Array 1 573698-579817 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM001148.1 Parascardovia denticolens DSM 10105 = JCM 12538 strain DSM 10105 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 573698 33 100.0 35 ................................. AAATCATAAACCGGCTCACATACAACAAGGTCAAA 573766 33 100.0 35 ................................. TTGAAGACATTGCGATGAACATTCCCCCCGTCCCT 573834 33 100.0 33 ................................. ATCGACGAAATACTCAGGTTTGTACTCATCCTG 573900 33 100.0 34 ................................. AACTGATTGGATTACCAGTCCTATCATTGAAGTG 573967 33 100.0 33 ................................. ATGATTATTCACCTTCAATCGGTTTTATCAGCG 574033 33 100.0 34 ................................. TCGTAGAATGCGAAAAGCTGCATGACAATGTTAT 574100 33 100.0 34 ................................. TTGTGTTATCGTATATGATTGAGCTGGGGCAGCC 574167 33 100.0 34 ................................. ATGACCGGATAGGAGGAAATGAAACGCCTTTGAA 574234 33 100.0 34 ................................. AACAACCCGTATTTTTATAAGATAGGTTTGAAGA 574301 33 100.0 35 ................................. CTCCTGATTCTCATCGTCCTTCACGTTGTTTTCAT 574369 33 100.0 34 ................................. ACGACCCGGTGCGGGGCTTTTATCCCGCCCGGCG 574436 33 100.0 33 ................................. AACTCAAATACATTATCCATGCCGAGGAACTCA 574502 33 100.0 34 ................................. CCACACATTGCCGGGCCATTGGATCGCATAACCT 574569 33 100.0 35 ................................. AGCACGGCGGTCTGCTTGCCGATGGCCTCCTGCAA 574637 33 100.0 32 ................................. TCAACCCGGTAAACCTTCCCCACCGTGGACGG 574702 33 100.0 34 ................................. AGCACGGGCGACGGGTTCGGCTTCGCCGGAAGCG 574769 33 100.0 34 ................................. CCGTGCTATGGGACCAACTTGGACTGCTACTGCG 574836 33 100.0 34 ................................. TGCGACTTTGTCGACGTCGCCGACTGGCTTGACG 574903 33 100.0 33 ................................. TTCTGAGCGTGTCTCTTTCCGGGGTCGGCCCAG 574969 33 100.0 35 ................................. CGCGACTTTGTCGACGTCGCCGACTGGCTTGACGG 575037 33 100.0 33 ................................. ACCCCGGTAGAAGCACGAACCATTTTTGGAACT 575103 33 100.0 34 ................................. CAAGTCTCCAACCTTGTTTTATCAGACACGGTAA 575170 33 100.0 34 ................................. ACCACCAGCCAGCAGACGCCCATCCGGCAGGCCC 575237 33 100.0 34 ................................. TTTATCACCATCCTTACCAAGCTGATACTGATGC 575304 33 100.0 33 ................................. GAGCTGCTGGATGAGTGGCCGGAATCCACGATG 575370 33 100.0 34 ................................. CGTCTGTTGACCGGCATGAGACAAGGGGAGATCC 575437 33 100.0 35 ................................. GCCGAGACTTGGTGACCGGCCCCTGGTCGGTCTGG 575505 33 100.0 34 ................................. CACACGACATTATCCAAAAAATCTGTCAAAGGAC 575572 33 100.0 34 ................................. CGTCTCGCTACGCATGGGGCCATATGCGAGAAAA 575639 33 100.0 33 ................................. GTCCTGTCAAGAACGAGACTGTCCTGATCCAAG 575705 33 100.0 33 ................................. AACGGCGAGTAACGGGCAACCCGCATGACCATG 575771 33 100.0 34 ................................. GCCGAGACTTGGTGACCGGCCCCGCCAAACCCCA 575838 33 100.0 33 ................................. ACGTCATCCCATCGGTCGAGATCCCACACATCG 575904 33 100.0 34 ................................. CTGTAAACGCATCTTAACCTCCTTGATACCTCAA 575971 33 100.0 34 ................................. GGGACAAGGATGACGCCCAGGAGCGTGCTCAGGT 576038 33 100.0 34 ................................. AGACCGTTGATGTCGATTTTTTCCGGCTCCACCT 576105 33 100.0 34 ................................. TGTATGTTTGGCCCCTATGCATACTTTTGATGTT 576172 33 100.0 34 ................................. AGAACAAATATACCGCATATTTATTCCGCATCCA 576239 33 100.0 34 ................................. ATCCCCGGCATCGCATACTTTTTAAAACTGTGCA 576306 33 100.0 34 ................................. TCTCCCGCTCTCAAGGCAAACAGAGTGGAACGGT 576373 33 100.0 35 ................................. AAAGTCCGACCTACATAAAAGACAAACTGCCACGG 576441 33 100.0 33 ................................. TGAGGTGTAGGTCATAAAAATCCACCGATTGAG 576507 33 100.0 35 ................................. GACGGAAGAGAAAGGGGAGCGGCTCATCACGGACG 576575 33 100.0 34 ................................. AGCTCCCTATTATACACGAGGGGCAGGCTTTTCG 576642 33 100.0 34 ................................. CAATATCCTTCTTTTCCGGCCCTCTTGAGCAGGG 576709 33 100.0 34 ................................. ACATCCCTCAATGGATTGCTCCGGATAGCCGGTG 576776 33 100.0 34 ................................. AGCGTGAATATTGATACTGTCCTCGTTGTTATCA 576843 33 100.0 33 ................................. CCCACTCGCCGGGCTCTCTATCGCAACTTTTTA 576909 33 100.0 34 ................................. CCCGACGACGAGGCGACCGGGCCGACGCGGCGAA 576976 33 100.0 33 ................................. GACCATTACGGACCATAGTCGCCAGGCTGATGG 577042 33 100.0 34 ................................. GGTAAAAACTAACCAGAAAGGACACCTACCATGG 577109 33 100.0 35 ................................. CTTGCTTGGCCAACCAGGCCTCCAGGTCGGCGATG 577177 33 100.0 34 ................................. GTCGAGGTCCCATGCTTTGTCGCCTATCATACGT 577244 33 100.0 34 ................................. TGCCATCCTCCTTAGTAGCTTATCTGATCATATC 577311 33 100.0 34 ................................. ATGACACCCACCGGCCGCATCCTCGTCATCAACA 577378 33 100.0 33 ................................. GGTACATGCTTAATAATCTAAGTTACATTTGCG 577444 33 100.0 34 ................................. AGAATAAATATACCGCATATTTATTCCGCATCCA 577511 33 100.0 33 ................................. TGGCTGACGGCACGCCCGTTCTCTGCCATGATG 577577 33 100.0 33 ................................. AACGGTTCGTCCTGCATTTCACGGAAACGGAGT 577643 33 100.0 33 ................................. TATGGTAATAAGGATGATTGGAAGACGCTCTTC 577709 33 100.0 32 ................................. ACACCCCTTAATGGATTGCTCCGGATAGCCGG 577774 33 100.0 34 ................................. TGGACCGGGGAGGGGAGCAAGCTCACCTTGATTG 577841 33 100.0 33 ................................. CCTTCGCTGGTGGAGTCGTCGACATCCGTCTTG 577907 33 100.0 33 ................................. CGCGAAAAGGTCATCGCTGACTTGGAATCCTGG 577973 33 100.0 34 ................................. AGAAATGTAACATATGCTACACAGAATGGCGTGA 578040 33 100.0 35 ................................. ACCCGGCGCACCTTCCTGCCGCAGGACGGGCAGTA 578108 33 100.0 33 ................................. AATCCCCGGAGGCGGGTCTCGTCAATCCTCCGC 578174 33 100.0 34 ................................. GTCTCGCGTAGTCGACGCTGTGGTTGCTTTTGAG 578241 33 100.0 33 ................................. TTGACCAGAAGCCTGGTCTTGGCGTCGACGTTA 578307 33 100.0 33 ................................. GCCCACTGGTCGCAGGTCAGCTCCAGCCTGTCT 578373 33 100.0 35 ................................. ATCCAAGCCAAACTGATAAATCGGTTATCCGGAGT 578441 33 100.0 36 ................................. TTGAGAAGCAACGCCACGGCGTACGGCAATGCGCTG 578510 33 100.0 35 ................................. GCCAACCACCTCGGCGTCAACAAGAACAGCGTGTG 578578 33 100.0 33 ................................. TCCGCTGTCCCCGCCGCCGGGTTGGAGTCGGAG 578644 33 100.0 35 ................................. AGATTGAAGGTCGCCGTATTCCCATACGGGCGCAC 578712 33 100.0 34 ................................. GAGGTGGCTGTCTGCGAGGCCGAGGTGGGTGACG 578779 33 100.0 35 ................................. GACGGGAACAGCCTCAACAGCGTGAACCCCGACGG 578847 33 100.0 35 ................................. CGATACTCGCAGTAGCACCGGTGCTCCCTGTCGAT 578915 33 100.0 34 ................................. TGATTGATTGATAGTTCTATTATAACACTATCCC 578982 33 100.0 34 ................................. CTTGACCGGCCGTCACGCGGAGGTGAAGTTCCCT 579049 33 100.0 35 ................................. CTCGACATCCTCACCTGGATGAAAGCACCCCGCCA 579117 33 100.0 34 ................................. CCTTTGGGAAGGAACATCAAGGATGGGAGCCTGA 579184 33 100.0 33 ................................. AAGTCCTGGTCGTTTTTACTTTTCACGTCGCCG 579250 33 100.0 34 ................................. TGTGTTCACAGCACCGGAAACGTCGGCCCACCCG 579317 33 100.0 34 ................................. CTCATCGACTACTGCCGGAACCTGAAGCCCCTCT 579384 33 100.0 34 ................................. ACCCACACGCTCCACACGTACGTGTCGGCCGCCA 579451 33 100.0 34 ................................. AACCCCGCCACCAGACGGTTCAGCCGGCCCACCG 579518 33 100.0 34 ................................. GGATTCCTGATATGGTTTTTCGCCGTCAGATAGG 579585 33 100.0 34 ................................. ACTCCAACTTTTGAAAGGAAGTCGAAGATGTCTG 579652 33 100.0 34 ................................. AACGCCGACAAGCGCACCCCCATCCTCGCTACGG 579719 33 100.0 33 ................................. ACCTTGCCGGGGTCGGTGTAATGCTCCTGGAGG 579785 33 93.9 0 .............................G..C | ========== ====== ====== ====== ================================= ==================================== ================== 92 33 99.9 34 GTCGCTCCCCGCAAGGGGAGCGTGGATTGAAAT # Left flank : TACGATGGAGGTTGCAGGGCAAAGGCGATTACGTAGGGTCGCGAAGGTGTGCTCAAAATTTGGTCAAAGAGTACAAAACAGCGTTTTCGAATGTGAAGTGACTCCTGCGGATTATCTTTTGCTTAAACACGATTTGTTCGAAATCATGGATGAGGAAGTGGATAGTTTAAGGTTTTATAATCTTGGGAGTAAATACTCGAATAAAATAGAATACCGAGGTGTTCAACGGCACATACCGGTGGATGGCATTATGATGATCTAAGGTTTCGGGACCAGATGGGAAGCGAAACATTACGGTTGTGCGGAGGTGAAGCTGTCATAGAAATCCTGGGATCTTCGCACCAAGTTTTAATATGAGCTAAATGGTTTTTAGTAATTGCGCCTTATTTGTCTTAGACATTTTATGACAAAAGCGTCAATTCTCTGCCTCTTATAGGTAGAATAAAGGAATAGAGATGGATTCGTGTCTTGATTTCTGAGATTATTTGTCCATTTCTGCG # Right flank : CCTGATGCTGATGACTATGTGGCTAGTGTCATGATGGATTTTTTCACAATGGATAGATTAAAAATGTCAGTCCTCCAGTGATTGATCGTTTCTGCTGGGTACGATTCTGATTCGCATAAATCATGTCAAGGGGTCTTATCCTAATTCAGCAGATAGATTGGAGCTTATCTGAAGGCTTACTGTTGGCTTACGAGCAGTTTCGGTGAATCTGCATAGAAACCAGACGTTCTCTTTTATACTCTTCTGCATTTTTTTACAGTGCTGGTAAGAGATGCGAGACTTGCACAACAGTTATGGTCGGGAAAGCTAGTCGGAGATGGTGCCGAGTCATGTCGTACGCTGAGAAATTCAGACAAAGATTAGCAGCTAGTAAGATTCAAAATAGGCACAGAGAAAATGGCATGGTGAACGAAATAATCAGCGTGTCAATCATCCAGTCCGTAGGACTCACTGGTGATATCTCACATTAACAGAAACGCTATCGACTTGTTGAATCAGCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCAAGGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCGCAAGGAGGGCGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.30,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.15,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //