Array 1 8784-8480 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVEX01000023.1 Enterocloster aldenensis strain AF19-9LB AF19-9LB.Scaf23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 8783 33 100.0 35 ................................. ACTACATCGATTGGCATAGCCTGTGGCATCACACC 8715 33 100.0 36 ................................. CCCCAGGATAAGCAGGCAGGGTCACCTGACGATGGC 8646 33 100.0 34 ................................. CTCGATAACCGGATTGGCGGATATTCCGATGGTA 8579 33 97.0 33 ...........A..................... GTACAAGGCTTCCGATTCGCTGCTAGGCTAATG 8513 33 90.9 0 ............A.........C.T........ | A [8485] ========== ====== ====== ====== ================================= ==================================== ================== 5 33 97.6 35 GTCACAGCCTGCGAGGGCTGTGTGGATTGAAAT # Left flank : CTTGCCAGTAGGAAATATGGCTGCTCCTGCGAGCACCCGTGCTCCGGCTCTAAATACGGGAGAACCGTACATGTGGCAATGAAAGATAATCCACGGCTGTTCAACCTGCCGCCACGTGACAGTGATGCATGGAAACTTGAGTATAATGCAAGAACTTCTGCGGAACGCTCCAATAAACGTGAGAAACTAGACTTTAAACTAGAAGACGGCAGGCACCGCTCAACTAAGATGTGGTACTGCCGCCTCTATCACATCCTGATGTTACAACATCTGGATGCCTGGGATATGCCTTTTGAATCCGCCCTGAGAAAGTTGATTCTACAAGCAGCATAATCCTTAGATTATTATACACTATTTTCAAGGCATAGCGACAGTCATGTCTGTTTCTCGTACACTTTTTTCTGAATTTTATTCCATTATGGATAATATTTGCTTTTCAATGTTCAGTTGCCAGATTCTCTGGCATGATCAATCAAGATTCCGAGAGATCATAATATAAA # Right flank : ATTCCCGCTACCAGGATGCCCGGCAGGCAAAATCCGGTATCAGGGCAGCGAATGTGGGAAGTGGGGCGGAATAAGTATAGATGAAAGCTGGTATTCGCTTAGAACAATTGTAACAAACAGATATTAAAATAAAAGAACATGAAGTAAAATAAAAGGGCTGTCATTTCCCAAATTTTCCATTATAATTATATCTATAGGAGTCAGGTATTGTGATGGACAGGTAATCACAATCGGCAACTGCAGGCAGATTGTTCCAAAGGAGAGGGGAATATGGGAAGAACGAGACAATTGGCAGCCATATGGATGGCAACTGGATTGGCAGTAATCATGTGCGGTACAGCGGCGGCGGCTTCACGTACAGAGATTAACAGTGTATCCCTGTGGGTGGAATCTGATATTGAGGCAGGTGACAGTTCCAGTGATGTGGATGTGACCTCTGATTCCAGCAGATACACGGTGGATGATGTGGAAGTGACCAATGAGCCTAAGAATGAATGGGA # Questionable array : NO Score: 8.94 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAGCCTGCGAGGGCTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACAGTCTGCGAGGACTGTGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.50,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 11799-10691 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVEX01000023.1 Enterocloster aldenensis strain AF19-9LB AF19-9LB.Scaf23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 11798 33 100.0 35 ................................. ATGCATCTGGCTGACAAAATCAGGATGCAGTCGTA 11730 33 100.0 33 ................................. TTTCCATACAATGATAACAGTTGTGTACTTTTA 11664 33 100.0 34 ................................. ATCTTCAAACAATGCAACCGCAACGATTTCTGAA 11597 33 100.0 35 ................................. ACCAACATGTTGATGATGTTCCTTGTCACACCATG 11529 33 100.0 33 ................................. CTGTACATCCCAACACCCCCGTACCTAACCGAA 11463 33 100.0 34 ................................. CCCTTCACATCGGTGTATTTCCCGCTGTTAGGTT 11396 33 100.0 35 ................................. TTTGGGTATCCATATGGGATATATGCTGGCTCACC 11328 33 100.0 34 ................................. TATACTGCTCTGTCAGCGCCATCATCTGCTCCTG 11261 33 100.0 33 ................................. CACATAACAAACAGTTCCCAAAGTCCACTCTGC 11195 33 100.0 34 ................................. AGTTGATTTATTTCTTCACACTTTTCGATGTATA 11128 33 100.0 35 ................................. ATTTGTGTGTTTGACTTCCCCAATCAGTTCCACCA 11060 33 100.0 35 ................................. ATCCCACCCGGCATTCCTAAGTCCTAAGATTAATC 10992 33 100.0 34 ................................. TGTGTCGGCGGAGGCGGCGGAGGTGGAGGCGGTG 10925 33 100.0 35 ................................. AAAAACCGTAGTAGGCAAATAGTAGGCAAGATGCA 10857 33 100.0 35 ................................. TATATTAAGTCATGACCAGGGGAAAGTCAATAAAA 10789 33 100.0 33 ................................. CTGTAGAGCCGGAAAAACCAACACCGGGTTATA 10723 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 17 33 100.0 34 GTCACAGCCTGCGAGGGCTGTGTGGATTGAAAT # Left flank : CCTTTAGGGACATTAGGCGTATATCCATTTTGATACAGAGAATAAAATTTTGAAAATAGGGCGGGTTATATCTGATATGCAGTGCATGTGAAAAAGGAGGGTGAATTGGCGGGTATCATGGAGGATGTAACGGTTCCATAAAGAGAGATGGATTTGGAAATCATACTGGAGTGCAGACGCATAAAATAGACGGGAAGATGCTGGATTGGCTTTTATTTTGCGAAAAAGTTTTATATAATAATATACAGGATGGAGTTATTGTTTTATTGGGGATAGAAGAGTTGGGGCGTGCAGATGGCGGAAATGAATTTTCAAACATACCCTAGGGGCAAATGATGGTGCGGATCATGAGCACACATAAAATTCCTAGGGGATTCGCACCTAAAAAGCAGGGTGGAAGTCAGGGGAGCCTTCTTGGAACTAGAGTTTGTTAATTAAATATATATGCATTGTATATGATTATGTCTGTTAGAATGTGGTTTTTGTTGGGTATTATTGCT # Right flank : TGCCATAGTATCAACCTCCTAATATAATAATAGTCTCTCGGAATCTCTAAGCCAGTAAAATCAAGGCTTTCAGACTCCTTTTTTATTAAAATCCCCCACTTTTTTTGCCAAAACACTTGACAAATCCATCGAAAAATGCGGTGCTTCGCACCCTTCATCAAACGTACATTTTTCGATTGGAGGCGATTTTTATGTTACCTGTTAACTCTGGCGGCCATACCGCCTATCAAGACTTTCTTCTTGATAATCTTCGTAAATATTATCCTGTACCTGACTCTATTTCTCCTTCTACCTGGGATATCATTGATCGTTTTTGGAATCTTGACCTTTCCTTCACGGATGAATTCATGCGGGACAAATACTCTGTCTTCGGCCCTAAGCCAAGAACCCCTTCCTGTATGCAGCGTTCCTTCCTGCTGTCTATTGATTTCAAGGTTTCCTCACTCACAGATTGGGTTGCACAGCTTAAGATCAATCCACTTTATGCCATACTCAGTGGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAGCCTGCGAGGGCTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACAGTCTGCGAGGACTGTGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.50,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 78359-79606 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVEX01000013.1 Enterocloster aldenensis strain AF19-9LB AF19-9LB.Scaf13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 78359 33 100.0 35 ................................. ATTGGAGCTGGGGTACTGGCTGGAGCAGCTGCCTG 78427 33 100.0 33 ................................. ATCTGGGCAATACCGGGGACCCGGTCCGCAACT 78493 33 100.0 35 ................................. AGTTACAGGAAATACATTACAGAATGCCGCTAATT 78561 33 100.0 33 ................................. GATTAGCAGTACCCCAGCCAGTATAACGTTGTA 78627 33 100.0 34 ................................. CCGGCCAGAGGTAACGGTCATCTTCCTCGCCTCT 78694 33 100.0 35 ................................. ACACGGTCCGACATTATGGTGTTATAGGCATCAAT 78762 33 100.0 36 ................................. GCATTGGAATACATGGAAAAGGTGAGGTACCAGGAA 78831 33 100.0 36 ................................. GTGAGGAGTTTTGGGTCTGTCCCCACCAGGAAGGCC 78900 33 100.0 35 ................................. GAGAAAGGGTTGGAAGCGGATGGAGATACGGGAAT 78968 33 100.0 33 ................................. ACCAAAAAAGGTTATTTCTGCCCTTCCTTCCTC 79034 33 100.0 35 ................................. CTTTTGCCTTATACATGGTCTTGTTTTCAGGAGCT 79102 33 100.0 34 ................................. ATCGCAACCATTTCCTAAGGAGGGATGCCATGGA 79169 33 100.0 34 ................................. ATATGACACCAGCGTTGATTATCTGATAGGACGG 79236 33 100.0 35 ................................. ATTGATACCTACGAATTTTCCAGCACAGATACAAT 79304 33 100.0 34 ................................. TAACAAGGACAAATCAGCCTCCGTCTGGATGTAT 79371 33 100.0 34 ................................. AACGAATAGTTAGCAGGGGTGAGGTTTCCCATCC 79438 33 100.0 36 ................................. GCTGAAAAACGTTGCAAGGCTGTAATGGAACGTAAG 79507 33 97.0 34 ......T.......................... ATATCTGTCACCTCAAACACGCCTCCATTTCGAT 79574 33 75.8 0 ......T.......A......AC.C...G..GT | ========== ====== ====== ====== ================================= ==================================== ================== 19 33 98.6 35 GTCTCCCTTCGTGAGAAGGGAGTGGATTTAAAC # Left flank : ATGAATATCCTCCGTTTTTTTGGAAGTAGGTGATGGGATGCTTGTGTTAATCACATATGATGTGAAAACAGAAACAGCGGCTGGAAGGAAACGTCTCCGGCAGGTGGCTAAACAATGTGTCAATTATGGCCAACGGGTGCAGAATTCAGTCTTTGAATGTAATATGGATGCAGCAAAATGCAGGGAAGTAAAAGCTATCCTGGAAAAAATCATAGATAAGGATGTGGATAGTTTGAGATTTTATTATTTGGGTGACAAGTATAAAAATAAAGTGGAGCATATGGGGGCAAAGCCAGGATTTGATGTAACAGAACCGTTAATTATGTAGTGCGAATGTGATGCTCTCATAAAATCCCTGGGGGATTCGCACCGGATTATGGGGGGATTATGGGATCAGGTTAAAAGGTTTGATTGTTTGGAGTGAAGATTTGAGAGGTTTGTGAAAGAAAATATTGGATAATATGGACAAAAAGCATTATGATTTTTTGTGAATATTTGCT # Right flank : TAAAAGTACATCTTAAAACAAGAGAAATCAAAAAAGCCTTCCTACAAAGAAAGAGTTGTAAGCCAACTGTATAACTTAAGTAAAAATGTATTGTCTTTATTGTTAAGAAAGAAAAAATCTATCCCAGCTACTCATGCTTGAAGAATGGGGGGGGGGGGGGATACAGAAGCGGATGTGCTTATGAAATTCATAAACAAAAGGGATTATAACGGCGAAATTGGGCTGTTAAATGCTGGATACGGTAAGAGACTGAATCTGATTTTAACGGGAAAATACAGATGAGAAGTTTGGGACTTTTCTGATGTAGATGTTCAGCCTTGCTGTTGCTGCCTAAGTTGAATCCATTCCCAATAGTACTACCAATGACAACCTTATCAATTCTACACCGCCATATTACTAAAAATTGAAGGTTCCTCCATATTTGAATATGCAGTGGATTTTTTATCGTGGCAGGAAAGTAATATCCTTTTGGTTTCAGTAACTTCCTGTTTAGCATCTAA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCTTCGTGAGAAGGGAGTGGATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.80,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //