Array 1 1027900-1027218 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065992.1 Enterococcus hirae strain FDAARGOS_1057 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================================================================== ================== 1027899 36 100.0 30 .................................... GATGGGGACTTCTCTCAATGCGTGGGGATA 1027833 36 100.0 30 .................................... GTTTGCCTCTAAACTATCTCTGAAAGAGTT 1027767 36 100.0 30 .................................... ACAACGGACGAATTTGTTTACATTACGTCA 1027701 36 100.0 30 .................................... AGCGACCAGGATGATTTAGGCAATGTGGTA 1027635 36 100.0 30 .................................... CGACACACCCGACCAAAATAAACCACTCGA 1027569 36 100.0 30 .................................... ATGAACGCTAGAAAAGAAGAGTTCGAGAAG 1027503 36 100.0 30 .................................... AATACTTTAACTCAGTAGCTAAGATTCATG 1027437 36 100.0 30 .................................... GAGAAATAGCATGAAAACGAATTTTGAACG 1027371 36 94.4 83 ..........................T........T GTAGAAGCGTTGTGCTTTACTCGATCGCTGTTTTAGTTTTGTGTTATTTTGAGTGCTGGCCTCATCAACTATGATAAGAGGTA 1027252 35 77.8 0 .C.......T................AA.G-..G.T | ========== ====== ====== ====== ==================================== =================================================================================== ================== 10 36 97.2 36 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : TAAAATCAAGGATTGATCAATTAACTACCAGGGTTCAGGAATGGATTAGTGAGGAACTCTTAGAACATGAATTAGATTTAGTTTGTGAAGAAATGAGTATGGTTGAGCTATTCAAAGCATTAAAAATAAGAATTACGACGCAACCAGAATCAATTTTTCAAAAAATAATGGAGATTTTACAGATTTATAAGTATCTAGTGAAAAAGAAATGCTTGGTTTTTATCAATGTTGGAGCGTACTTAACAACCACAGAAATGGCTGAACTACAGGAATATATTTCTTTGTGTCATATGCCTGTCCTTTTTATCGAACCACGAAAAATAAAAGGATTGAAGCAAACTGTTTTAGATCAAGACTATTTTTTGTGTGTAGAAATGTGGTAAAATAAGAACAATCAAAATAACAAAAAAACAGCATGAATGAGCATTCAAGACGAAAGTTTTGCTATGGACGAGTAGCGCGATTACGAGATCTTGTGAGAAAAAAATTTTTTCTGCGAG # Right flank : GCCTACTTTATCATGAAAAGTAGGCACTTTTTTTACTTATATATAGGAAAGTGTCTTCAGTTGTTGAATCTGCTAAGTTTTGATCATTGAAAGGGGGAATCGTGCCTTTTAAAAATGAATGGGTATGTTTACGGAACAGGACACAATTGTTCAGTCTTTTCAACATTGAAACGAATTCATTTTCTCAAAGAAAAGATGAGTTGCTAATTTCGTGCTTTTTCTCTATCATCAAACAGTAGGCATTTGTTCGTGAACTAAAATGAATGTGAGAGGGGACAGTGAGATGTTTGATACAAATTTGATAACTTATTTGGACTGGTTGATCGCAATTTTGAATATTGCTTCAATCATTATTTTGCTGGTAGGGATTTTTTTAGTCTTAAAAAATCTTTTTGACTGGCACCCACTGAAAAAAGACTACGAACAGCGTAATTTCCGAAATGCGGAAGTACGCAAATTATTGGCTAGTTATATTTTGCTGAGTCTAGAGGTGCTAGTGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 2 2680313-2680612 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065992.1 Enterococcus hirae strain FDAARGOS_1057 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2680313 36 100.0 30 .................................... ACCAGTCGTGGGAGGTGTGTCGGGAGTAGA 2680379 36 100.0 30 .................................... TTACTTCGGATTGCTTGCAAAAGGGAATTT 2680445 36 100.0 30 .................................... TATTGATGAAAACGGAATCTTTAAATTTAA 2680511 36 100.0 30 .................................... TTGAGTTATACTGTTTTAAATTGTGAAAGA 2680577 36 86.1 0 ..........................T...TG..CT | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 97.2 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : ATCAAATCGAAGGACGGATTTTTGAAGGTCAAAAAATGGTTGTGATCGAAGATTTGATCTCGACAGGCCAAAGCGTTTTAGAAGCAACGGAAGCAGCCAAAAGAGAAGGCGCTAATGTATTAGGCGTAGCGGCGATCTTTACCTATGAACTACCAGCAGGTGAAGAAAATTTTGCCAAAGCAGAGTTACCACTATTTACTCTCACGAATTATTCTGTCTTAATCGAAACAGCGTTAGCCGAAAAATATATTGATGAAGCGGAATTAGCCTTGTTAAAAGAATGGAAAAAGAATCCAGCGGACTGGTTAAAACAGTAACGAAGAAAACGAAGATGGAACAAAAACAAAAGACTCAAAAAAGGGCTTTCGTTGAACAAAATCCATGGTATACTAGGATCAAACAAAACAACTGAATGAAACAAAGGAAGCATCCAAGACGAAAGTTTTGCTATGGACGAGTAGCGCGATTACGGAATTTCGTAAGAAAAAAATTTCTGCGAG # Right flank : TAATAGTTGCTGTGCTTCGCTTGTCGTTTTTAAGGCGAGGAGCTTACACAGAGTTGGTTTTGAATCTTATGATTATTTTGATGGAAACTAGAGTTGTTTTTCTGGTTTCTATTTTTTTATAGTAAAATTGCGTGATTCTCAGTAAAAAGATTAATTTTTCGTTGATTTACAAACGGGATGTTTGCGAAAGATAGTTATTTAATGATAAAATCATCGGAAAAGTAAAGGGGAGGCTATTTTATGGGATTGAATGAATTTATTTTAGGTTTGAATAATTTGGAAAAAATTACACGAGCGCCAGGGTTCTTTAAATTTACTGAACATACGGTAGCCGCTCATTCTTATCGAGTGGCTTCGATTGCTCAAGTCTTAGGTGACATTGAAGAGGTTCATGGTCAAGCAATCGATTGGAAATTACTTTATGAAAAAGCGTTAAATCACGATTACACAGAACGTTTTATCGGGGATATCAAAACACCGGTCAAGTATGCAAATAAAGA # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //