Array 1 518269-518629 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYY01000008.1 Clostridium botulinum B2 267 B2_267_contig008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 518269 31 96.8 35 ..............................G CATGTTGTGCAGATAAATCAAGATATATTTTAAAA 518335 31 100.0 35 ............................... TTATATTCTCTATTTTTAATCCTTTAAGTATTGGA 518401 31 100.0 35 ............................... GATAAATTTATGAAAGGTCAAGGAAGTATAGCAGA 518467 31 100.0 35 ............................... TGTAATAATACACTAATACAGTTAAAGTGCAAGAA 518533 31 100.0 35 ............................... ATTGTACTTTATGATTTAAAACTTGACTTTTATCT 518599 31 96.8 0 ..............................C | ========== ====== ====== ====== =============================== =================================== ================== 6 31 98.9 35 ATTGAACATTAACATGAGATGTATTTAAATT # Left flank : AATGTTTCATAAAGAAATAGATTATGAAAATATTAAAGAAGGAGAATTAGATGAAATTTTAGAGGGGATAAAAAAAGAATTTTATAATCTAATAATATCAGTAAAAGAAGAAAATAAAAATATAATATTAGTTACTAATGAAGTAGGTTATAGCATTGTTCCAGCCTATAAATTAGGTAGGATATTTAGAGATTTTCAAGGTATTATAAATAAATTTATAGCTTCTTTGAGTGATGAGGTTTATTTAGTAACCTGTGGAATACCCTTAAAAATAAAATAAAATTAATTTTAGTAACTAATTAATCTAACTATAAGTAAAAGAATTTTCCAACCGCATTTAATTTTAAAATCTATTCTAGGTATTGAAATATAAGCTTTAAGATAAGTTTTATCTCTACCTTTATAAAAAATGGTAAACGGTTGGAAAAATTTCTTTAAAACCTTGTAAAATCAAGGCTTATATGATATTCTTAAAATTAAGAAATGGCTATTTTACTATG # Right flank : CAGCATGTAAAATAAGGTGATTCAAAATAAATTAAATCTATTTTGAATCACCTTATTTTTGTGTAACAAATACAAGCTATTTTAGATAATATTTTAAAAAAGCATATAATTATTATTTTATATTGTCACAATAAACATTAATAGCATCTCTTAAAAATTTAGAAAGACCAGTTTTATATTTATCTATATTAGCAGTAAATCTTTCATCATTAACATAAATTTCTCCAAGACCTCTAAATATTTCAGGAGTACAATCATAAAAGTTTTTTGAAATATGCTCTCTAGATTGGTGTATATATTCTTGAACTTCTTTATCATCTGGATTTTTGTCCATAAGATTTGCTAGTTTTTTATAAATAATATCCCAATCTTTCATTATATTACTCCAATCTTCCTTTGTATATTTAGATGTTTTTTCATTACTTTCTTTATAAGCAGAGGTGTTTCCATATTTTTCTTTTACCTCTTCTGAATATTTTCTTTGATGCTCCTCTATTTCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 964290-964519 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYY01000008.1 Clostridium botulinum B2 267 B2_267_contig008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 964290 29 100.0 37 ............................. TTAGCTTTCAATGCCATAGCCATAGCTTTGTTACTAT 964356 29 100.0 37 ............................. TTTATTTATCACCTTCTTTAATTGTATAAATGATACT 964422 29 100.0 38 ............................. TAATATAACTTTAATAGTATGATAATCTGGAACTATTT 964489 29 96.6 0 ........A.................... | TA [964513] ========== ====== ====== ====== ============================= ====================================== ================== 4 29 99.2 38 GTTGAACATTAACATGAGATGTATTTAAA # Left flank : ATGCTGAAAATATGGCTAATGCTATTGTTAAAGGACTAGTAGGGGAAACTACAAGCAATATCACACCAAGTCAAGCATCTACAAATAATAATAGTTGGATTAATTTAGATGGTAAAACAGGCACTATAAATACACTAAGTGGTGTAAATATTAGGGAAAAGAAATCTACATCTAGTAGAATATTAGGTGCTTTAAGTACAATTATATAGAAAAGAAGGAGATTGGATACACATTTATTATCCTCCACATGGTGGATATGTTTATGCTAAATATATAAGATATTAAATTTTTGAAGGTATTTCTATAATGTGAGTAACTTTTATTTTTCCAACCTACTTTAATTTTAAAATCTATCTTAACCATTGCTATACAATGCTTTAGGGTAGGTTTTCTATATAAATTTTAAATCATCTCAATTGGTTGGAAAATTTTCTTTAGAATCTTGTAAAATCAATGCTTTTATGATATCTTTAAAATTAAAGAATGGCTATTTTACTATG # Right flank : AAATAATAATTGTAGCTTACGCTGTAGTTATTATTTTTTTATTATTCAAAGGAATTTTCTAACATTTATAGAATATTAAATATAACGGCTTACCAATAATTTAGGCAACCTCCTTGCTTAAAAAAAAGAATCCCAATAAAAAGGGGTTCTTTTTGAATGGAATTTTCTATATATCTATATATTGGTGCTATGTTTTGGTCTATTCTTATTATATCCAGATGTAGAAAAATTAATCAATCAGAAATATATAATATGTAAATTTTTAAAGGTACTTCTGTAATGGAAGTACCCTCTTTTTTTATTGGAAAAATTATCATAATTTATATAAATTTATCATGAAAGCTATTGATTTATTATACTACACGTAGTATAATTATAATTGTAAGGAGGTGAGAAAAAAGGTGGTCAAATTAATAAGAAAATTAAAAAAGCTTGATAAACTACTGGGAATAGTCATCAAGCTACTGGTAAAAATAACAATCATAATAATGCCGCTTAAA # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 1487617-1487191 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYY01000008.1 Clostridium botulinum B2 267 B2_267_contig008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1487616 30 100.0 34 .............................. TCAAAAACTAATTAATACGTATATAATTATAAGA 1487552 30 100.0 36 .............................. ACCAATAGGAATGATAAAGAATCTAAAAGGGGCTGT 1487486 30 100.0 36 .............................. CTGTCATATGATTCACAAGCAATATAAAAATAATCA 1487420 30 90.0 36 A...............G...A......... ATTAATTTTTCTTTAAAATATTCTTGGTACGCCATT 1487354 30 100.0 37 .............................. TAGATAGGCCCATAAACAAGTTGAACCTGTTCTCTTC 1487287 30 93.3 35 ........T......G.............. ATATCTGTCATGAAAGTTAAAACTTTTATGTTCCC 1487222 30 86.7 0 ...A....T.......G............A | TA [1487195] ========== ====== ====== ====== ============================== ===================================== ================== 7 30 95.7 36 GTTGAACAATAACATAAGATGTATTTAAAT # Left flank : TATGTGATGCCAGGGTAATGCCAGGACAAAGCCATTCATGTTGTGATTATTTAGGAGGACATGTGGAGGCTGTACATTCACGTGGCGATGGAACAGGTTGGGTCGACTGTTCCCGTTGTGGTAAGATACTAAGATCCTAGATAAAAGAAAAAAGATTATTTAAACAAGAGAACCCCAATAAAAAGGGGTTCTTTTTTGTATGGATTTATATATTGGTGCTATGTATTGGTTTATTTTTATTATATCCATATGTAGAAAAGTTAATCAGAAATATATAATATGTAAATTTTTAAAGGTGCTTTTATAATGGAAGTACCTTTTATTTTTCCAACCTACTTTAATTTTAAAACCTATCTTAGTCATTGCTATACAAGGGCTTAAGGTAGATTTTTTATATAGATTTCAAAATATTACAATCGGTTGGAAAATTTTTTAGAGAACCTTGTAAAATCAATGGTTCTATGTTATCCTTAAAATTAAAGAATGGCTATTTTAATATG # Right flank : TGGTAGTTGTAGTTTACGCTATAACTACCATTTTTTTATTACCTTAAAGGAACTTTTTAACATTTGTAGAATATTAAATATAATGCTTCCCAATGGGTTAATTATAGACCTCCGTATTTAAAAAAGAACTCCAATAATAAAATGGAGTTCTTTTTGTATGGAATTTTATATATTGGTGTTGTGTTTTGATAGTACCTCTTTTGTATTATTTTATTGAAAAACAATGTAAAATGTCTGAATTTTTGGTAAAAATTATAAAGGAAAAACTATATAAATGTAGAAATTATATAATAAGAATCTGTTAAGTTAAAATGATTTAACAGATAAAATAATATAAAGGGGGATGGCTAAATGAAAAAAATTGTAATTGGTCTTTTAACAGCATTGATACTTGGGGTAAATGTGTCTAGTGCCTATGCAGCAGAGGCTTGCCCAAGATGTGGTGCTACGGTTGGGCGAGGAGAAAATCATAAATGTTGCGATTATTTAGGTCATGATTT # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 4 1785352-1785574 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYY01000008.1 Clostridium botulinum B2 267 B2_267_contig008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ======================================= ================== 1785352 27 100.0 39 ........................... CTCAGATGGGCGGTGCAATGTATTGGAATATACTTAAAT 1785418 27 100.0 37 ........................... TATAAGGTATAGTGAGAACAGAAAAGAATATGCCAAT 1785482 27 100.0 39 ........................... TGTATACAGGAAACAATAATCTAAATGATATTTTCTAAT 1785548 27 96.3 0 ...................T....... | ========== ====== ====== ====== =========================== ======================================= ================== 4 27 99.1 39 TTAAATACATCTCATGTTAATGTTCAA # Left flank : ATTACGAAATTTATCCACAATGCTCCCTCCATATTTTTATAATATATTTCCTACACAAATATTCTTCTACAGAGTTATGGATAATCCTTCAAAAATACAGAATAATATACAATATTTACACGACTACAAAAAACTATTTTATCTATTCCCTTTAAATACTAAAAACCTGTCCTAAATAGACAGGTTTTTAAAATTAAATTTATTTATGATTTGCATTTTTCTTTTTTGAAAATTCAAGTGTACAAAAACATATTGCTGAACAGATATATGTAATTCCCAGCAATGTTTTATGCTGAAAAAAATTTAACATAGCCACAACTACAAGCAATATTGCTGCAACAAAATTTAAATTATTAGTAACTTTATTTTTCATAAAATCCCCCTTTATCTAATAATTTACATAGAAATTATCACAATGCATAGTTTAGTTTTATAAAAATCCCTGTACCATTCTTAAAGAGTAAGCGATCCACACCAAATCTTAGATTTGGGTTCTCTGC # Right flank : ATCATAATAAAATAGCCATTCCCTAATTTCAAGAATAGCATATAACTATTGATTTCACAAGGCTTGGTAGAAATTTTCCCAAGTGATTTTGCTTTTTTAAAAATTCATAATAAAAACCTGCTATAAGCCTTAAATGTCAATAGCTAGAACAGATTTTAAAATTGAATTCACTTGGAAAAACTTAAATTAATACTTAAAAAACAAATGGAAATTATTATGGTTAAAGTGAAAATTGTTTATATACCTAAACAAGAACTTTTTTAAATATCATCTGTTAACTTCATGTAATATTTAGCCCTTTTTAAGGCTTCTAATTGATACATTGCTTCTTTTTCTTCTATCAATTTATAATTATTTTCTTCCTGACCAAATTGTGTAATAATAGTTTTCATAGACATTCCCATAGAACGATACTTTGTACAGGTATTTGTTAAAAATATTATCCTGTTGCTCTGTTGAAATAATTTACTATTCCTTTAATCAACAATAATAAATTCAAA # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTAAATACATCTCATGTTAATGTTCAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 5 1796349-1796124 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYY01000008.1 Clostridium botulinum B2 267 B2_267_contig008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 1796348 31 100.0 34 ............................... TATTTAAAAAAGAGAACTTGGGTTTTATGTCTAA 1796283 31 100.0 35 ............................... CCATTTTTCTATCTAAACAAAGTTGGTAACAAGCT 1796217 31 96.8 33 ........T...................... CGATCTTACTATAAGTTTTCACTCGTTATTCTG 1796153 30 77.4 0 .C.A....G...T..A.........-....T | ========== ====== ====== ====== =============================== =================================== ================== 4 31 93.6 34 GTTGAACAATAACATGAGATGTATTTAAATC # Left flank : GATAACTAGTTTAGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCATATCCAATACCACCCCCTATTTATAAGTGAAAGACTCACCAATATCCTAGGAGGATAAAATATTCAAAACCCCCGTAGCCATCCACTACGGAATTACTATCCTAACTTGGATATTATATCATAATTATCTATACTAAAAACAGAGGAATTAAATGGTAAATAACATTTTAGTTTAGAATACTACGTTTATTTTAGGATAAAAATAACAAATAATTATATAGAATACGCTAATATTTTTCCAACCAACTTTAGCTTGCAAACCTATCTTAGCTCTTGAAATATAAGGCTTAAGGTAGGCTTTTTTTATATATTTATAAAATATTATAATCGGTTGGAAAATTTTCTTTAAAACCTTGTAAAACCAATGTCTATGTGCTATTCTTAAAAATAAGGAATGGCTATTTTGCTATG # Right flank : GGGATATGATTTTTACATTAATTAAATAATAATCGTAGTTTATTATAAAATAGTATGGAGGTAGATTTTGAAGCTTAAAGTAGTATTTTTAATTAGTCTTATTATGTTTATTCTTGGTATATACTTTCCCAATAAGTCTAATTTTATGATTTTAATTGGAATATTAGGTGGAGGAATAATGGGATGTGTATAAGCATTTATAGGACATTCTAGAACAAATGTTATTAAAGATAAAGAGACTAGTTCATAAAAGAATTAATTTTTTATTATCTCATGAATTAGGCATGTGTTAAAGTTTTCAATATTAACATAAGCATTAAAAATTAATATTATATATGATAAAAATTACTAGAAGTCTTAGAAAAATCTAAGGCTTTTATTTTATGCAAAGATTTAGAATGGAATATGATAGGTAATTAATTTATTAATAAAAATAATAATATTTTTAAAATATAAGTAGAATAATTAGTTATATTAACTAAAAGGTGTATGGTATAATA # Questionable array : NO Score: 5.54 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATGAGATGTATTTAAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.19%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 6 1797556-1797260 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYY01000008.1 Clostridium botulinum B2 267 B2_267_contig008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1797555 30 100.0 37 .............................. AATTATATCTTTCTTTTGTTCTACCCAATAAATAATC 1797488 30 100.0 36 .............................. TAGATTATTGGAGATATAGAAACAAATCCTCTTTGT 1797422 30 100.0 36 .............................. TTATAATGTCTTGACGTTTTTGCCTAAATTGATGAC 1797356 30 100.0 37 .............................. CTGCGTTTGTAGATATTCCTAGCCTGTCCTTTATTTC 1797289 30 90.0 0 .......................C.G...A | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 98.0 37 ATTGAACATTAACATGAGATGTATTTAAAT # Left flank : AAAAGCCTACATTCATGTATTTACTTTGTTTTTTGTAGTAAATATTTATGATATGATTGTTTTAGATATATGTATTTTTTGTCACAGTAAAAAAACTAGAATACCTGGTACAGAGGATATGGATAAAGAATATAGGAGTCCATGGCATCATATAAAAGGGGCTGGTATTGGAACTATAATAGGTGCTGTAGTAGCATTATTATCTGGAGGAATGCTTCATTTCATATCAATAATATAGTATTTAAGCAGGGAACCCAGATCTTAGATTTGGTGTGAGCCGCTTACTCCTTGGAGAGTAGGATAAAGAGTTTCATAAATTGAATTTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGCTATTGGTATATAAGGCTTAGAATAGGTTTGTTTTATGTATTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAGAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTGCTATG # Right flank : AAACAAATAACGATGAAAAGATAACAAATAATAATTAAGGTGGTTTTTCATTGACAAGGTTTTTCAACATTTTGAAATTGAAAAACTAACAGCAAATATTATACAGAAAACTATAGAGAATCAATTATAAGCAGTAAAATCTAATTTTATAGTTAGTTTTTTTATAGAATTTTATAGTTAAAAAATTAAACATATAAATATGTGTTTATTTTTTATATAAATTTGATATAATATAAATAAGAAAAGCTTAGTGTTGGAGCACTAAGCAATCCTTAGAACATTTATTTTGTTTTAGGGCTATTGGATGAATTTAATAATTAAATTTCAGAGATTAAAGCACTATTCTTGGTCGGATGGGTGCTTTTTCTCTTTGCCATTAAGTTCTATGTGAATACCAAGAAATTTAATCTTGATAACTAGTTTAGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCA # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 7 1811191-1810764 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYY01000008.1 Clostridium botulinum B2 267 B2_267_contig008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1811190 30 100.0 35 .............................. ATTTTTATATATGGTAAGGAGGTAACAAAAGTGTT 1811125 30 100.0 37 .............................. CATACAATGTCTGTTTTACTTCTTCCCGTCTTGTTAC 1811058 30 100.0 38 .............................. CTGTCTGTTTTTGTTTCATTACTAGTAGAAGTATTTAA 1810990 30 100.0 37 .............................. GCTGTTAAGCCTTTTATGTTCTTAAACTTGTACGTAA 1810923 30 100.0 32 .............................. TGGAAGCATGGAGGGCTAGATTGGACAAGTAC 1810861 30 100.0 38 .............................. CTAATCCCATGTATTTTCCAGAGCTCAACTGGAAGAAT 1810793 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 7 30 100.0 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : AATATTTATGGTGTCAGATACTGTGCGTCCATTATAGTAGTTTTTCCAGGTAAATTAAAAAATAAAAGTAATGTAAACTCAATCATATTAGTGGTTTATATAGGACTTTTTATAGAAATTTCTATTTTATAAAATCATCTGGAAAGCTTTCTGGAAAATTTTAGTATTTAAATGGGGGTGTGCTATTTTAGATTTTAAGGAATATTCATTTTACAGTGGTTGAACCTTAACATAGGATGTATTTAAGCAGGGAACTCAAATTTACAATTTGGTGTGAGTCACTTACTCCTTGGAGAATAAGAGAAGGAGTTTTATAAATTGAATCTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGCCGTTGATATATAAGGCTTAGGATAGGTTTTGTTTTATATTTATTAAAAAACGTAATCACTTGGAAACCTTTCTATAAAACCTTGCAAAATCAATGGTTGTATGATATTCTTAAAAACAAGGAATGGCTATTTTACTATG # Right flank : ACTATATCTCCTCTTGTAGCGGGAGTTCCTATACCTGTTGAACATTTAAGTTCCTTTTAGGTGCAATTATTTTTGGGTTATTGACTTGTAGTCTAAAGCTACACCATAAGAAGGTTCATTAAACACATGTGGAGGAACAAGTAATAGATACAGCACTTGCTATTGATGCGGTGAATTGTATTACAAATAACGAAGGTTTTATTTAAAACTGTTCATATGGCTGGATTTAAGAAATATAATAGTGTCCTAAGTTGTATTATAATCTAAGTAAATTATAAAAATATATGTTTATATTTATTTTAAGACTATTGTATTAATATGATTCATCCAGATTTAATTGTGAGAAATTTCATTATAAACTTAATAGGGAAGTCTTAGATTTTTTATTGCATGAGATTATACGGAAAATATTAATTTTCACTATAACTTAACAAATGATTGATACAATTTTAAAAAAATCAGGACCTACAATGATAAAGTAGGTCCTGATTTTTATTAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //