Array 1 49752-44290 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQZG01000018.1 Arachnia propionica strain OH887_COT-365 scaffold_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 49751 29 96.6 32 ............................A GGGCCGCCTTGTTGAGTGCGTGCAGGCGCTTG 49690 29 96.6 32 ............................T CAACGCCCTCAATTCGACGTTCGACCGTGCCG 49629 29 96.6 32 ............................T AGCCAGCCTCTGCCAGGAGTGCCCCCCGTCCG 49568 29 100.0 32 ............................. CTGCCGGACGACCAGGAGTTCACCGTCCAGGT 49507 29 100.0 32 ............................. TGTTGCCACCGGAGTTGCAGACCCGATTCGTC 49446 29 96.6 32 ............................A ACAGCAATGAAACCATCAACGATTCCACCGAC 49385 29 100.0 32 ............................. GGCGAGGCTGTCCTGTGCTGGATGCTCGTAGT 49324 29 96.6 32 ............................C GGCCCCCGCGTCGCCATCGCCTCCGCCGACAT 49263 29 96.6 32 ............................C CCTCAGCCCCTGGGGCGTGACACGGGGGACCC 49202 29 96.6 32 ............................C CACTCTTCCACGTTCTCGACGATGGCGTCGTA 49141 29 96.6 32 ............................C CGGTGGGCAAGGTCGCGTGCACGACCACCCGC 49080 29 100.0 32 ............................. ACGGCCCGGTCGGCGGGCACGTCGGGATGGGG 49019 29 100.0 32 ............................. GGTGGCGATCTCAGAGCGACGCAGCCCTGCCC 48958 29 96.6 32 ............................C GACGCCGCGATGCGTGGCGTGCCACTGAGTGT 48897 29 100.0 32 ............................. TATTTCTCGTAAGGACGAAACGGCCCGACCGG 48836 29 100.0 32 ............................. CGGCTCCTCGGACAGTGGAGCGGGCACACCCT 48775 29 100.0 32 ............................. ACGCGTGAGCTGGGGGCGGCGCGCCCGAAGGG 48714 29 96.6 32 ............................T CCTGGTGCCGACGTTCAGCAGCTTGGTCTTCG 48653 29 96.6 32 ............................C TCCTGCTGGTTGATGCCGACGACGCGCCTGAT 48592 29 96.6 32 ............................A TCAGCGGAGCCGATGGAGGTCAGCAGCGATGC 48531 29 100.0 33 ............................. TTCTCCCCCGTCGGTGTCGGCGTGCAGCTCGAC 48469 29 96.6 32 ............................C CCCGGCCGCCTGATCGCTGACCGGCCCCGGCC 48408 29 100.0 32 ............................. ACTTATGCCGGGAATGTCTGGGGTGCGATCAA 48347 29 100.0 32 ............................. TGGTGGTGCTCATGGACGAAATAGTGTCAGCC 48286 29 100.0 32 ............................. GTCGGAAACTCCTACGACAGCAACGCACAGCA 48225 29 100.0 32 ............................. CCTCTCGACTCCTTCGCGGCCTGCTCGAGGGC 48164 29 96.6 32 ............................T CCATCGGTTTCACCTCCCCTCTTGAGTTGTTG 48103 29 100.0 32 ............................. TAGCAGGTGCGCAGCCTGATGGTGAGGGGTCG 48042 29 96.6 32 ............................C ATTTCCCCCTCTGCTGTCGCGCCAATCATTGG 47981 29 100.0 32 ............................. CATCCGCAAGCCACGCGTGGACGGACGTTCCC 47920 29 100.0 32 ............................. CGCCACGGCCTCGACAGGAAACCCGGCACGCA 47859 29 96.6 32 ............................C CTCATCGTGCGGGTTGATGCAGCGGACGCCGC 47798 29 96.6 32 ............................C GGTCTCGACAACGGTTTGGACAGACATGTCCC 47737 29 96.6 32 ............................C TCCGCAACAAGCTGCATCACCTCACTGAGGCG 47676 29 96.6 32 ............................T GGATGGTGTCTGTGCTGCCGGTGGCCGGGAGG 47615 29 96.6 32 ............................C TCAGGGAGATGATGGGGCAGGTCATCGGCCTG 47554 29 100.0 32 ............................. CTGATGTCGAGGGCGTTGCCGGGTGGCTGGAC 47493 29 96.6 32 ............................C CCTCGGTCCCCTCGGTGGGGGTGTTGATGGCG 47432 29 100.0 32 ............................. CCCTCACCGCGTTGACGCCGTTGGGGCAGACC 47371 29 96.6 32 ............................C GGTGCTGGATCGGATTCTCCACCGCGAGCAAC 47310 29 100.0 32 ............................. TCGTTGATGATGCTGGTGAGTTGTCGTCCAGC 47249 29 100.0 32 ............................. ACATGGGGAAGCTCCGAGAAGCTGCCTTGCAG 47188 29 100.0 32 ............................. GTGGCGTTCTGGGTCCGGCCGAGCCGGTCGAC 47127 29 100.0 32 ............................. AAGCGCGGGACAAGGTCCGGGAGTGTTTCATC 47066 29 96.6 33 ............................A TGACCCATGCCTGCAACCAGCCCTCACGGGCTC 47004 29 96.6 32 ............................C GGAACCTCATTACGATCACCCCGACGGAGTGG 46943 29 100.0 32 ............................. GTTTCACCCCCATCCGGGGTAGCTGCTCAGGT 46882 29 96.6 32 ............................C ACCTTGTGTTGGCGCTCGGCGTGACCGACGAT 46821 29 100.0 32 ............................. TCCTCCTCGATTTCTGCCCCGGTGTAGTCTTC 46760 29 100.0 33 ............................. TGGTGGTGCTCATGGACCGAAATGGTGTCAGCC 46698 29 100.0 32 ............................. ATCAGGTCGCGCCGCGCCGGATACGCGGCCGC 46637 29 100.0 33 ............................. ACGACGTGGTAGATGATCTTCCCCTCTCGGGGG 46575 29 96.6 32 ............................C GGCAAGCTGGCGAAGGCAACCGGTGTCGGCTA 46514 29 96.6 32 ............................C GGGCTGGTGATGGTGAGGGTCGCATGAGTCAC 46453 29 96.6 32 ............................C AACCTGAATCCTGCCGAGCGGTACGCCGCCCT 46392 29 96.6 32 ............................T GCCGACGGGACCTCTCAGGCCGAGATCGCTGA 46331 29 100.0 32 ............................. GCATCCCGCTCACCGACTCCCCCTGGGTCGAT 46270 29 100.0 32 ............................. TCATCCACTCGTGTCCCCAGGCGGGCTCGGGA 46209 29 96.6 32 ............................C TCCTTGCCTCGGCCATCCGATGGATCGGATTG 46148 29 96.6 32 ............................C TGCTGCTTGACGCCACTCATGTCCGCGGTGTC 46087 29 100.0 32 ............................. GACTGGGTGGCCGACACGGTTGGCATTCCCCG 46026 29 100.0 32 ............................. TGCACGACTTGCACAGTTTGGAGGCTTGACAT 45965 29 100.0 32 ............................. GCGTATCCGGTGACCGAGCCCATCGTCACCAC 45904 29 96.6 32 ............................T TGTCCCCGTTGAAATACATCCGAGGATTTCCG 45843 29 96.6 32 ............................C GCAACGTCTGGATCGCCGACCAGCAGCCCGGC 45782 29 96.6 32 ............................C CGATTCAACAACGTGTCTGACAGCCATGCCGG 45721 29 96.6 32 ............................A TGTCCGACGACATGACCAGTAACCGAGAGGTA 45660 29 96.6 32 ............................A GGACCCATCATGATCTGGACCCGAGCCTTCTG 45599 29 100.0 32 ............................. GGTGTCTCCGGGAGGGGTGCCAGTATGGGGCA 45538 29 100.0 32 ............................. GTGACCACCACTTCCCCGATCGTGACGCGCCC 45477 29 100.0 32 ............................. GCAGCGGGCGGGTGCGATAGCGCACCTTCACC 45416 29 96.6 32 ............................C CTGAAGGCACATTTCCTTACCCGACTTGAGCA 45355 29 96.6 32 ............................T CGCTGGATGAGGCGCCCGGCCCCGTCCAGCAG 45294 29 96.6 32 ............................C GCCCGCATCGACCCCAGCCACGCGGCCCGAGT 45233 29 96.6 32 ............................C GCCAGGTCATGCGCTCCCGGCGACACGCGACG 45172 29 100.0 32 ............................. TGTGATGGTCTCAGGTTCGCCAGCCAGTCCGG 45111 29 100.0 32 ............................. TGTGATGGTCTCAGGTTCGCCAGCCAGTCCGG 45050 29 96.6 32 ............................C ACTCGGGATCAGTCGAGCAAGACACTGATCCA 44989 29 96.6 32 ............................C CGCAACCCCGAGGTTTTCGCCCCGGCGCGCCT 44928 29 100.0 32 ............................. GGCATCGCGGACCAGTTCCGCAGCATCCTCGC 44867 29 100.0 32 ............................. CGGCTCAAGAGGCAGCCGTGGGCGGGTGTGGT 44806 29 100.0 32 ............................. CACACCGCCCACTCCAGGGTTTTCCCCGGCAA 44745 29 96.6 32 ............................C AAGATCTGGAAGCGCCGCTACCGGGGGCAGGG 44684 29 96.6 32 ............................C CCTCCCCCAATGCGACGAATCGTCCCGACGGG 44623 29 96.6 32 ............................C GGATCGATCATCAAGCAGTGAGTCCCTTGTTT 44562 29 96.6 32 ............................C ACCACCTGCAAGACCTGACCAACTGGAAACTC 44501 29 100.0 32 ............................. GAGATCGGCGGCCCATTTGATGGTGCGGATCG 44440 29 100.0 32 ............................. TCCTAGGATATTGGCCATCACCACGGTTGCCA 44379 29 96.6 32 ............................C AGCTTGGACAGGCGGCGCTTCCCTGCGGGACC 44318 29 93.1 0 .........................A.A. | ========== ====== ====== ====== ============================= ================================= ================== 90 29 98.1 32 ATGTTCCCCGCACCAGCGGGGATGATCCG # Left flank : CCTTCCTCATGATGAGATCGACTGGGACATCAACGTGATTCATCTGTGGGACGACAAGGCGGGAGCGGTGACAGGAGGTATCGACTACAGCGAGGTGGATTTTTGATTGTCCTGGTACTGAGCAAAGTTCCTCCCGGCCTGAGAGGACATCTCACCCGCTGGCTTCTCGAGGTCTCTCCCGGGGTTTTTGTCGGGAAAGTATCTGCTCGGGTACGAGATGAATTGTGGTCGCTGACAACCAGTGAACTGCGGGACGGGACAGCGATCATGATTCTACCAGCCCGAAACGAACAAGGATTTGAAATTCGGAACTCGGGTCACCGCTGGACTCCGGTGGATCTCGACGGTTTCGTCACCTTGAGGCGTCCTCCAGCCAACGACACCTCCTCACCCGCGGTCAAGGCCCCACTGCCCAAGGCCTCCCGCTACCGCTGGCTACGCTCCAGACGAAACCCATCGTAAAACGTGGCCCGTCATGGTATAGTACCTAGTCAACAAGT # Right flank : GAAAGGCCGGTTCCGAAAGACCAGCCGCAAGGTTGCTCCCCGCGTTGCGGGAACACCACTGGCTCTTCACCTCCGGTGGCTCACACCCGGAGCACAAGAGCGGAAGGACTGCCAGGTCGAGACTTGGACGGAGAACTTCATCGGACACTGCCCCCGGCCTCGCCACGGAATGCTGTCTCACGGTCCGTTGTGAGCAGTGACGGAGAGCAATCGGCAGGACTTCAGCCGCCCATCACCCCGGCGACCACGATCACGACTCCCACGACCACTCCCAGGAGGCCGAAGAACTGCATCGGGATGCCGTAGAGGGTGTGGTTGTTGCTCGTTGCCTGCCGGATGTCGCGCACCTCGCGGGCCAGCAACGCCTCGACCTGGTCGTGGCCCTCACGACGACTCGACGGGTCAGGCGCCGCCGGCGAGACCTGGAACTCTCCCGCATCCACCAGCTGCTGCAGCTGGGCGCGACGCGACGCCTCGAACTCCGCGACCCTGCGCCGCGG # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.65, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGCACCAGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATGAACCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 9221-8535 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQZG01000010.1 Arachnia propionica strain OH887_COT-365 scaffold_9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 9220 37 100.0 32 ..................................... TCGTCCCGATACGTTGGCCATGCCGGACCCAG 9151 37 100.0 32 ..................................... AAAACTTCATCGCCTATACAGGTGACTCTCAG 9082 37 100.0 35 ..................................... TCGTCCCGCACCATCCCGGCCGGGAAGATGAGGTC 9010 37 100.0 34 ..................................... AACCCCCGGGGCGACCTCGGCCCGATCACCCCAC 8939 37 100.0 37 ..................................... TCGTTGAGCCAGCGCTCAACGGTCTCCATAGCCGCCG 8865 37 97.3 38 ......................A.............. GGCAGCGACCATCTGGGAGACGATGAGGAACACTCCCG 8790 37 97.3 39 ......................A.............. CCGGCATACTGGGCCAGGTCGTACCGGTCTGCAATTTCA 8714 37 97.3 36 ......................A.............. GTGTCGGGTGGGTCGATCTCGATCTCCCATGTGCCC 8641 37 97.3 31 ......................A.............. GGCGTGGCTCTACCGTTGAGCTACATCCCGG 8573 37 81.1 0 ......AT.G.TT.........A.......G...... | G,G [8539,8565] ========== ====== ====== ====== ===================================== ======================================= ================== 10 37 97.0 35 GTCTGAGACACCCGCGAGAACCGAAGCGGATTGAAAC # Left flank : TCACAGGAACATCCGTCGCGCGCAAGGACATGTCAGACGAATGCGCAGACGCCGTGTGTGATGACCTCGCTGAGGTACGACGAGATGACTGGATCGGCTTCACGTGCTCATGCCCCATGGCACGGGTGGGAACCTCCTGCCGTGAAAGTCCTCCCCACGCTGACGGCCCGGGCTGCCGGAGCGGAGACCCCATGATGAGACCTCGACCGCGTTGCAGCGAGACCATGAGGTGGCGTGAGTACCTGTCGGTCCGTGAGCAGAGCGGAGCGGGGCTGTACTGTGGTGAGGCAGGAGGTGAGGATGGCTGTCCAAGGTCTTGCGACACCCCTCAAACAGGGTGGTCCCGGGATGAGCGAAAACCCGCCGAGGTGTGTATGCCACCTGACAAGCCCAAACACCCGTTTTTGGCCCTCTGGGGGCCTCCGCGACACGCCCGAGACAGCCTTGGTGTGCAAACGGTCCGCAAACCCCCTTGTCAACCGGCCCTCCACAGGGGTAGG # Right flank : TGTTGACCGAAGGGTTGCCGGTTCGAGCCGCTGTGAGGTCTTGAGCAGGCGGTTCGGCCAGTGGGTCCGGTCTGCGTTCCGGGTGACGGGAACAACGGCATCGTCGATGTCAGCTGAGAGGATGGAGTGTGGCCAGAACTGATACATCGAGGGACAAACCGTCCTGGTGGCGTTCGTGCTGGGAGGAGATCAGGCGGTGTGCCCGCATTCTCCTCGGCAGGAGCGACGTCGGTGCAGCAGGTCTGCCGTGGCACGGGCGGATCGGGCGGCTGTGGGTGCGGCTCGGACGCTTCGATGACCAGGGCCGCATCCGTTGCCTGCTCAACCGCCGGGTGGTGCCAGGTGGCTCGGCAGTGGTCTTCCTCAGCCTCACCTTCCTCCTCGTGCTGGCCGGGGGCGATGGGTGGAGCGGCATCACGCAGGGCATGTTCATGGGTGCCCTGCTCACAATCGGAGGAGCGACGGCCTGGTTCCTGCACCGTGGCGTCCCCCAGTGCAAC # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:0, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAGACACCCGCGAGAACCGAAGCGGATTGAAAC # Alternate repeat : GTCTGAGACACCCGCGAGAACCAAAGCGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 2 11463-10633 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQZG01000010.1 Arachnia propionica strain OH887_COT-365 scaffold_9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 11462 37 100.0 31 ..................................... ATCATGACGCAGGGGCACTCAACCCCTGCGT 11394 37 100.0 33 ..................................... CGCTCTTCAGGTGGCACCCCATGAGATCCTCGC 11324 37 100.0 39 ..................................... CTCGCGCCCGGAGGTCGCCCATGTCGCTACCTGAACCAA 11248 37 100.0 36 ..................................... CTCTCCTTCTCCGATGTCCCGAGGGTCTTTGTCGAG 11175 37 100.0 36 ..................................... AGGCCTGGCAGTAGATGTCGTCACCGTCGACGACCT 11102 37 100.0 34 ..................................... ACTTTTGATAAAAGTGATTCGGCTCATAGGGATT 11031 37 100.0 36 ..................................... TCGTCGCGGACCCAGGCCCGGAGGTTCTTCTCGCTC 10958 37 100.0 34 ..................................... GCCATGCCATAGCTGTGAGCAGCAAGTAGCTCCC 10887 37 100.0 34 ..................................... ATACCGGATCGCCCCCATGGTCGGGCCAGAACAG 10816 37 100.0 37 ..................................... CGGATGTCCTCACGGACCCGCGACTTCACCTCTTCAG 10742 37 100.0 36 ..................................... AACTCAGCACGGAACTCCTCATACGTTTGCCCACGC 10669 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 12 37 100.0 35 GTCTGAGACACCCGCGAGAACCGAAGCGGATTGAAAC # Left flank : GGTCCACCTTCGTCGGTTGCGGTGAGCCTCCGAACATCGGTGTGATGGTGGAGAGCACGATCGTGTGTTCCCGGGCAGCATGCCTGGGCAGCACGTCCGAGGGGTTGAGAACCGGGGGAGCAACCCCCGGTGGCTTCCGTGCCATGTTCACTCCTTTCGAGTCTGTTCGCGCTGTACATCTCACTGACGGACAGGCCCCCAGAGGTCCCGGGACATGGCATCCTGAGCAGGTCACAGCAGGAGCTGAGCAGCGGGACCGCGTCCAGGCACAGCTGTGGCGGGATGACACGGGAGGTGAGGACCATGGCAGCCGGGACGTGCGACACCCCGGGACAGGGTGGTCCCGGGATGAGCGAAAACCCGCTGAGGTGTGTATGCCACCTGACAAGCCCAAACACCCGTTTTCAGCCCTCTGGGCACCTCCACGACACGCCCGAAGCCCCTCCGGTGTGTAAACGGCCCGCAAACCCCCTTGTCAACCGGCCCTCCATAGGGGTAGG # Right flank : CGACTGTCACTCGCACCAACCGGAACGCTACCTGTCTGAGATACCCGCGAGAACCTTCTTCCCGCTGGTTGAGCCGGGTCTTGGCTCAGGTTGTCCCGCACACTTGCCCCTCCGGCTCGACCAGTGGGGGTGGCCGGGTTTTGACACGGTGGTGCTGGGGCTGGGCTGGGAGAATGTCGTTGTGGTGGTGGACAGCGATGAGTGTGGTCCTGCCAGGGTGCATGCCTGCATGGCCACGTACGCGCAGAGCAGGAGGTACCGGGACAGGGTGGTGGCGGACAAGGAGCTCCGGGTCGCCCTGGAGCAGCTGGACCGGCAACGGTTCCCGGGTACCTGGGCGGCCGGGATGTTCCTGGTCGTTCAACTCGCCGTGCGATGGTTCTCCCCTCGCCCCGAGGTGATGGTCCGGGAACTGGTCGAGGTGTTCGCCCAGGCCGGGCGGGATCACGGACCCATCTGGTGGTTGGGGAGACACATCACCTCGGTCGAGCTGCAGGAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAGACACCCGCGAGAACCGAAGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : NA // Array 3 20225-20975 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQZG01000010.1 Arachnia propionica strain OH887_COT-365 scaffold_9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 20225 37 100.0 33 ..................................... CCCGCACCACATGCAGTGATACTCTTCCCCGGC 20295 37 100.0 32 ..................................... GTCAGTCGGACTCAATCACCCGGAAAGTTCCG 20364 37 100.0 35 ..................................... GAACGGCCACAAGAGGGCGGTCCTTGCCTTCTCTA 20436 37 100.0 36 ..................................... TGGCCATCACTATGATGGCCCAAGTAAACGCTGCCG 20509 37 100.0 42 ..................................... ATGTAGCCCACACTAATGAAATTCTCAAGCATCTTGCGCCCG 20588 37 100.0 33 ..................................... CGTCTGACACGGAAAGGGTGACTGTTGGTTCGC 20658 37 100.0 37 ..................................... CCTCGTGACACCAGAAGGCGATCGCGTGTTGCAGGTC 20732 37 100.0 32 ..................................... ATCTGCTTCGTCGTCGACCGGTCGATGTTCAG 20801 37 100.0 33 ..................................... GCCCTGCTCATCCCGCACCATCGAGATGGGGAA 20871 37 100.0 31 ..................................... TCGCGGGTCCAGTACATGCCCTTCCCATCCA 20939 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 11 37 100.0 34 GTCTGAGACACCCGCGAGAACCAAAGCGGATTGAAAC # Left flank : CCCCTGAGGCGGTGCTGGGCAGCATTCGCCGTCGTCTGGTCGAGACGTGGGGGTGGGAGCCGGAGGCTGCTGTCATGCGGGAGGCCGTTCGGGCCGTCGCCCCGATCCGGACCGAGCTGACCACCCGTCGGTGGCGGGAGGGTCGCGGTGGCCGGGGGCGTGATGTCTCCTTGGCTGTGGGAGAGCTCGAGTGGGTCGCCAGTGGGGATGAGGAGATCCGGGCCATCGTCGATCTGCTGCTCCGGGCGGGTGAGCTCACAGGAGTCGGGGCCAGGACCACGTGGGGAGCAGGAGCCCTGGAGGTGACCCGTCCCTCTTCTGCAACCCGATTGCAGAAGGTGGTCCCGGGATGACCGAAAACTGGCTGAGGTGTGTATGCCACCTGACAAGCCCAAACACCCGTTTTTGGCCCTCTGGGGGCCTCCGCGACACGCCCGAGACAGCCCTGGTGTGCAAACGGTCCGCAAACCCCCTTGTCAACCTACCCTCCGGCGGGGTAG # Right flank : CGTTGCGTCGATACCGGGAGTGTCGAGCGAGTGACGAGCTGAGACACCCGCGATCCTTCAACCCCGCTGGTCGAGCCATGAAGCAGAGCGAGCGCGTCGAGGCCTCAGTGCCGTGTGCTGGGGCTCATCGCCGGGGTCTCGAACCGGACTGCTCACTGAGGCTCGCGGTCGGGCTCGACCAGCCGAGGAACGAGAACACCACCATTCGTACCGTCGAGGAGGACATGATGAGCACTGAAGCTCTTCACCGCTCCGAACCACCGACCTGTCTGCAACGTGCCGCACTGGCTCGGGCGTGGGAGCGAGTGCTGAGGAAGGACGCACAGGACGGGGACCTGAGCACCGGTGTGGAACGCTTCGCCGAGGATGCCGAGGCACATCTCGCCGCGTTGGCGGATGAGCTGGCGGACGGGACCTACCGACCCCGGACCCTGTCCAGGGCGGTGATCCCGAAGAAGGGTGGGCAGCGTTTCCTGGACATCCCGCCGGTCAGGGACCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAGACACCCGCGAGAACCAAAGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [13,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : NA //