Array 1 950666-945877 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP017896.1 Actinomyces sp. Chiba101 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 950665 28 100.0 33 ............................ GGCCCGCGCTATCAGCGCCGAGCTCCGCTCCAA 950604 28 100.0 33 ............................ CGGGCCCCGCGACCTCTCAGTCGTGGGGCCCGT 950543 28 100.0 33 ............................ GACCCTAGGGGCGGATCTGGCGTGGGTAGAGAT 950482 28 100.0 33 ............................ CTGTTACCGCGATCGAGGCCGCCCGTCGCTCGG 950421 28 100.0 33 ............................ GGTCCTCAAATCGTCGGGAATCAGACAGATACA 950360 28 100.0 33 ............................ CGCAATCACATCGCCGGGCTTGGTCATCAGGTA 950299 28 100.0 33 ............................ TACGGCTCGATTCTCATCACCCGATGAATAACT 950238 28 100.0 33 ............................ CGTCCGCCGAGGCTCCAAGCGCTTCGAGGACAA 950177 28 100.0 33 ............................ CTCACACCCCCGTGCCGTAATCCCGGTCACAGC 950116 28 100.0 33 ............................ TGAATGTCATTTGCATTACCCATTCGAGTAGGG 950055 28 100.0 33 ............................ GGCGACGCGACCATCACGGGGCGCACGCGTCAT 949994 28 100.0 33 ............................ GGGGGGCGCTGAGACGGACGTCACTCCGGGCCG 949933 28 100.0 33 ............................ CATGGGGCGTCACTGCCGCCGTCATCTTGGTTC 949872 28 100.0 34 ............................ ACCCCCCCGCCTCCCTCGACGCCGGGGCGCTGGA 949810 28 100.0 33 ............................ GAATCTTACTGTCCATTGCTCCTCACTCTCCCC 949749 28 100.0 33 ............................ CCCGACGAACAACTCAACAGAGAGGAGGCCCAT 949688 28 100.0 33 ............................ CGACGACTCGGCGCTCCGGGCCGGCCTCGGCAT 949627 28 100.0 33 ............................ GCACCACCGAACCGAAACTCGCCACCCGCCCCG 949566 28 100.0 33 ............................ CATCCCCACCAGCAGAACGGAGCCCCCCTCATG 949505 28 100.0 33 ............................ CTGCGGCGCCTCCAATGGGTCGACGACTATCTG 949444 28 100.0 33 ............................ TGCGGGCGGCGACCGCATCGAGATCTCCTCGTC 949383 28 100.0 33 ............................ CAAGAGCGCCTACCTCGCCGTCGCGCGAGCCAA 949322 28 100.0 33 ............................ GGTCCGACCTGCCCGACGATGTTCGGGAGCATC 949261 28 100.0 33 ............................ TTGCCGGAAAGGCTGTTCTCATACCGCAGGATA 949200 28 100.0 33 ............................ CACCACGCCAGAAAGTCCTCGTGAACATCAAGA 949139 28 100.0 33 ............................ GATCGGGCAGACGTCGGAGAAAAGCCTCCGCAA 949078 28 100.0 33 ............................ CACGGCGACGATCAACGGCGGGTCCATGCGTGC 949017 28 100.0 33 ............................ CATCGTCGTTGGTGAGCCAGCCGCGTGCGCCCA 948956 28 100.0 33 ............................ ATCGTATGGTGCCAAGAAGTTGGCGATCCGGAA 948895 28 100.0 33 ............................ GGTCGACGGGGCCGGGCAGGGGAGAGGTCGAGC 948834 28 100.0 33 ............................ GATCGCCCCAAAGAGTAAGGAGAAAGCGCTTGG 948773 28 100.0 34 ............................ CCGGGGGGGGATTCTGGGAACGCGGAGAACGAAA 948711 28 100.0 33 ............................ CCGCTCCCTCATGCGGACCACCGCCCTGCAGCC 948650 28 100.0 33 ............................ CGGCGTGATGTTCGTGATGCGCGATACGGGCGG 948589 28 100.0 33 ............................ GGACGCCCGGGGTCTATCAGGCGCCGTAATCGA 948528 28 100.0 33 ............................ CATTAGCGGGTATTTTCAGTTGACCCGTATTCG 948467 28 100.0 33 ............................ TTCGGGTCGCCTCACGAATTGGAGGTCTCTTGC 948406 28 100.0 33 ............................ TGAAACTCGGCAGGCCCGTACCGTTGTATCGCT 948345 28 100.0 33 ............................ CAGGCGGTCCACCCGCCCCAGGGCGGCGATCTG 948284 28 100.0 33 ............................ CAGCCAGGCGCCTGACCACCCGCCACGTCGTGC 948223 28 100.0 33 ............................ CCACTCGGGGTCCCAGACGCCGACCTTCTCAAG 948162 28 100.0 33 ............................ CCTGGATATCAAAGTCCGGGGGCACGGCATCAC 948101 28 100.0 33 ............................ GGAGACACCATGAACCGCGTCATCCGAGAATCC 948040 28 100.0 33 ............................ ATGGGCGGCACAAAAGACGTGACAATCAACCGC 947979 28 100.0 33 ............................ GTCGAAGACCGGGGAGGTTCGCATCAAGGTCAC 947918 28 100.0 33 ............................ CCGCTCCGCAGTCACTACAACTTGCAGGATGTC 947857 28 100.0 33 ............................ CCGCGTATACCGGTAACCGCATATCAACATACA 947796 28 100.0 33 ............................ TTCTGTGCGCTGTCATCCCCGCTATCGCAGAAG 947735 28 100.0 34 ............................ CCCCCCCGAAGAGACTGCGGTACTTCTCTGACAT 947673 28 100.0 33 ............................ GAGCGCGAAGCAGTCCGCAGAGGAGTCCGTGGA 947612 28 100.0 33 ............................ TCGAGCGAGCTCACGCTCGTGGTCGAGGCCGGG 947551 28 100.0 33 ............................ CTCCTCGCCGCCCAACTCCCCCAAGCCCTCCAG 947490 28 100.0 33 ............................ CTGGGTCCGGCGCGCCGTCGACGATGCACGCCG 947429 28 100.0 33 ............................ GACCGACGTGCGCGGCCTCTCCAGCAGCATCGT 947368 28 100.0 33 ............................ TGGCCACATTATTCCAAAAGTACGTCCATTTCA 947307 28 100.0 33 ............................ GGGTCGCCATGCAATCAAGGTAAGTGAGTTTCA 947246 28 100.0 33 ............................ GGGCTCGTCGAAGGGTCAGGGGTCGTCGTCGCA 947185 28 100.0 33 ............................ CGCCAGGCAACCGATCAGGAGGCTCATCATGAG 947124 28 96.4 33 ............C............... TGTAGAACGCACTGCGCGTCATCATCTCCAATC 947063 28 100.0 33 ............................ CAGGGGCCGCATATTGCCCGTGTAGAAAACGCC 947002 28 100.0 33 ............................ TCTAGTCCGCTACTGCGGAGAGAATCGTGGATT 946941 28 100.0 33 ............................ TCTAGTCCGCTACTGCGGAGAGAATCGTGGATT 946880 28 100.0 33 ............................ CTGCGGCAACCCCACGGACCTGGAAGCAATGAC 946819 28 100.0 33 ............................ AGGCGAACCCGACCCACGCGACCTCGTCGAGCG 946758 28 100.0 33 ............................ GGAGGGCATGATGAGCGACGTCATCACAGGGCG 946697 28 100.0 33 ............................ CAGTGGGGCAGACCACACCTCAGACGTCTGATG 946636 28 100.0 33 ............................ CGACGTCCTGGCCGCCGTGGCCACGGGCCAGGC 946575 28 100.0 33 ............................ CGCGCCGGCGATGACGAAGGTGTCGGTCCCATA 946514 28 100.0 33 ............................ CGCTTCCCACCGTGCGCCTCACCGTTGAAAACC 946453 28 100.0 33 ............................ TGCTGCGAAGATCCTCTACCGCACCCGAATGGA 946392 28 100.0 33 ............................ TCTATGGGACCCTCCGGGCAATTAATCCGGCCA 946331 28 100.0 33 ............................ CCTATGCCGGAAGCCCCTGAGTTCAACCTCGAC 946270 28 100.0 33 ............................ CTCGTAGTGGATGAAATAGATTCCTGGCGACCC 946209 28 100.0 33 ............................ CGAAGTCTGCCGTGCCCCGGATAGGACCGAGCC 946148 28 100.0 33 ............................ TACGTCCCCCTCCAAACCGCCTTTCATCTGGCC 946087 28 100.0 33 ............................ CCGCCCCGTGCCGTGAGAGGCACGGGGCGGCTC 946026 28 100.0 33 ............................ GACCTACCGCAGCACCCCGGCCATCCTGACCAT 945965 28 100.0 33 ............................ CGAGGACGGGATGAAGTTCAGCCCTGACGACTC 945904 28 96.4 0 ................T........... | ========== ====== ====== ====== ============================ ================================== ================== 79 28 99.9 33 GTGCACCCCGCGTATGCGGGGATGATCC # Left flank : CGTCTCCGGCGGAGCGAACTACGCCGCGATCGAAGCAGAGGAGGCAGGTAGATGGTAGTCCTGGTCCTCACCGCCGCTCCCGCACAATTGCGCGGCTCGCTCACGCGTTGGCTGATGGAGGTCTCTCCCGGAGTGTTCGTCGGGCATCTCGCCGCCCGGGTGCGCGAGCAACTATGGGATCTGGTCAGGGCTTATATCGGGGATGGCCGCGCGCTCCTTATTTGGTCCACGAGGTCGGAGCAACATTTCTCTGTGGCCTCGCTCGGCCACGACCGGGAACCTGTGGACATCGAGGGCTGCCTGGTGATGCGGACTCCGTATCGGGCGATCGAAGGGTCGCAGGCGATCCCCGGGGTTGTGAGGCCGGCGAAGGAGTCCTGGTCCGTCGCCGCTCGTCGACGCCGCTACAGGAACTCGGCGGAACGGGCTCTAGGTAGGGAGTGAAGGCAGAAGGTTTCAGATAGGTTACGATGCTGTTGGGATCCCAAGGATCACCAAGT # Right flank : CGTCGGCAACCGTATCAAGAAGCTCCTCACCCCATACATCTCGCGTATGAAGAGATACGGGGAAGATCCCTGACCGACGCGAGCGCTACCGATGCCGACGTCGCATATCTTGTACATACGGAGATGACCCCAACGACTTATCGAAGCCGGCCTTATCGATGGCACACCTCTCGCATATGCGAAGACAACCTGCGTCACAATGAGTTATGGAACCAGCCCCACAGACACGCTCCAGACCAATAGGGGAATCCCATAAGTCAATCTATCCTTGATTGCTTAATGAGATTCCAGACAAGCCTAGTGGTCCACATAATAAACTATCCATATCAAAGAGTCATTAATTCATATCTACACATCAAGGAAATAGCACACTATAACATATCGTCGAAGCCATTCAATCCAGATAAATGAAGATCGATGACAAAAAGATAAACCATAAGCAGCGTACCACCAAAGGATATATCTATCGATCTCCATGACCTGTATGTGGAGCAAGGACG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACCCCGCGTATGCGGGGATGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGAATGCGGGGATGATCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //