Array 1 45697-45341 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAACBY010000040.1 Corynebacterium macginleyi strain 12T66 HBRU112_40, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 45696 36 100.0 28 .................................... GCCGAGGACAAGGACAACCACGTCGCCG 45632 36 100.0 28 .................................... CCATCAGCCGCCACATGCCCAAACTCAA 45568 36 100.0 28 .................................... ATAATGGCAGGCAACAACGAGACGATAA 45504 36 100.0 28 .................................... CTATACAATCACTACACCTACGATGATA 45440 36 100.0 28 .................................... GGTACCGGCGTAGCGTGACAGTCTCTTT 45376 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 6 36 100.0 28 GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Left flank : CGGTCATCGTCATATGCCTTTCGGTGAGATGTGGTAGTTGAGTCGAAAGGTTAACTGACGGTGACCGTCCCACTATTTCCGGGGCCCACCATCAGCAAGCGTTACACCACACTACTGGACGCAACCAC # Right flank : GAGTGCGGCCCGAAAAGGGACGTTTAACTGGAGTTTATTGTCGATCCTGCCTTAAAAAATTACGAGTTGGGACGGTTTTTTCTCTACTTCTAGGGGTTCTGCCTTAGAAAATCTTATGGCCTTTGCCCACTGATTATCAGTGACGGAAATTATCCTGATGTCGCCACCTTCAGGGAGGGTAGTCTTGATTTGTTTGACGGTCGAGGCAATCCTAGAAGACAGTGGGAAGTATTGGACATAAACGCTTAGTTGGGATCTACAGAATCCGAGGTCTAAGAGATGGTTTCGGAATTTGTTTGCCTCACTGGTTTGTTTCTTAGACTTAACGGGCAGATCGAACATCACCACACACCACATTGGTTCACTATCCTTCGCTGGCATCAAGGATTCCTTCCCATCGGGGCACGCTTAAGTCACGAATTGCTCCCTCGACGTAGAGACCATAGTGCTGGCCAAATTCATTAAATACAGTGCTTAATGATTTTCCACCAGCTTCGAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.70,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.01,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], // Array 1 518-161 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAACBY010000085.1 Corynebacterium macginleyi strain 12T66 HBRU112_85, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 517 36 83.3 28 A.A.AAT..T.......................... ACACCCACCTCCGCAAGCATCACAAGTC 453 36 100.0 28 .................................... AAAACGCACAACAACAGCTCACCCAACA 389 36 100.0 28 .................................... ACCGTGGTAAGTGCACGCATGGCCTACC 325 36 100.0 29 .................................... TACCGGCGGTGCTCAAGGTCACGGTTGAG 260 36 100.0 28 .................................... ATGTTGCGGGCGCGTCGGATTGCTGGTA 196 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 6 36 97.2 28 GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Left flank : CATCGACCCGCTTGCGTAGCTCTGCTACCGGAAGCGTGGCCACGAACTTAATCTCCGAGCGGGAGTAGCGGTCCTGGCGCGCGCCCGCGGCCTGGGCGAGGTCGTGGTAGATGCGGCGGGTGCGCAGGAGGCCATCACGAAGCGCAAGTGCCTGCATCAAGTTCTTCTCACCATCAAATTCGGTGGCCACGTTCGTGGCATTAATGGCCTGCACCAGCTTATCGATGCGCCCGGTAATACCCTCTAGCTCGCGCAAAAGCTCGGCTGGGTCCTCATCCGGGGTATCGCCCTCCTGCACGCGGACTACGGAGAGCAGGCGATCACGCAGCTCATTGAGCCGATCCTGCGCCTGCGCGCGCTCTGCTAATGCCTCTGCTAATAGCATGGTTCCTCCTTCAGGATAGTTAAGGACCACAGTAGCCGGGGTGGAGAGCTGGGGTCAATGGTTTCTGAGATACCAGTTGTAATACCGCGGGCGCATAGTTTCGTAAGATCTGGCA # Right flank : CCGGATAAGCATCGTTTCTTGTGGCCACTGCTGGGGGTCAAGTCCCGTGTAGTGGTGTAGCCGTTTGTGCTTTCGGCTCGGTATTCAGTTCTGTGTTTGAGGTCAGGCGGTTAGCTGGTTGTGGTCACCATTGGCGTCTCCTGTGCGGTGCATGAGGTGTC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.70,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,4.77 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //