Array 1 70393-70707 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAFEOX010000039.1 Staphylococcus sp. GDK8D42P GDK8D42P_contig_39, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	====================================	====================================	==================
     70393	    36	 100.0	    35	....................................	ATGGTATTTTGATAATCTGTTAACGGTGTATTATA 	
     70464	    36	  97.2	    33	.................C..................	TCAAATATTTTTTCTTCTTTTATTAAAGTCTCT   	
     70533	    36	 100.0	    30	....................................	AAACAGTATCCTTTTCATCTCCTAATTAAT      	
     70599	    36	  77.8	    36	T..TAT.G......T..G................G.	AAAGGAATGTCACACAACGTTTTTATTAAAAATAGT	C [70606]
     70672	    36	  88.9	     0	AT...............G...............G..	|                                   	
==========	======	======	======	====================================	====================================	==================
         5	    36	  92.8	    34	GATCGATAACTACCCCGAAGAACAGGGGACGAGAAC	                                    	       

# Left flank :   GTTGATGATTGGTGTTTTTCAAGTGCTATCCCTCATTCCCGGCACATCACGCTCGGGAGCTACAATAATCGGAGCATTATTGATAGGAGTATCACGGGTAGGGGCGGCAGAATTTACATTCTTTCTTGCTGTGCCAACCATGCTTGGGGCAAGTGCCTTCAAGCTGTTGAAATTTGGCTTTGACTTTACAAGTGCAGAATTGCTCACACTTGTCATTGGCATGGCAGTGGCATTTGCGGTATCTGTCTTTGTGATCAAATTTTTAATGAGCTATATCAAAAAGCATGATTTCAAGGTTTTTGGGTGGTATCGGATTGTGCTTGGTATTCTTGTTTTACTTATAACGGCAATTTAATAGAGAAACAATTCTATAAAAGATTATCTGCCGCACGACGGCAAAAGAAAAAAAGCCGTCGTACAGCAGACATATTTTCACGCCCATGAAACGGCGGCTTTGATTTTCAGAGCCGCCGTTTCTTTGCGTTTACACAAACCAATGG
# Right flank :  CCACATCTTAATGATCTCAATTAGCTTGGTTAAAAAGAAATCAATAACCTCCCGTAGAATTGAGAGCAAGTATTAAAAATATATTTGGTTTGATAAAATAATCTGCAAAAAAAGAGGAACAAAAAAATCAAGATTTAAACTGTAATTCATTGTTTTTGCAATTAATCAACATTCAATTTTTAAATAAGCAGAAACAAAAATAACTTTCATACAAATAATTTCTTTGAGATTAAGTTGGAATTAGAAAACTAATACTAAATACAAATAACAGTGAATGGAATGTATATTATTGAGGAATTTGATGCAGTGTAGTGCAATTTCGAGAGCTACTACTTAAGAAAATAAACAATAAGAATTAAATCTGAATCAAGATATAAAAATAAATATTTTTACCATAACTACATTAGTATAATGGATAAGAGAATAAAACATTTATTTAAAATTGCAGTAATCTCAGCATTATCTCTGTTTGGTTTATTTTTAATTTTAAACATAGTTTT

# Questionable array : NO	 Score: 5.62
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GATCGATAACTACCCCGAAGAACAGGGGACGAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [11,1] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GATCGATACCCACCCCGAAGAAAAGGGGACGAGAAC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.80,-3.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0.27   Confidence: HIGH] 

# Array family : III-A [Matched known repeat from this family],   
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