Array 1 50738-53686 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWHC01000033.1 Cyanobacterium sp. IPPAS B-1200 NODE_12_length_80222_cov_22.1204_ID_17377, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================================== ================== 50738 36 100.0 36 .................................... TCCTATGGAAGTAAAAGTACCTATAGACGTACTTAT 50810 36 100.0 40 .................................... TACCTCTATCTCTACAGAAGCAGGAACATGCACTAAGGGC 50886 36 100.0 41 .................................... ATGAAGACGAAGACATGTTCTGGTCTTATCTTCATACTCTA 50963 36 100.0 41 .................................... AACTATTGACTTATGGGATGGCTCTATCGCTGGTAGTGACA 51040 36 100.0 45 .................................... TCGTTGCAAATATCTTGATAGTTTTTCATCTTTCTTTTTAATAAA 51121 36 100.0 44 .................................... TGAATTAGAATTAGATTTGGGTATGTAATCAACTGACAACAAAC 51201 36 100.0 46 .................................... AGTGAGATTGTCACGTCTATTTTGTCCTCTAATAGAGCTCTCCCTT 51283 36 100.0 44 .................................... GAGCCTTACTAGCCCATAGATGTCGTGATTGACAATAAACTCAT 51363 36 100.0 38 .................................... TATGGGTGATCTCTTCTAGGTTTTTACTGGTGTGGAGA 51437 36 100.0 44 .................................... GTCCGATTTATTTATTATTAATGGTGCGATCAGTTCTAAGGTTG 51517 36 100.0 42 .................................... TGAGCGAACGAAGCGAAGCCCCGTGTATACAGAATAACTACT 51595 36 100.0 43 .................................... CTTCATCAGTATGATTTTTTAGTCTTGCCCTCGCGTCCTTTGC 51674 36 100.0 41 .................................... TCTTTACTGCTGCGAGGTTTGCCAGAGTAACGTTCTTTAAC 51751 36 100.0 42 .................................... ATTTTTGGGGCATTATTTTGGGGTAGTGCAAGCCCTAAACCA 51829 36 100.0 39 .................................... AATCTCTACAGTCTCCCAACCAGTAGGGGATAATTGCCG 51904 36 100.0 41 .................................... GTTCCCTGGCTCTGCTACTTGCTTATACATCGTTGGGATTG 51981 36 100.0 46 .................................... ATCACTTACTTCACTATTTCGTTTAGTTTTTTTGATTGTTACATCA 52063 36 100.0 40 .................................... AATTACCACGGCGATCCCTCATGGCAGCCCGCAATTTTAC 52139 36 100.0 40 .................................... GTCTCTAGTAATTGGTGCAGGTAAAATATTGAACATAAGA 52215 36 100.0 42 .................................... AGTAGTTTCATTGTTATTTTTAAATACTCTCAATTTATCTTG 52293 36 100.0 42 .................................... CGAGGCTCACTGTAGGGTAGGCGAGAGTTTGGATTGGTTTGC 52371 36 100.0 47 .................................... TCATCATCTAATACAGTAGTGAATATATCGTCAAAATTATTGCTATA 52454 36 100.0 48 .................................... ATTGATTCTATGATTTGATACCGTAACGCTGTAACCGTTAATCTTTGA 52538 36 100.0 42 .................................... TAGATTCTAGTTGACTGATAGGGTATAACCTAAAATTGATAA 52616 36 100.0 35 .................................... TTTTCTACCTTATGCTTAATTTCCAGGGTAGTATA 52687 36 100.0 40 .................................... ATGGCTATGTTATCAGTATTATCGATTATGTAATCTAAAA 52763 36 100.0 52 .................................... TTAGTAGCTATGTTTGTTAATGCACTTACATCCATGGTTTTTTCCTCTTTGT 52851 36 100.0 48 .................................... AGCCTCAGCATTGTTGATTACTTTAGAAGCCGCATTGATTTGTTGAGT 52935 36 100.0 36 .................................... GAGTGTGTCCAAACATCTTTACCTAATGCTGCCGAT 53007 36 100.0 42 .................................... TAGATATTCTATGCACTCCTGTATAGACTTACTAGAGCAAAC 53085 36 100.0 47 .................................... CTGATTTCTTCATAACCATGACCAACGCCACCATAATTTACATCTAA 53168 36 100.0 39 .................................... ATGAACTCTACCCAAGGCACGCCATATACAGCGCTTAGT 53243 36 100.0 45 .................................... AACGTCTAGTAATAGCTTTCTGTATGTTCTTGAAGAGGCTACAGA 53324 36 100.0 42 .................................... AGTAGGACTTAGGCATATTAATCTTAAAGGTATACAATGTAG 53402 36 100.0 48 .................................... ATACGGGCAGATGGGTAGAAAAGGGCACGTTCCTTGCCTTCTATGTCT 53486 36 100.0 49 .................................... AGGAGTTGCCAAGCGAGGAGGAGGTAGTGGGATTGATAGAGCAATGGAT 53571 36 100.0 44 .................................... TAGCTAAATCCTTATAAGTTTTTTTGATTTCTTCAACAGTTGAA 53651 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================================== ================== 38 36 100.0 43 CTCTCCTTTAATAGGGGAAACTACTTGAATGGAAAC # Left flank : GTTTTCCCGTCTTCCTTCGTGGGGGGAGAGGATAGGGATTGTTCCTCGGTTTTACTCTCCTTCTTGTTGAGTTCAGAGGATTCTGGTTGCTTGTCTGTGCTTACTAACTGTGCAAATAAATCTTGTTGCTTAGGGGTTATGGTATCTGAATTATCTAACGTTTCCTCTGGTTTAGGAGGGGGATTACTCGTAGTTTCCTGCTTATCTTCTGTGGTAGTCTGCTTGACTTCTTTTGCTGATAAATCAGCTTTATTTTCTAACTCATCAATGTTTATTGGCGAGGTTTTAGGACAACAAATCTTACAAGGTTTAGCGCCAGTAGCTAGGGCATCCGAGTATGAATCCATCTTTTGCCACCCATCAGTATCTGGTTTGTAGTGACGGCATTGTTGAGCATGAATTTTATTGGTGGGGGAGATGTAATATATGGGTGCTGTTTCTTCTGTCATGTTTTGTAACCAGTCAACAGTACCAGCAAACCCATAAGGATGCCATACACA # Right flank : CAATTACTACGTAAAAAATGCCATCTTCTAGATCTAGTCCTTTAATTCTCCCCTAACGGGAAAAACTATTTTGACAAAATATAAAGAAAAGTTACAAAAAGAAAATATTCATTAAAAGAATCTTTATACAGCAAAAAGCCTTTTAAAATTAAGAATCGAAACTAATTGACTGTAGAGGTAGTGAATATTATAAAAACTGCACCAGCATTAATATATTGATATAGACTATAAAGTACAAGGAATTTAGGAAAAGAAATATTGGCTCAACCATATTGGCAATCAAAAATTTGGGGACTTCTCCATGACCCCATTTTAAAACCACTACACAACAACACAGGTAGAGGGTTAAACAGTTTTTGGCAAGAGTTAGGAGTAATGAATGATTGGGTAGAAAATAAGCTAAACCCAGAAGAATCCTCAAAAAAAATAATGAAACATATCAAATTAGCCGACTTCCTCACGTCTGCTAGTGACCGGGGTGCGGTGGGTTCTGTCACTCA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCCTTTAATAGGGGAAACTACTTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 66222-68208 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWHC01000033.1 Cyanobacterium sp. IPPAS B-1200 NODE_12_length_80222_cov_22.1204_ID_17377, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================================== ================== 66222 36 100.0 44 .................................... CAAAATGGACAGAGCTATGGGGAAAAAAATATGAACTGGTTAAA 66302 36 100.0 45 .................................... AAAAGGTATAGATACTATTAATACTTTTAGCTCATCATCAGTATC 66383 36 100.0 43 .................................... CTAGCATTCCAGGAAACCTTATGTATAGTAGAGAAGAAATCTT 66462 36 100.0 45 .................................... TCTACTTCCGAGAGGGTTAATATGAAAACCTATAAGATACCTATT 66543 36 100.0 43 .................................... TGTATGTAAAAGTACTTCATACTCTTCATCATGCTTATTTTTT 66622 36 100.0 41 .................................... TAATACAGGAAAGCCCATATCTTCGTTTAAACGCTGTTTGA 66699 36 100.0 44 .................................... CTAGTAAGGGGTGACCAACTCAACAAATATTGACAATAAAATGG 66779 36 100.0 52 .................................... AAATTACCACGGCGATCTCTCATGGCAGCCCTCAATTTTACCTCACGTTTAG 66867 36 100.0 40 .................................... TTTTACTTATAAAACGAGGATTTTTTTTCTTATGTACATA 66943 36 100.0 35 .................................... CCCTATGAATTGTTCGAGATCATGTTCCCTGTAGA 67014 36 100.0 35 .................................... ATGCTGGAAAAACAATCAACGGCACTAGCATAAAA 67085 36 100.0 42 .................................... GTCACGGCTTCTGGTCAACCAACGATTCAGTCCATTGATACT 67163 36 100.0 45 .................................... CGATTATGAGCGATGACGGCTCTCCTGTCACCCATACTATAGTGG 67244 36 100.0 37 .................................... CACAAATCATCTCCCTTGATGTAATTCCCCCCTTCAG 67317 36 100.0 45 .................................... TTGACTTAAGAGGTATATTGAACTCTTCTTTTACTTTTCTGGTTG 67398 36 100.0 38 .................................... GTACTTCATCTTGATGTCCAGAAAAGTACATCTTCTGA 67472 36 100.0 39 .................................... AACTCTGGTATAGTTTGTAAAAGAGAGTTTTTTTGATGT 67547 36 100.0 41 .................................... CCTATAACGCAAGTATCTGTAAAGTCAAAAATTGACATTAA 67624 36 100.0 46 .................................... GTAAACTTTTTACAGTTTCTTAGTTCTTTGTATGCTCTAAAAGTGT 67706 36 91.7 42 ......T...G.A....................... CCAAAGCCTTGACATCGTCAGCTAGGGCTCCCATGTTGGCTT 67784 36 91.7 44 ......T...G.A....................... TAGAATGTCAGTGATTAACTGAGACTTGTTTTTAGTCTTCCATT 67864 36 91.7 36 ......T...G.A....................... CACCCCGTAAAAACAGGCACCCTTAATGATTTTCCG 67936 36 91.7 49 ......T...G.A....................... AACACGGTTTTAAGTCCAAAACTAGCTAGAATTTCTTGATATTCTTTAG 68021 36 91.7 40 ......T...G.A....................... TTAGATTAGGTTATTTAACACCTTTTATTTCTAACCATAA 68097 36 91.7 40 ......T...G.A....................... TAGAGTTAATTCTAGCTACTATTTTTCTTCTATCATCTTT 68173 36 97.2 0 ......T............................. | ========== ====== ====== ====== ==================================== ==================================================== ================== 26 36 98.0 42 CTCTCCCTTAATGGGGGAAACTACTTGAATGGAAAC # Left flank : CCTGTTATCGGTTATCAACCTTATTTGTTTAGATAAAAATAATGTTGTTTTACCTTGTTTGCTATGATATTACTGATAATAAAAGACGAACTAAAGTTGCAAACATTCTCGAAGGTTATGGCTCAAGGGTTCAATATAGTGTTTTTGAGTGTGTTCTGAACAGCCACCAATATAAAGAATTACGGCAAAAACTTCGGAAGATTTTTAGAGAAAAGGAGGATAGTTTAAGGTTTTATTGTATTTCTCGTCATACTTTTAAGCATATTGAGGTATGGGGAGTTAACTCAGATATTACTAAACCTTTCTCTTCTCTGATTATCTAGCGAGGGATAATCAAAATGCCCTCAAACGACCATTTCTCGTATTATCCCTCGGTGTATTACTACATAAGCGTTTCAAGAGTTTTTAATGAGCAAAAATAGTGATTATAGGGTATAATTTTGCTAACGTTCGCAAACCGCATCTGAAGCTATTGCTCCATAACGGTTCTAAAAACGGCT # Right flank : CACTGGACAAAATAGACGAGCGTAAAAAGCGATGACGAGTTCTAAAGCTCCTTGCGTGCGGATCACTGACCTGCTTTGCGCCCTTTGTTAGAAGTTTTGACTTGTCGAATCACACTATCCCATCATTGGAGATTAGATTTTGTTGCTGTACTCATGAGGTAATTTTATGAAAGAGAATGTTTTGTACCTAGAAAGAAAAGGAGATAACTTGTGGGTTGTTCCTTTTCACGATTTTATTGCAGAAAAAAGAGAGGAAACGGGGAGTGCTAATTATCGAGATTGGTTTCCTAAGGAATGGGATTGGATGACTATTTTTTATGAGGCATTAGAGTATGATTTTTGCGACGGGTATTCTTTAGTTGATACTGAACAGGAGCTGGGTTTTGCCGTTAGCACTTTAATAATTAGAGACTTAACTGATTATTCTTTGTGGTACGATGTAGGATACTTATGTCTAAATTTGTTGGAAGAAACTCTAATAAACAAAGAGAGGTATCCTC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCCCTTAATGGGGGAAACTACTTGAATGGAAAC # Alternate repeat : CTCTCCTTTAGTAGGGGAAACTACTTGAATGGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //