Array 1 2738575-2747079 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068162.1 Corynebacterium glucuronolyticum strain FDAARGOS_1111 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 2738575 28 100.0 33 ............................ CCCCACTTACTCGATGGGAGGCGCTCATACGAC 2738636 28 100.0 33 ............................ CCGTGAGCGTCCGGCCCTCATGGAGACTCCAGT 2738697 28 100.0 33 ............................ GCGACGACGGCAATGGATGGGATGGTCGATATG 2738758 28 100.0 33 ............................ GTCGACGGCGAAGAAAACGGGGTGACCAGCAGC 2738819 28 100.0 33 ............................ CAAACAAACTCGCTAAGAAACTGTTTGCCGAAA 2738880 28 100.0 33 ............................ CAGCTAGAGGAGCTCACCTACGACGGGTACCTC 2738941 28 100.0 33 ............................ CTCTCGAGAAATGTAAGCATGATAACCGTCATA 2739002 28 100.0 33 ............................ CTTACACCCCCAGCATTGGTGCCGTTAGCAGCA 2739063 28 100.0 33 ............................ CCAGGTTCTGTAGTACTCGGGAGTGGTCATAAA 2739124 28 100.0 33 ............................ GATTGAGCTTGGTAAGAAGGCCATGAGACTCCC 2739185 28 100.0 33 ............................ CCTCGACGGGCGACACACCTGGTACCGCGACGG 2739246 28 100.0 33 ............................ CCGGCACCAATCATTCGCGATGCTCCATTCCCA 2739307 28 100.0 33 ............................ CGATATTCGGTGTCATCCTTCCGATTCTGTGTC 2739368 28 100.0 33 ............................ TCTCGGGGATGTGCATTCCAACCCTGGCGGGGT 2739429 28 100.0 33 ............................ CTCAACACCATGCAGGAAAACCTCCTGAGCCTC 2739490 28 100.0 33 ............................ CGACCGCGAAACCGCGCTACTCATCGCCATTCT 2739551 28 100.0 33 ............................ CCACAGAACTGTATCACTTCCGCCTACTCGTAC 2739612 28 100.0 33 ............................ GTGATGAACACCAAACAACATTTTGTCACCATC 2739673 28 100.0 33 ............................ GGAAGAATATTCCCATGTCAGGAATCGAAATCA 2739734 28 100.0 33 ............................ CGTAATCACCTGTGGCTAACTCGGTGACAACAA 2739795 28 100.0 33 ............................ CAGACTGCAGCGACGGCATTCGCTCAGTCACGA 2739856 28 100.0 33 ............................ CATCTAACAACAAACACGGGTGGGGAGCGCATA 2739917 28 100.0 33 ............................ TTCAGGTTGCGGAGGCGCGCGGTTTTGAGGTCA 2739978 28 100.0 32 ............................ CAAACCAGTGATGGATAAAACCAACCAAAAAA 2740038 28 100.0 33 ............................ CCGGGGGTGAACAATGCGGGAACGAACCAAAAC 2740099 28 100.0 33 ............................ TGTGATCATGACCACCGTTGCCCTTCCCGTGCC 2740160 28 100.0 33 ............................ GCATTGCAACTGAAAGGAAAAGGGAAACCAAAA 2740221 28 100.0 33 ............................ GGCTGAGGCTGATTCCCGTGGTGGTGCCGGTGG 2740282 28 100.0 33 ............................ CCTGTCGGTTGCTGCGACTTCTGCGCGATCCCC 2740343 28 100.0 33 ............................ GCGCAATGCTTCGCCGAGTTTGATGGGGGCGAG 2740404 28 100.0 33 ............................ GACTTCTGGGACATCGTCGAAAGCGCTGAAATC 2740465 28 100.0 33 ............................ GCCTTAAAAGGGTTGGCGATGGTGTCCTCGTCA 2740526 28 100.0 33 ............................ CAGGGGTCAGATCGGCGGTGTAGGCGATCATTC 2740587 28 100.0 33 ............................ CCGTGGAGGCGGATTGTTTGGTCGGCGGGGAGC 2740648 28 96.4 33 ...................A........ CCCCGCACACAAGAAGCCGCAGGGGCAGGTCAC 2740709 28 100.0 33 ............................ GGTTTTTCAACACCAGGCGGGGCAGGTTTTTGG 2740770 28 100.0 33 ............................ CTGGCCGTCGGCGGACGCATCGACGGTGCCGCC 2740831 28 100.0 33 ............................ CAAACGCTTCGATCCGGTCACCCAGGTCTTTTC 2740892 28 100.0 33 ............................ CACGCCGGGCAACACGACTGGATCGCCAAAATC 2740953 28 100.0 33 ............................ CACTGTGGGATTCTTTTTCCTACCGAACATTTA 2741014 28 100.0 33 ............................ GAAGGAATCGTAAACAATTTCGTCTACCGGCTG 2741075 28 100.0 33 ............................ TTTCAGCTCAGCGGACTCAATCGCCTTCGCCTT 2741136 28 100.0 33 ............................ CTCGAACGTCGCGGATACACCGTCCCAGGCATC 2741197 28 100.0 33 ............................ GTTTTCCGGCTCGCCCTCCAGCGCGTTGAAGTA 2741258 28 100.0 33 ............................ GACAACTAGGGCATAAATCGGCGGCGATGACGC 2741319 28 100.0 33 ............................ CCTCGCAAAGAAGCTCGATAAAGAGCTTGCCCG 2741380 28 100.0 33 ............................ CTCCGCATGCAAATGGACACCATGCGCGCTCTA 2741441 28 100.0 33 ............................ GAGATAACTCGCCAATTAATCGAGCACCTCGAC 2741502 28 100.0 31 ............................ CACTTGGCAACCCGACAGCAACGGTATCCCA 2741561 28 100.0 33 ............................ CTTCACTCACCCCCTGCTGTGCCATGCGTACAA 2741622 28 100.0 33 ............................ CTCGCTAGTGCAACTGGTGCGATTTTCGGGGTT 2741683 28 100.0 33 ............................ GTGCCCGGCGCGCCTGCTCTTTCTCCTCATACG 2741744 28 100.0 33 ............................ TCAGAACCCGGAGGCCCTGTGATGATCGGCACC 2741805 28 100.0 33 ............................ CCTCCGTGTAATCCACGGAGGCACCATTCGTCA 2741866 28 100.0 33 ............................ CAATCCATACGGCGCGTCCACTACGGGGCGCGC 2741927 28 100.0 33 ............................ CCGAGTTTTCCCGGAGGGGGTGCTGGCCCGGCA 2741988 28 100.0 33 ............................ TCCTGCGCGTGGCCTTGATCTGCCTCGTAAACC 2742049 28 100.0 33 ............................ CTGAACGGTTGCGTAGGTTTTGTTGCAGTACAG 2742110 28 96.4 33 .............A.............. CGGTAAGATTTACAGCCCCTCCGGGTGAGCGTT 2742171 28 100.0 33 ............................ GCCCGGCCAATGGCAGCGACGCAAAGCCAACCT 2742232 28 100.0 33 ............................ CCGCCATATTTGGCCATATTTAACCTTATGTTC 2742293 28 100.0 33 ............................ TTACGCCATGTTGCTGGTGATGGCGCTTTTCTG 2742354 28 100.0 34 ............................ CGTGCTCACCGTTAGACAGCAGCGCCGGAATATC 2742416 28 100.0 33 ............................ CCATTGACCTCTGCCATGGCGATAGCCCGATCA 2742477 28 96.4 33 ............G............... CCATCCCATCCGCCCCGCCGGGGCATTATTTTA 2742538 28 100.0 33 ............................ CGAACACGCCCAAAAAATCGAAGCACGAAACCC 2742599 28 100.0 33 ............................ CCTCATCTGCGAACTCGCAGAACTCGCAGGCTT 2742660 28 100.0 33 ............................ CCCATCAAGCAGACCAAGGAAACCCCCGGCGAA 2742721 28 100.0 33 ............................ TACGACTATTCGGAAGATACTGGGGACGCCGTT 2742782 28 100.0 33 ............................ CCCTAGTGTCCTCCGGCGCGCGAGGGTTGACCA 2742843 28 100.0 33 ............................ GTAAAGAATTGGACACGGGTAAAGATTGGGTAA 2742904 28 100.0 33 ............................ CCTCCCTGCTGTGCTCACCTGCAACATCCGGTG 2742965 28 100.0 33 ............................ GAAATCAATGAGAATCCCCACGGGCAAGCACCC 2743026 28 100.0 33 ............................ CATAGTCGCCAGTTGGAACACCCGCATACGGGC 2743087 28 100.0 33 ............................ GTAGTCGAGCACCTCTTGGTGCGTAATTGTCCC 2743148 28 100.0 33 ............................ GCCCCCTACCTGAGACATTGATTCCCAGGAAGG 2743209 28 100.0 33 ............................ CTTGGCAAGTACCCTTAGATCGCCCGAGCGCGG 2743270 28 100.0 33 ............................ CTGTGGCTCAGTGCTGATGTCACCACCGAAATC 2743331 28 100.0 33 ............................ CCACGAGGACGGCGGAGTATCGCTTGGAGGTCA 2743392 28 100.0 33 ............................ CAGTGCAATCGTTGCGTGATCCGCATCTTTTGG 2743453 28 100.0 33 ............................ GCACCGAACTTCAGCCCGGTGTCAATGCCGTGC 2743514 28 100.0 33 ............................ CCCTCCGATGTAATCCCAGGTGCGCTCCGAATC 2743575 28 100.0 33 ............................ CCCCATGCAGGGTGATTTCCTGCAGCCGGTTCG 2743636 28 100.0 33 ............................ CCGGCTGTTTGCCGACATCGGTGGTTTCGCGTA 2743697 28 100.0 33 ............................ CTACCACAGCACATGACCGCTGATACGAAAAGC 2743758 28 100.0 33 ............................ TGAACATGGCGCACTACGCCGGTAATCTCTCTG 2743819 28 100.0 33 ............................ CTGAAGCAGCAGAATTCGCAGAGCAGCTAATGA 2743880 28 100.0 33 ............................ GCATCCGTGGCGCATTGTTTCTTTAAAGGGCAT 2743941 28 100.0 33 ............................ TCGGCCTTTCGCCTTCGCGACAATCGCATGACC 2744002 28 100.0 33 ............................ CTAAACCAACAGCGCAGAACCTGCGCAGCAACC 2744063 28 100.0 33 ............................ CCAGGCACGCCGCATACGCCGCAAAAGATCTCC 2744124 28 100.0 33 ............................ CAATACTGCGCACTGATCGGAAAACCGCTAGAA 2744185 28 100.0 33 ............................ CCTCACCAGCGGTTTCACCCCTTTTCACCCCCT 2744246 28 100.0 33 ............................ GGTTTCCGCCGCGTCGATGATCGTCTTGGGGTC 2744307 28 100.0 33 ............................ CCGCTAGAAGTGGATGACTATGACCATATTGTT 2744368 28 100.0 33 ............................ CCCCGGCTCGTGGTGTGGGAAAACGTGAGAGGA 2744429 28 100.0 33 ............................ CTTCATCTTTTTATGCCTCCTCGCCTTCGATAA 2744490 28 100.0 33 ............................ GTAAAATTTATCCAGGTGAACCTCGCGGGTGTC 2744551 28 100.0 33 ............................ TCACACATGCGGGAGGCGTTGTGACACCCACCA 2744612 28 100.0 33 ............................ CATGTACAGGGGTTTCGATGCCCACACGCTCTG 2744673 28 100.0 33 ............................ GTAATGGCACTACCGTACGTCACCATTGAGTCC 2744734 28 100.0 33 ............................ CGACGATGCAGATACCACTACTGAGCCTCACGC 2744795 28 100.0 33 ............................ CCGTGTGCCGTGCGTATCAGCCACCAGCCCAGC 2744856 28 96.4 33 .....G...................... CTCCTCGCAGATAAGCGGGATTTGTGGGGACTG 2744917 28 100.0 33 ............................ CTGAACGGTCGTGTAGGTTTTGTTGCAGTACAG 2744978 28 100.0 33 ............................ GTGCGGGCCGGTGGATTGCCCCTCGGAGCCGAC 2745039 28 100.0 33 ............................ CTTGGTCATGGCGGTGATGCCAAGCAGTTTCTT 2745100 28 100.0 33 ............................ CAAACGCTTCGATCCGGTCGCCCAGGTCTTTTC 2745161 28 100.0 33 ............................ CCTTTCTTCTTTCGGGACACACTTTTAGCCGCC 2745222 28 100.0 33 ............................ GAAAGCTCCGATGTCTTTAGCATCGGAGATGAA 2745283 28 100.0 33 ............................ CTCCCGTGTACGTAACACTTACCCCCGGTTTAA 2745344 28 100.0 33 ............................ TGCCTGCTCAGGAATTGTGCTCATCGTGGAGTA 2745405 28 100.0 33 ............................ CTTCGCGAGTCTGGGGCGGCTACGGCCGAGGAG 2745466 28 100.0 33 ............................ CTGGATTTCTGAGAAGAAGGAAGCTATTCGGAA 2745527 28 100.0 33 ............................ GATCATCGCTGATCAGGAATTCTCCCCATCTTC 2745588 28 100.0 33 ............................ CCGGCGACCCATGCGGTGCTGCAATATCAATTC 2745649 28 100.0 33 ............................ CGGGACCGAGGTCACCGAAGCCACGACCAGCGA 2745710 28 100.0 33 ............................ TCTGGGCGAGCACGGCATCCCTGAAACACGCCT 2745771 28 100.0 33 ............................ CCCAATGACATCGCACACTCTCTACCTCGGTGA 2745832 28 100.0 33 ............................ CTCCACTTACTCGATGGGAGGCGCTCATACGAC 2745893 28 100.0 33 ............................ GTGCGGGCCGGTGGATTGCCCCTCGGAGCCGAC 2745954 28 100.0 33 ............................ CGAGTAGACCCGCGTATTCGCGGTTAATTTCCT 2746015 28 100.0 33 ............................ CGAGCCGAGAATCCACCTTGATTTCAGGAAGCT 2746076 28 100.0 33 ............................ CTCCCACACGGCAAGCCGTCGACCAGACCGAGG 2746137 28 100.0 33 ............................ CAGCACGCGCGGCCGTCGCATCCCGCTGCCGTC 2746198 28 100.0 33 ............................ CGACCGCCCTAACGCCCGGCTTATACTCGCCTT 2746259 28 100.0 33 ............................ GGTAGTTTTTCGCGCTTACCCACCCGCGCTCCA 2746320 28 100.0 34 ............................ TCGGTACGTGCCATAGTTGGTCACCAGATAGATG 2746382 28 100.0 33 ............................ CGCGCATCTGTGTCGGATTCGACGGCTCGGAGA 2746443 28 100.0 33 ............................ CAGGCACGATCACCGGTTAGTTAACCCAGGGTG 2746504 28 96.4 33 .....A...................... CGGGACGGGGGCGGGGATAGCCCCCTCTTTTAC 2746565 28 100.0 33 ............................ AAAGATGGCTCGAGCGGGCACGGTGTGCTGTGA 2746626 28 100.0 33 ............................ CACGAAACTCGCTGTCACCCTGCTCAAAGGCGA 2746687 28 100.0 33 ............................ CCACTGCGATTTGCAGCGTGGGGGATATTTGGG 2746748 28 100.0 33 ............................ GGACCCCCGGGCGACGGCCCGCTGGCAGCTAGA 2746809 28 100.0 33 ............................ CTGGAGAATGTCAGGGAGCCTATCCCCGAGCGG 2746870 28 96.4 33 ........................G... TTATCGGCACCGTCACCTGTCAAAAGGGCGGTG 2746931 28 100.0 32 ............................ GGAAATTCGCATGTCAAATGAAGTAGAGGTAG 2746991 28 100.0 33 ............................ CTGCGTTACCGTTGAACTGACTATCATGCTTCA 2747052 28 96.4 0 ...........................A | ========== ====== ====== ====== ============================ ================================== ================== 140 28 99.8 33 ATCTGCCCCGCACCTGCGGGGATGAGCC # Left flank : CGTCCTCGTCACCACACCACTGCCCTACAACGAGTTCTGCGCCCTCATGAACCGCGCCAAACTCGTCGTCACCGACTCCGGCGGCGTGCAGGAGGAGGCCCCAGCACTGGGCAAACCAGTCCTCGTCATGCGCGACACGACCGAGCGCCCCGAGGCCGTCAGCTACGGCACCGTCAAGCTCGTCGGCACCAACGAAGACGACATCGTCAACGAGGCGACGACGCTGCTCACCGATGACACCGCCTACGCCGCCATGGCCAATGCCGTCAACCCCTACGGCGATGGCGACGCCGTCCCCCGCGTCCTCGCCGCCATGGCGCAGCTCGCCGGCGTGGGAGAGAGGTTGGAGGATTTTCGGCCGTAGGGGTGGGCCACCGGGTGGGGCGGTGCCCCAGCTCCGACCCCTCCCACGCTCAAGCCGACTCCGGCCTCCTCTTGCCCCCGATTTCAAGTTAAAGGTAAAATAGCCCCAGGCTCCATATCCTGCCTGTTCAGGAAGC # Right flank : ACACATTGCTATCTAGCTCCACTCCCCTCGCCATAAACTGGCCTGAATCAGCTTCGATTCGACCGGCCAGGGGCTTAGTGTTAGGTGTTTCCGGTTTATCACCTCAATATGTCCTGGGACTCAGAATTATCTAGTTCGGTTAGCTCGGTGGCAAAGAAAAGTCGGCAATTTTCGAAATTCTCATTAACCGTGTGCACTCGCATTTTATGATGACAATTATGTCAAGGTTTAGCTCGGCATCCGAGAAAGTGCTCGCCAGTTTTGAGCCACAAATCCGTTCATTTTGGGCTAAGACTCCGGAAGACTCCACGGATAAGAGTGGAGATTTCTTGTCGGTACCCCAGCATCTTGTCGATGCCGCGTGCGTCGCCGATGAGCTTTGGGAGACGTGGCTAAGTAATCAAACAAAAACGTTTCTTCGTCAGGAAACTTCAATGACTGAGCCGGCGCTGCGTAGCCTGGCCACTTTTGTCGTCGGGACGCATGACATCGGGAAAATA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTGCCCCGCACCTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTGCCCCGCGCGAGCGGGGATGAGCC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2756596-2759673 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068162.1 Corynebacterium glucuronolyticum strain FDAARGOS_1111 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2756596 28 100.0 33 ............................ CACCGGGCTACGTGGCCTGAAAGCGCAAATAGA 2756657 28 100.0 33 ............................ CAGCATGGATCAGTCTGACTATTTTCCTGGCAA 2756718 28 100.0 33 ............................ TGAGGCGAGCGCCGAGGTGTGCGTCCTCGTCCT 2756779 28 100.0 33 ............................ GCCTCGGATCATGGGATGTGCTGCCCGCTGCCA 2756840 28 100.0 33 ............................ CGAGACGCTCGAGCTCCGTTGCCGGCAAAAGCC 2756901 28 100.0 33 ............................ GCACGTGAGGAATACCTAGCAAAGCACCCGTTC 2756962 28 100.0 33 ............................ CAACCTCCTAGCCGACGGGCTGTTGTCTGGGAA 2757023 28 100.0 33 ............................ CCACTCTTTGCGGACTCGAACTGTATGAAGGAA 2757084 28 100.0 33 ............................ GGAAATCTCCATGATCCAACGCACTGAGAGAGG 2757145 28 100.0 33 ............................ CATGTACAGGGGTTTCGATGCCCACACGCTCTG 2757206 28 100.0 33 ............................ GGGTTGAGGAGCGCACAACGCGCACCCGCCGAA 2757267 28 100.0 33 ............................ CCACATTTGTAAATACGGTTTGACATTTTGCAG 2757328 28 100.0 33 ............................ CCCACATCCCCAGACACCCGCTTCTCAGCAGCA 2757389 28 100.0 33 ............................ CTGCACACCAGCCATACGACGAGGAACGGAAAA 2757450 28 100.0 33 ............................ CGCCACACACCATCAAAGGACACCAGTGGAATC 2757511 28 100.0 33 ............................ CGATCACAATGCCAGGAAAATCACGCAGCGCTT 2757572 28 100.0 33 ............................ CGAACTCGGCAACAAGTTCTACTTGTTTCTGCA 2757633 28 100.0 33 ............................ CAATTGTGCCTTGTGGTGCCGTGGAACTATCGG 2757694 28 100.0 33 ............................ CTCCCCAACACTCATAGGCTTACCACCCATCCA 2757755 28 100.0 33 ............................ CCTGTTTGATTTCGCGCCCCGTGTCATAGAAAA 2757816 28 100.0 33 ............................ TTCCCCGACGGTGATACATTCCACGACGCGGGC 2757877 28 100.0 33 ............................ GCTTAGGCAAACGGTGACGCCTAGGCCTAGTAC 2757938 28 100.0 33 ............................ CCGCCCCGCCGGGGTGCTCGGGTAGATCGACAT 2757999 28 100.0 33 ............................ CGAGCCTCGACAAGCCGACGCCACAAACGGAGA 2758060 28 100.0 33 ............................ CGCCCCGCAGCATCCAACGCCGTATCCAAAAAG 2758121 28 100.0 33 ............................ CCAAGCCAACCGGGGGTGAACAATGCGGGAACG 2758182 28 100.0 33 ............................ GACTCGGCTGGATCCACAACAAGCTCATGCTCT 2758243 28 100.0 33 ............................ CCACGCGAGGTCTTGGAAACTTTTTTTGAGTAG 2758304 28 100.0 33 ............................ CCACGCGAGGTCTTGGAAACTTTTTTTGAGTAG 2758365 28 100.0 33 ............................ TCCACCAGGCTTCACGGAAATTGTTTCTAGGCA 2758426 28 100.0 33 ............................ CAAGCGTCTCAAACCGGGGAGAGAGAGATTGAA 2758487 28 100.0 33 ............................ TTTTCATTCGAGGGCGAGTGCACAACGGGGTTG 2758548 28 100.0 33 ............................ CCGGGCGGTTCTAGCGAAACACCTGGTACAGAC 2758609 28 100.0 33 ............................ GCAGGTCGCCGAAGAGCGTGAGTACGAGGGCGA 2758670 28 100.0 33 ............................ CCACCCGAGATTTAACGATCCCCACCGAGCAAG 2758731 28 100.0 33 ............................ CAATTGCCGCTCTATGACGGCTCGCGCGTCTTG 2758792 28 100.0 33 ............................ CGGCACGCATCCACCTCATAAATGATTTGCGAC 2758853 28 100.0 33 ............................ GTAAATAACCACCCGGTGGGGCGCGCATACCGG 2758914 28 100.0 33 ............................ CCGCAGAAACTCCGCATCGAGGTCAACGCCGGG 2758975 28 100.0 33 ............................ CAGCTAGTGAAGCCAAAGGCATTAAACAAGAGC 2759036 28 100.0 33 ............................ GTACCTGGTTGTCCCTCTTGTTCCCGGTCTTTG 2759097 28 100.0 33 ............................ CTCCCGAGCGGTTGCCAGGTGTGTGATGTGTGA 2759158 28 100.0 33 ............................ CATCGACGCAATCGCCGACCAGCTGATCATCAT 2759219 28 100.0 33 ............................ CCTGCGGATACAGCCACGTTCGCCTCGGGAATG 2759280 28 100.0 33 ............................ GGAACACTCACACGATGCAACCACAAGGAGAAC 2759341 28 100.0 33 ............................ CACCTTCTACTTTTAGTCGATTAGTCATAGTGC 2759402 28 100.0 33 ............................ CTAGCGTGTCGCCGCCGTCGACGGCGGGGAGGT 2759463 28 100.0 33 ............................ GGATCATGCCCCGGCTCCATGCTCCATTCCTTG 2759524 28 100.0 33 ............................ GCAACCATCCCGGCCACCCCATTCAACGCCTGC 2759585 28 96.4 33 ........................T... TTTTATATGGCGTGGCGTAGTTTCTACCTCTTA 2759646 28 85.7 0 .......................A.CTT | ========== ====== ====== ====== ============================ ================================= ================== 51 28 99.6 33 ATCTGCCCCGCACCTGCGGGGATGAGCC # Left flank : GACGATGGCGATCCTCTCAATGCCGAACTATTCCTTTGGAACGAAATCTCTGCCATCCCTGCGGGAATGAATTGGTCGGAGGAACATCGATGATGGTCCTCGTCGTCACCGCCTGCCCTGCCGGTCTTCGCGGTGACCTGACTAAATGGTTGTTCCAGATTTCCCCAACCGTTTTTGTTGGGCGACCCAGTGCTCGGATCCGGGAGGCAATCTGGAAACGCACGGTGGAACTGTGCAAAGACGGATCTGCCATTTTGGTCTGGAGCTCCGATAACGAACAAGGTTTAGAGTTTCGTACCCATCGGACCGAATGGCAACCCGCCGACTACGACGGCCTCACTCTCATACGCCGCCCCGCGCGACGGCCTCCCCCACAGCGGCGCACCGGCTGGAGCAAAGCCCGCAACATGTACCGCTCCCGCAAACGGTAGCCGAAACTAGCAAAAACAAAGCTAAAGCCAAAACCCAAAATCGGCGCTCATCTCCCCTGCTCAGATAGC # Right flank : TGTAGTAAACTTCGCGCCACGGTGACCAATGAAGGCAGTCCAGCATTTTGTTTGCATTTGTGCCGATTCTGCCATCGGCTATCACTACTCCACTACTATGAGCGATATGACCACTCCTGATAGCGCAACTCCTGCCCGCCTTACGTACTCCGAAGATGCTCGCACAACGCTGGCCATAGCTGACGGTCGTGCGCACCTGCTCTCTGCGGATTCGCATCTCGGGGAGCTCCTCTATCTCTCCCCCGAGGCCGATTTTTCTGAGGGGGGCTCGATTCGCGGCGGGGTGCCGATCATCGCGCCGTGGTTCAATGATCTGACAGGCCAGGATCCTGCGCATGGGTGGGCGCGTCGGAAAGCGTGGGAGTGCCAGGAGGTGCCGGGAGGATTCGATTGCCGGATTCGGCACGACGAGTGGGATCTGAGGCTCGGCATTCAGACCACGCCCAAGGGCTTTGCGATAATCTTGAAGTGCAGGAATGCAGCTTCGCGCCGTCGCGATG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTGCCCCGCACCTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTGCCCCGCGCGAGCGGGGATGAGCC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 2857507-2860466 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068162.1 Corynebacterium glucuronolyticum strain FDAARGOS_1111 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2857507 29 96.6 33 ............................A CTGTTCATGAGTGCTCGGACTTTCGACGTTTGA 2857569 29 100.0 32 ............................. CTCGCCGCCAATCAAGCTGCAGCTGTAGATTC 2857630 29 100.0 32 ............................. GAGCTGGCGAACTCGAAAGCCAAGGACACAGC 2857691 29 100.0 32 ............................. CATCCAGATGGAAACCCCAGGCTCTGAGGCTG 2857752 29 100.0 32 ............................. GAGTACACCACGCTCCAACTGAATCCCGACCA 2857813 29 100.0 32 ............................. CATCCAGATGGAAACCCCAGGCTCTGAGGCTG 2857874 29 100.0 32 ............................. GAGTACACCACGCTCCAACTGAATCCCGACCA 2857935 29 96.6 32 ............................G CGGCCCGCACCCCATCCATTCCCCGCTGATCC 2857996 29 100.0 32 ............................. GCCGGGATTTCCACCGGCGTGTTCAAAGTCCA 2858057 29 96.6 32 ............................G CCGAGAAGCCCCGGCAGCTCGTCAGCCATTCC 2858118 29 100.0 32 ............................. CGTGCAGGGTTCGCGGGTGCGCGGTAATTGTG 2858179 29 100.0 32 ............................. CTCGAGAGGTTCGTGCCTGGGCTGCACTTCGG 2858240 29 100.0 32 ............................. CGTGCCCACACCATCACCGATGTCATCACCAA 2858301 29 96.6 32 ............................G AAGGAATCGTAAACCATTTCGTCTACCGGCTG 2858362 29 100.0 32 ............................. ACCGGCGGCACCCGACCCCGAGACACTGTCGG 2858423 29 100.0 32 ............................. ACCAAATCCACGCGTCTGAATTTGTTTGCCAC 2858484 29 100.0 32 ............................. TTCCACGCTTTGCGCCACAGTGCCGTCTCTCT 2858545 29 100.0 32 ............................. CCCTCGCCGGGGTCGACGTGGTCAGTTCCTCC 2858606 29 100.0 32 ............................. GTAATGAAAACCGCCTACCCACTCGACCTGCT 2858667 29 96.6 33 ............................G CGACTACCAGCGCTCATACCGCGATAAACTATC 2858729 29 100.0 32 ............................. TGGCAGCTATCGCCGGGGTGCCGATGCCTAAG 2858790 29 100.0 32 ............................. GCACGCACAGCCCGGTTCGTGGTCTCCTGCGC 2858851 29 100.0 32 ............................. CAGCTCAACTCTCTGGTGAAAGAATCGCGGCA 2858912 29 100.0 32 ............................. ATTGGCCTGTCCGTATCGTTTTGAACGTGTAG 2858973 29 100.0 32 ............................. ACCACCTGAGAAGAGAGTGTATCACAAATGGC 2859034 29 100.0 32 ............................. GTAGCCGGAGAGCACGGCCCGAGAAATAGCAA 2859095 29 96.6 32 ............................G CACCGTGCGGGACTCCGCCAGCTTCTCCTCAG 2859156 29 100.0 32 ............................. GCGGCGTTAGCCGCCGCCATCGCCGCGAAAGC 2859217 29 100.0 32 ............................. AGGAAATAAACGGCTTCACATTCACCGAAGAC 2859278 29 100.0 32 ............................. AACCGGCGTACATGCCCCCGCACCGGCACAGC 2859339 29 100.0 32 ............................. CTCAAACACGGTGCGGTTTTCACCCTCACGGG 2859400 29 100.0 33 ............................. GTCGATGTCGAGGTGGCTGCCTCCACGGCAATC 2859462 29 100.0 32 ............................. CTGCAACACGGACAGGCAGGGGCTTTTTGGAC 2859523 29 96.6 32 ............................G GTGCAGGCTGCTGGCAAGTTCCAGGGTGCTGT 2859584 29 100.0 32 ............................. GTACTGACCCGTACCACAGGTTGATAGTGGCC 2859645 29 100.0 32 ............................. CTTTATTCAGACATTCGTGCTAAGCGGATCCG 2859706 29 100.0 32 ............................. CAGCAAACCACCTCACAACAAGCGCGTGGGTA 2859767 29 100.0 33 ............................. GCTTGAGCCATTTTGAGCATCTCCAGTTTGAGG 2859829 29 100.0 32 ............................. CGATGGGCTTCCAGACGTCGGGGTCTTTTCCG 2859890 29 96.6 32 ............................G TAGTTCGCGGGGCAGTGTGAGGGCCTCCGGGG 2859951 29 100.0 32 ............................. AGCTCGTTCTTGAGGTCGATGGTTTTCATCTG 2860012 29 100.0 32 ............................. GCCTCGATCCGATCGCCCAGATTTTTTCCCGA 2860073 29 100.0 32 ............................. AACGTCGGCGATGGTGTCTCACAGGAAGTCGT 2860134 29 100.0 32 ............................. AGATCTCTATCCGACTCGATCCGAACCTTCAC 2860195 29 96.6 32 ............................G GCGTCGAAAGACGGCTCGCCGGGAATCCCCGT 2860256 29 100.0 32 ............................. GCCAAGGCTTTCACCTCCGCATCCATGGTGCC 2860317 29 100.0 31 ............................. TCTACCCACACAAAGAACGCGAGTTCTACAT 2860377 29 93.1 32 GA........................... TCATAGGTGAGGGTGTCCACGGGTTTGGCATC 2860438 29 72.4 0 .....T......TG.A.A......A..AT | ========== ====== ====== ====== ============================= ================================= ================== 49 29 98.7 32 ATTTTCCCCACGCACGTGGGGATGGTCCC # Left flank : TCATTTCTGCAGCACAGCAATAGTAGTGTTTTCACATCAGAAAAAGGACTGATGCTGCCATCAGCAAAGGGAATCCTGTTTAATAGCGAACTAGGATGGGAAGCGGCCGCGGAAATGGCCAAATGTGTCGGCAGACTTGGTATCGAAAACATGAATATGCTCGACACTGCGCGCAGTCGCGTTGGCTTGGGAGCACTCGTGCTTTTAGGTGCGTCCATTAGTATCCCCTGTCAGCAATCCTACGGGAGAGCTGAGAGGCACCTCCGCGTTTTACCACTTCCATCCTCTCCATGGCACCTGGAGAGCTTTCAGACTTTCGGAATCTCACCCGTGGTATCAGGGCGTCGAATAGAGACCACAATCCGGGTTGATAACAAAATGTCTTATTTCACATCTCGAATCCAAACGTAGACACTGTCAATGAAGTCCAACTATATCGTCAGCGTTTCAAGTTGAATGAAATTCGAGAGATCTTCTAATATCGATGCTGTTCAAGAAGT # Right flank : TGTTTTAACCAGAAATGACTCAATTAGAGAACTGGTTGATAAGTACCAATTGAAATGAGTTATCCCATTCTAGCTTCCATCCGTCAAATTCATTTTTCCCTTTCTGATTAGCTTCATCCCCTACTAAACAACGTTTGTTAGCATCGGCCCCCGTAAACACACTACCGATGAATAGGAGCCTCCCCCACCATGGAACGAATCCTGATTTGGACCGCCATCATTGCCCTCGCATTGAACTTGCTCTTCCTGCGCGATGCCGACTGGCTACTGTGGATCGGACTGGTGGCGATCCTCGCGTTTGAAGGCATCCGCATGGCCAAGGACACCAAGTCCCCCGCTAGTAACGAGAAGTGGAACGGCAAGCCCGTCTCAAAGGAGCAGCTCACAGAGGCCAAGGCACTACGGGAAGAGAACCCCGGGATGACGATTCCCGAGGCCCTCAATAAAGCAAGTGGCAAGTAGTACTACCCCAGCCTCCTCACCGCATCAACCACCAGATC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTCCCCACGCACGTGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //