Array 1 75735-79554 **** Predicted by CRISPRDetect 2.4 *** >NZ_POXE01000001.1 Neisseria weaveri strain C2009028987 C2009028987_S26_ctg_1957, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 75735 32 100.0 35 ................................ AAGCCCAAACGAATTGTTGTTATTGTTTGGCTTAT 75802 32 100.0 34 ................................ AGCTTAGACCGCAAAAGCAGCAGAAGCAACAGGC 75868 32 100.0 36 ................................ ATAAACCGCAGGCGGTTGTGCTCCTAAAAATCCCAC 75936 32 100.0 37 ................................ ATAAACTTGCCAAACTCGCCTGAAATGCTTACAAAAC 76005 32 100.0 34 ................................ GCCAGCGCGGCATGATTTTTGCCGTCAAATTTAC 76071 32 100.0 36 ................................ CAAAATCACGCGGATGCTGCCCGCGCATCTCCAAAT 76139 32 100.0 35 ................................ ATGCGGGCGTTGTCACATTGCTTGCAGATATTGCG 76206 32 100.0 35 ................................ AACATCAACCATAAATTGCAGGCCGTGCAACAAAC 76273 32 100.0 34 ................................ TACACAGGCGACAGGATACGGCATAGTCTTGATT 76339 32 100.0 34 ................................ TACCGAACTTGGCGAAGCGGTAGAAAAGGCGCAG 76405 32 100.0 34 ................................ AAATAACACCTATCCCCCCTCAAACCAACAGATA 76471 32 100.0 34 ................................ AGAATCAGGCCACTGGTATCCTGGCGATGCAATG 76537 32 100.0 34 ................................ TTACGGCGGCTCTTTGCCTGAAAATGTAAAGGTT 76603 32 100.0 36 ................................ TAGGTATGGCTCAACGGCGATAACCCAGTTTTGCAG 76671 32 100.0 35 ................................ GCCGCCATTGCAGCCCGTAATTACGCAAGCGCAAA 76738 32 100.0 35 ................................ ATCAACACGGCTGTAATGAGTTGACCCCACATAAT 76805 32 100.0 34 ................................ TGCTGGCCGAAATACCAACCATCAGCATGCTTTG 76871 32 100.0 34 ................................ CCATTTTTGAACGGTACGGTGTTGCAGAAAAACC 76937 32 100.0 34 ................................ TCGGTCTTAATTGCAGTTCTAGCCGAACCCAATT 77003 32 100.0 35 ................................ TTCGTTATCCGTATCGTCTAAGTCAATAAACAAAA 77070 32 100.0 34 ................................ GGTTATGGGTTTAACTGCTGCTGTTGCATTTGAA 77136 32 100.0 33 ................................ GTAAATAGGTTTTCCGTTTTTTAACGCTTCTGT 77201 32 100.0 33 ................................ GTATTATATGCAAAACAAACACGTGTATATGAT 77266 32 100.0 34 ................................ TTTTTGGAAAAAGCACCCAAAAAAAAACCCCGCC 77332 32 100.0 35 ................................ TACAAGCTCGCTCACAGTCTTAGACATGGGTACGC 77399 32 100.0 35 ................................ TTTTGCCGGCGGTTGCCATGCTTTTAATTTATGGT 77466 32 100.0 34 ................................ CAGCTTGATGATTCAACTCCTGTTACTGCGGCAG 77532 32 100.0 34 ................................ TTGAATATAGGGCGGAACAGGGCGACCGGCAGCG 77598 32 100.0 35 ................................ CCGTATATCAGCAATGATTAACAGGGAAGACGATT 77665 32 100.0 35 ................................ TGCCACCAATTCTTTGAAGCCCTCATCGCGCACCC 77732 32 100.0 33 ................................ ACAGCATTGATACCCTGTTGCCCGATGGCGACC 77797 32 100.0 36 ................................ TTTAAATATAAACAGACACCCTGATTAAATCAGGGT 77865 32 100.0 34 ................................ AATGGGGAATACACTCCTGAGCGTGCAAAAGCGG 77931 32 100.0 34 ................................ CTGCAATTTCCCCTGAATGGAATTTATACTCAAG 77997 32 100.0 36 ................................ AAGCGGCCTGCGTCGCGGGCATCAATGGCCGTCTGA 78065 32 100.0 36 ................................ GGATCGGTCAGATTGTTGGCAACAAACGGGTCGAAC 78133 32 100.0 34 ................................ TTGCGCCATATAAGCCTTAGTCATGCTCCGGCAC 78199 32 100.0 34 ................................ GCCTATGCCTGTGATGGTCTTTAATCGTTTACGC 78265 32 100.0 35 ................................ CGGGTTCACAGGCTGCGCCGGTACCCAAGCCAAGA 78332 32 100.0 34 ................................ GGGATATGATGTAGCCATTTCAAAGCTTCATGCC 78398 32 96.9 34 ...........T.................... CCAACAGTTTAAGCAAAAAATACAAAGAAATTAA 78464 32 100.0 34 ................................ AAAAGATATAGATGATGCTTGTAAGCAGCTTTAT 78530 32 100.0 34 ................................ GTCGCTACTCCAACCTATATCGCGTAAGAAGTTC 78596 32 100.0 35 ................................ GTCTTCAAAAAGCTTATCAACTTGACTTGAAGTAA 78663 32 100.0 35 ................................ TGCTTACCCAGCATCCGCGCCTAATACACGCTAAC 78730 32 100.0 34 ................................ TATCCAATGTATAGACGCTTTTTACACCATTCGC 78796 32 100.0 34 ................................ CATGGACGCGTCTTGGCTTGGGTACCGGCTCAGC 78862 32 100.0 35 ................................ AGACAGCTTCAGCAAACCAATCCCGCCACGCTCAC 78929 32 100.0 34 ................................ TACGTTTTACCCAAATGCCCCAACAATCCGCTGA 78995 32 100.0 34 ................................ CGCCAAGGGAAATACGCGGCGGCTGGTCAAAATG 79061 32 100.0 33 ................................ AAGTAATCAAGTAAGTTGCAAAAAATAAAAAAG 79126 32 100.0 34 ................................ TCCACCACTTTACGGGAAACGAAATGATAAGGAA 79192 32 100.0 34 ................................ TGCTTAAGCTACTTATTGTCCGCATTATTATTGC 79258 32 93.8 33 A...T........................... GCAATACAAAATCATACCCACAATAGCTCCTTT 79323 32 96.9 35 C............................... ATACGCGTTCACACGGCCGTTTTTAGGTGCGTTAA 79390 32 96.9 33 G............................... GTCAAAAACAGCTTGACCGTTTTCAAACTTAGA 79455 32 96.9 36 C............................... CAGCGGAGCCTTACTGTTGGCGGCTAGCCTTGTCAA 79523 32 96.9 0 G............................... | ========== ====== ====== ====== ================================ ===================================== ================== 58 32 99.6 34 TCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC # Left flank : ATAAAGGGGAAATAGTGTGTTGATGTTGATTACTTATGATATTTCGCTGGAAGATGCGACAGGGCAGGCAAGATTGCGACGCATCGCCAAGCATTGCTTGGATTACGGCGTGCGCGTGCAATATTCGGTATTCGAGTGCGACGTTACGCCGGATCAGTGGGTAAAGCTGAAGGCCAAGCTGCTGGATACTTACCAGCCCGAAACCGACAGCCTGCGCTTTTACCATCTGGGTAGTAAATGGCGGCGAAAGGTGGAACACCACGGTGCGAAGGCGGCGGTGGACGTGTTTCAGGATACGCTGATCGTGTGAATCGCTAACCCGTGGTTCTCATGAAAATGCGGGGTGGTTGGCGATGTAGGATTGTTCTTTAACAATCAGGAAATTAGCAAAGTGGGTGTGGCGGAATAAGGCTGTGTTATACTCGCTTTTCGCGTTTTCGGAGAGTTTTAGCGAATCAGGGCCGTGCAAGCCTTGATGGATAAAGGTTTCTGAGAAGGCT # Right flank : CACAACGGCAGCGAAATGATGAATTGGGTAGTCGGCCAGCCGCCTTCTGTAACATCGCGCGCGTTTTGTCACCATTTAGCGATTTTTTTGTCACCATCCGACAAACAAACTGGTGACAAAAAATCCGCTAAAACAAACCCCGTTTAAAGATAGGTTAAACGGGGTTTTTAAACGCCTAAAGTTTGTACACCAGATTATCCTCGTATGAGGCATATTTGCTGACCTTAGCCTGCACGGTTAGCCGGGTAGAGTGATCAAATACATGCCAATTATCCAGCTGCATAGACACGACCGCATCAATATAGTCGATAAACTCCGACCGCGTAGAGCTGAAAAACAGATATGGCGGGCGTACAAGATTGACAAGTTTGAGGTAATCAACCAAGCCGAAGCGGCCGTCTTGAGCATAAGCCGCTTGTGTAGTGGATAAATAGGGCGGATCAAGCACCAACAATGCTTGCGGGTCGTCGGAAAACTGCGGAATCAACGTCTCGTAAGAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.80,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //