCTGGAT 3314490 32 100.0 35 ................................ AGCTTGGCCGCTGGAGCCCGTTTGCCTTCGCCGTC 3314423 32 100.0 33 ................................ CGTCAAGCGTGAACACTGAGCCTGCGTACGATG 3314358 32 100.0 33 ................................ TATTGAGCCGCCGTCGATTCGTTGACGTAGGCG 3314293 32 100.0 35 ................................ TGGCCAAGGATCGAAGGGCCTGCCACCGCATTTAT 3314226 32 100.0 35 ................................ ATCATACGGCGTGCTTACCCCATCGTCCGCTTCGA 3314159 32 100.0 36 ................................ TCGAATGCTCACTTTGCGGACCTTTCTTCAAGCCAA 3314091 32 100.0 35 ................................ ACTAACGAGGAAAGCAAAATGATTTCAGCATTGGT 3314024 32 100.0 33 ................................ TGGTCGGCGATCGGCGACGTGATCTTGCCGTCG 3313959 32 100.0 35 ................................ CGATGCCGAAGCAGGCAGCAACACGAGCGAAACCC 3313892 32 100.0 40 ................................ GTCGCCTTGGTCGCGTTACGTGGAACGCCAAGGGATTCGT 3313820 32 100.0 33 ................................ GTCGCTGCCGTTGTTTCCGTGGCAGTACAGCAG 3313755 32 100.0 33 ................................ GTTGGTGAGAGCTACAAGTTCAACTCATCAACT 3313690 32 100.0 34 ................................ ATCCCCGACAGTTTCATCGAGCCGTCTAGGAATC 3313624 32 100.0 34 ................................ AGGATAGCGACGATGCCACTAGGCTGTTTAGCGC 3313558 32 100.0 36 ................................ ACGGACCCAACCGCATGACCGCACCAGTAATCACAT 3313490 32 100.0 35 ................................ CATCAAATAAGAACGGCGTCAAAATCCTTCTCCCG 3313423 32 100.0 34 ................................ ATCGAGCCGTCTAGGAATCCACCCTCGACTCCAC 3313357 32 100.0 35 ................................ GTTTTCCGTTACGTCGATGAGGACAATCTGAACTT 3313290 32 100.0 33 ................................ CGAGAGTCGCAAGCGGATGTTCGATTCCGTTTT 3313225 32 100.0 34 ................................ CCACCATGCCCTTCTGCGACCCGTCAACGCCGCG 3313159 32 100.0 34 ................................ CTCGAAGTCCGCGTTGTCGAGCAGATCGCTATAG 3313093 32 100.0 37 ................................ CCAAACTCGCGGCCTGTGTTGGACGGATTGCGGTGGT 3313024 32 100.0 34 ................................ TGGACATCAGCCAAACCGCTGAGGTCGATCTTTC 3312958 32 100.0 33 ................................ CACACCCATGACCAGTTATTCATGCGTTAGGTG 3312893 32 100.0 34 ................................ GTCGTGACGCAGACCAGTCCGCAGGATCGGCGAT 3312827 32 100.0 36 ................................ AGCGCCGAAGCGGACGAAAGAATGGACCCGCTGGAT 3312759 32 100.0 35 ................................ CGCAGCAAGGTCGAGGTTACTTGGCCGGGCAGCCG 3312692 32 100.0 35 ................................ CGCTGACGACCCGGTTGCGATCGTGCAGGCTCACT 3312625 32 100.0 35 ................................ CTGATGCAGCCAGAGCGGGTTGTCGATTGCGAACG 3312558 32 100.0 35 ................................ CTGGTGCGATCGATGGAAACGGGACGTCATGCCAA 3312491 32 100.0 34 ................................ ATGTGCCAAGAGGACGGACCAGAAGGCGATACGA 3312425 32 96.9 0 ...............................A | ========== ====== ====== ====== ================================ ======================================== ================== 99 32 100.0 35 GTCGCGCCCTTCACGGGCGCGTGGATTGAAAC # Left flank : ATCAGCACGATTCAAAGGTGGCGTCGATGGTGATGTTAGTGACGTATGATGTGAGCACGGCGAGCGCGGCGGGAAAACGTCGCTTGCGTTTGATCGCCAAAATTTGCTTGGACTATGGCCAGCGGGTTCAAAACAGCGTTTTCGAGTTGGATTTGGATCATGCGAAGTGGGTCGAATGCCGTGCGCGGCTGCTCGATACGATGGAGCCGGAGGAGGACAGCCTGCGTTTCTACCGGCTGGGCAATCAATGGCGTGAGCGGGTGGAGCACATTGGCACGAACCCCTCAACGGACCTCAGTGGCGGGACACTTTTGGCGTGACCGCGAACGTGAAGCGCCCACGCCAAAGCTGGCTGGTTCGCGAAAGCGGTTTCAAGCCCGCCGGGGCGGCACTTCAATCGATAGCGTCTGATCAGGAAGCCGGGTAATGCCGCACTACACGCCTGGTTCGCGAATCGCTACGTTTAAAGGCAACGGTGGCTGCGTCGAACGACCACCGCA # Right flank : TCGACCGTACTTGTTTAACGAGCGGTGTTGGGTAGTGGCATCGCCAGCGGGCTGGTCGCGGTCAGTTGACGATAGATAAAATCGAGGGGGCCGGCCAGTCGTTGTCTGCAGGTTTGCATCACGCTCACGATTCTTGATTAAGCAAGTGCTCCGGTTTTGGTTCGATTGCACCCCAGACTTTTCGATACACGACCGCTAGACGGATGGCTTGCTCGCCTCGCCAGTTCGTTGCAGCCGCACCGGGATGTCGCAATAACGTGAACAGGTCGTCGAAATGATTTGCAAGGAACTTCGCGAAGCGTTCGCTACCGCGGTGCGTTTTCCGATGGAGGACCAAGTCCCACATCTGCATCGTCAATCGCCCGGCAATTACCTTCATCCCATGAGCGGTCATCGCATCTCGCCGAAATCGGATACGGCATTCGAATGCCTCGAGCAACACGTCATTCACTCCACGCCGAAATGCCAAGTACCCGCGTCGATACTGAAATGTCGATTGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCTCTTCACGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.70,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 5635211-5637275 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036525.1 Rubripirellula lacrimiformis strain K22.7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 5635211 36 100.0 36 .................................... GTCCCGGCCAGGTTGGCCCCGGACAGGTCCGCCCCG 5635283 36 100.0 36 .................................... TGCACTCACGACGCATATAGGAATAATCGTCTCTTT 5635355 36 100.0 36 .................................... CGTGTACTGACGCTTGCCATTGGCATCCAAAACCGG 5635427 36 100.0 35 .................................... TTAAGCACCTGCATCGACTCGCCGGTGCGCTTCGA 5635498 36 100.0 34 .................................... TAGTTTTCAAAACAACTTTCCTTGTGCGTTTCCA 5635568 36 100.0 35 .................................... CAAAACACCTCGCGTCCATTTCGGGGCGTGTATGT 5635639 36 100.0 36 .................................... GTGTGGTGCGTTGTCGGATGCACTTTCGGCGATCAT 5635711 36 100.0 40 .................................... GAGTTACTAGAAATCGGACCAGTCTCAATGCCAGCCATGA 5635787 36 100.0 36 .................................... TTCTTTCTTAAGCACTCTGAACTAATAATTCCTATT 5635859 36 100.0 36 .................................... CGGTTTCGCGTTCCCGTTCTTCGACCGCGGCAATCA 5635931 36 100.0 37 .................................... CGATTTGAGTTCATTGAAGACGGTGGTGGGGCTCTCG 5636004 36 100.0 37 .................................... TCGACAAGAAAATGGGGCAATACATCCAGAAACCCCG 5636077 36 100.0 36 .................................... CCGCGATGGAAGGCGGCCGTCGTTTTGTCGGTTGCG 5636149 36 100.0 36 .................................... ACCTAGGAGATCGAAGCCTTTAAGAGCAGCGCCGAT 5636221 36 100.0 38 .................................... GAATCGTCGTGCAGCGTGCCAGGCACGTAGCTAGCCGT 5636295 36 100.0 36 .................................... CTTGGATGCTTGTGGGGATCCGCGAACAACCAGACC 5636367 36 100.0 37 .................................... AACGGCGAAGCTGGCGTCGAACACACCGTCAGGCACG 5636440 36 100.0 37 .................................... CCATCATTGCTGTTTATCAATTCACGGACCCAACCGC 5636513 36 100.0 37 .................................... TCGATCAGTGACGAACCGGACGCGTTGCCCACCGCGA 5636586 36 100.0 38 .................................... CTGGAGCAGGTTTCCGCGAGGCTGCTGCTGGAAACTGA 5636660 36 100.0 37 .................................... CTGACACCCCCCACAGATCGACGTCGCCAGATCAACA 5636733 36 100.0 37 .................................... CCGTTTTCCTACCGCGGGCGTCACTGACTGGTCATCG 5636806 36 100.0 37 .................................... ATCGACAGTTTGCCGCTGATGATGTGGTACGTCTGCG 5636879 36 100.0 36 .................................... ATCGCGGCGCTGTTCGACTGTTACCGGGCCCAGCGT 5636951 36 100.0 36 .................................... TCGGGGATGCACTCCGAACGAACGATCTACTATTTC 5637023 36 100.0 36 .................................... GGATCAACCGAATCCAGGACAGACCGCACGATTGCT 5637095 36 100.0 37 .................................... GCGTCGTTGTCGTTGCACCACTCGATGATGCGAGCAC 5637168 36 100.0 36 .................................... TTGCCTTCGTAACTGTCCGCGAAATAGTTTGCCATG 5637240 36 94.4 0 ...........................T.......T | ========== ====== ====== ====== ==================================== ======================================== ================== 29 36 99.8 36 CTTTCCACGAGTTCAAACTCGTGGCCTCATTGAAGC # Left flank : CAAGTCAAACCGGGCAAGCCGGCGCTTGCGTTGGATCTGATGGAGCCGTTTCGTCCGCTGATCGCCGAATCGGTGGTCCTCTCAGCGATCAATACGAAAATGGTCACTCCCGATCATTTCATCTGTGCCGGCAAATCGGTTGTGATGAGCGATACTGGGCGGAAGCATTTCTTGTTGGCCTACGAGAAACGAATGGATTCACTTGTCACTCATCCGCTGTTCGACTACCGAGTGAGTTATCGGCGTTTGCTAGAAATCCAAACGCGCCTGCTGGCTCGTCGCCTGAGCGGTGAAATTGAGGACTATCCGGTTTTCCAGACGCGTTGAGGATGCGAGCGGCGAGGCGGTGAGCCGAACCCGGCCCCCGCTCGCAAACCTGCAAAATGCAGTAAAAGAAGTCCTCTGCACGAATTCTCCCGATGCAAGAATCCATGGAATCCAGCGACCGCTCGCAAAGCTCCTCAAAAACAACCATAATCGTGCACTCAGAAAGAAGAGCT # Right flank : TCGGTGACGGGCGATGGTCGTGCAACACCCGGCCCCTCACCCAACACGCTGGCGGGGGCTCGCTGGGGCGATTCAGGCGATCTCCGCCTCGCTTACGGGATCAGCCAGAATGCACCGGTGACGGCGGCTGTTTGATACAACGCACCTCGCAGGCTGATCGGTACCGGTGGTTTGATCCACGGTGCACAATTGCCTGGTCGGTAGTAGCCAAGCGAATAGGTGCATTCGTTCGGTGCGTGCACTCCCATCTTGTACGGCAGCACGGCGATGTTGCCAAAGAAGTGTGCAGTCTGAACGATAGGCTCTAGCACAGGCCCGCGAGTGTGACCGTATCTTTCTAGGTTGACATCTTCGAAGTACAACGGTGTGTGGCACAGATTCGAAGCCTTGTAGGTCATCGTCATCGGTGTCCAAGCACGCGGCGTGTAGGCCACTTGTTCGATCAGACATTCCGTAGGCAGTCGCCAGTTTTCGGAGATGTACGCCAAGTCGGCTTCGCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCACGAGTTCAAACTCGTGGCCTCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.40,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //