Array 1 17286-15524 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACYYD010000011.1 Deinococcus sp. 6YEL10 11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================= ================== 17285 29 100.0 32 ............................. CACTCGCGATTCACACCCTGGCCGCCACCATG 17224 29 100.0 32 ............................. GACTACGACACCGAGCTGGCGAACCTCGAAAA 17163 29 100.0 32 ............................. AAGTCCGGTTGGGGTGATTACCGTACATTCTG 17102 29 100.0 32 ............................. CAGAGGAAATCCGCGACGTACCGGGTGCCGCC 17041 29 100.0 32 ............................. CCCTTGCTGGCCCCCGCCCGTGCCACTGCGCC 16980 29 100.0 32 ............................. GCCTCGCACAAGTTCGGCGCGGTCAGGACCGA 16919 29 100.0 32 ............................. AGCTGCTAGGACTGGCGAACGAGGCCATGCCC 16858 29 96.6 32 ............................T TGCGCAACTGCAGCGTCAGCGTCCTGCCCGAC 16797 29 100.0 32 ............................. GTAGCCGACGCGTTTAAGGAGTTCGGGCTGAC 16736 29 100.0 32 ............................. ACCTGATCCGTGATTACGTCCAACTTGGAATG 16675 29 100.0 32 ............................. CAGGAGGTCGGCATCGGCACCGCGCCCACCGA 16614 29 100.0 32 ............................. CGGCTGTCGGCCTCGCCATGTTCTACGGCTCG 16553 29 100.0 32 ............................. ACCATTCCTGTCAAATGCACGGCTGGGTATAA 16492 29 100.0 32 ............................. CCGCGCCCGGTCGCCGGATCTACTGTTTTGGA 16431 29 100.0 32 ............................. AGGTATTGAATGACGCTCTCAGAGATGACGCG 16370 29 96.6 32 ..........A.................. TCCGACACGAACGCCCGCGCCCTACAGGCCGT 16309 29 100.0 32 ............................. TTCACGCGGGCGCAACCCTACGCCGCCGCCTG 16248 29 100.0 32 ............................. TCCGCCGCGACCTGCGCCCGCTGTGGCCGCAA 16187 29 100.0 32 ............................. ATAGCAGCGTGATCCTGATGCAGAGCGGTGAT 16126 29 100.0 32 ............................. TCGCTGCAGAAACGGTGGCTGACGCTGCGGCC 16065 29 100.0 32 ............................. TTCTCACTGGCGAGTTGCGCGAGTTTCTTTTT 16004 29 100.0 32 ............................. GCCGCCAACGCGACGCACGAGACCCACCTGCG 15943 29 100.0 32 ............................. CCCCAGCGGCCCGCCCGGAGCCTCATCCGGGC 15882 29 100.0 32 ............................. TGCTGCGCCTCTGCGTGGCATTGGCGGGTCAG 15821 29 96.6 32 ..T.......................... CCCTCGCGGCCCTCACCCCCGAGCGCATCCTG 15760 29 96.6 32 ..T.......................... CAGGTTATCCCGGACGTACTGCGCCGCCCGCC 15699 29 100.0 32 ............................. TTGGAGCCGTATGGAAATGCCATGTACGGCGT 15638 29 100.0 57 ............................. GATCGCCAGCAGGCGGCGCGTGTAGGCGTGCGGAGTTCCCCACATCGCGCAGGGCCT 15552 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ========================================================= ================== 29 29 99.5 33 GAGTTCCCCACGCCTGTGGGGATGGCCCG # Left flank : CCACCACCTCCTCGGCGGCGACCAGAACGACCCCGAACCCACCGCCCCCGGCGACCTCTGGGACCCCGAAGGCGACGTCCAGGGCGGTATCAACCACGCATGATCGTCATGACCCTCGAAGCCGTCCCACCCAGCCTGCGCGGCGAACTCAGCCGCTGGCTGATCGAAGTGCAACCCGGCGTGTACGTCGGCAACACCACCGCCCTCGTCCGCGACCTCCTCTGGGATAAGGTCGTGCAGTACGCGCGCACCGGCCGCTGCACCCAGCTGTACCGCGCGAATAACGAACAGGGCTTCGCCATCCGCCTGCACGGCGACCCGCGCCGCACCCTCGTCAGCTTAGACGGCTTCCAGCTGGTTGCCGTTCGCAACGCCCGTCATGCAGAATTGCAGGGGGAATACGACCCTCCCGAGGACGATGACAAACTGTAAGCTGAATCCGACCCCCGCGAAGAGACCTCCCGGGGTCACGCACCCGTTCCACCTCGTGTTCCTAAAGT # Right flank : TGAACCCGGCAGACACCCCCCAGAATAACGGGTCGAGGTGCGGTATGCCGTCAGCAGCCGGCTGCTGACGGCTCAAGAAGCGGAGCGCATCTGGCGCGGTCACTGGGGCATAGAGAATCGAAGCCACCATTGCCGGGATGCCGTGCTGCACGAGGATGCGTGTCGATTGCGCAAAGGAGCACAGGGACGGGCGATGCTCAATGGCGTGATTGTTGCGCTGCTCAGTGGAAGAACTCGTCAGATCACAGCGCTGGTGCGCCGCCTGACCATTGATCCGTTGCTCGCTCTCCGACTCCTTATTCCTGAACTCGCGTCAAGATAAAAGCATGCCTGGCTCGACACCCTCGACGACCGCGCCCAGAAGGACATGCAGAGGCGTGGCTTAACTGCATGCCCCACAGTGTCCGCAGGGCCATGAACCTTCCGGACTGCCGTGAGTGCGCCGCTGCCAGGCAACTGCCGACGCGTGTCCCTGGCAGCGGCCGCTCAAGCGAAGTGCC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCACGCCTGTGGGGATGGCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTAGTCCCCACGCATGTGGGGATGGCCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 29822-33693 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACYYD010000011.1 Deinococcus sp. 6YEL10 11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 29822 29 100.0 32 ............................. ATCGCTGCGCCGATTCTCGTCCTGTCAGCCTG 29883 29 100.0 32 ............................. ACAGCCGGACGCGCGACGAACACGCGGCGATC 29944 29 100.0 32 ............................. TTGCCCGGCCCGTGATTGACGGCGATGTCGTA 30005 29 100.0 32 ............................. TTGATTTAATGGGAACGCCTGTAAAGATGGGT 30066 29 100.0 32 ............................. CTCGCCGCATATCCCCCGATGGTCACGCAGAT 30127 29 100.0 32 ............................. GAAGCCGCGAGGTATTGAACAACCGTAATAGC 30188 29 100.0 32 ............................. GGCTACAGCATCCCGGACCTGCACAAGAGATT 30249 29 100.0 32 ............................. CATTCTGTTCTGTTGCGTAATCGATCCATTCC 30310 29 100.0 32 ............................. GGGGTGTTATTATGCTAGAGCTAACTGTGTAT 30371 29 100.0 32 ............................. ACCGGTCAGAATCAAGGAAACGCCCCCGGAAA 30432 29 100.0 32 ............................. CTGGCGGCAGCGGTGAGTCAGACCCTGAGTGG 30493 29 100.0 32 ............................. CCGAGGCCGACTACCACGACCTGCTACAGCTG 30554 29 100.0 32 ............................. CCGAGCCCCCGCCACTGCGCGGGGGTTTCTGC 30615 29 100.0 32 ............................. CCATGTGCCTCTGGGGCAAACCCACCCAGTAC 30676 29 100.0 32 ............................. CCCTGGGAACAGTCGCTCAGCATGGACGACTG 30737 29 100.0 32 ............................. GCCCCCAAGACCACCGCCGCCGCCCGCTGCGC 30798 29 100.0 32 ............................. AAACCGCCCGGCAGATGAACCTCTGGTACGAA 30859 29 100.0 32 ............................. CTCCTCCACCTCCAACGCGAGAATCGCGAAAA 30920 29 100.0 32 ............................. CCATGCCTGACACTGCCCGCATGTCCCGCATC 30981 29 100.0 32 ............................. GTCTTCCTGTCTCATCGCTCTCCTTCCTATCA 31042 29 100.0 32 ............................. GAGAACGCCATGCCTGGAACCCGCGCCGACCG 31103 29 100.0 32 ............................. ACATTCCGCTGGGACTCACCGCCACCCGACGG 31164 29 100.0 32 ............................. CCATCAGCACGCCGTTGATGTACATTTCGCTC 31225 29 100.0 32 ............................. ATCATGGGACAGCTGATCAGCGCCGTCGCTGC 31286 29 100.0 32 ............................. CCGCGCCAGGTCGCCAGACGAACCTTTACGGA 31347 29 100.0 32 ............................. CATGAATTCATTAGTAGATATGTGGCAGTTCT 31408 29 100.0 32 ............................. GCCTCGTGACGGCTGCATTCAACGTCAGGCCC 31469 29 100.0 32 ............................. GCCTCGTGACGGCTGCATTCAACGTCAGGCCC 31530 29 100.0 32 ............................. CCATGCCTGACACTGCCCGCATGTCCCGCATC 31591 29 100.0 32 ............................. CCGTCAAACGGTGGGGCATCAGCGAGGCGACG 31652 29 100.0 32 ............................. GCATCCCGGCTGGCGGCCGTGGCCCCCGTGGT 31713 29 100.0 32 ............................. TTCCTTGGCCTCCTCGTTGAACCTATTTTTGG 31774 29 100.0 32 ............................. CTGGGCCTGGATAGCCTCAGCGTCCAGGCGCA 31835 29 100.0 32 ............................. TGTTGTTTTTGTTAACTCTGCTACTTCTCGCG 31896 29 100.0 32 ............................. GCGATCAGCCTGACCGAAGACAGTTACGGCCT 31957 29 100.0 32 ............................. CGGGTCCACCGCGTCAAACGTGATAACGTACA 32018 29 100.0 32 ............................. TCGAAGATGGCCCCTTCTGCCGCCACCCACAA 32079 29 100.0 32 ............................. CTCCCGCAGGTCATGGCCGGGTGGATTGGCGA 32140 29 100.0 32 ............................. CAATTCGGCGGGCGGTGCATGAAACCCGACGT 32201 29 100.0 32 ............................. TCAGCTTACCAGAGGCTGCGAACGCGGTTCCA 32262 29 100.0 32 ............................. CACAGCAGGTGGACCCCGGACACGAACAGGAG 32323 29 100.0 32 ............................. GGGAGAGGATGATTACCACGGACCTGATTCAG 32384 29 100.0 32 ............................. ATCGGGCGTCTGATTATCGTGAAACGTGCCTC 32445 29 100.0 32 ............................. ACCCTCCAGTACCGCAGTGCCCGTGAACACAA 32506 29 100.0 32 ............................. CCCCTGTTAGCCCCTGCCCGTGCCACTGCGCC 32567 29 100.0 32 ............................. GTGTACAAGCGCCAGCAGGTCGTGCGCGTCGG 32628 29 100.0 32 ............................. GTGTGGTGCTTAGGAACCACAGCGCAGTACAC 32689 29 100.0 32 ............................. GTTGCTGAGCAGTTGCGACGTGAGTGGTTCGT 32750 29 100.0 32 ............................. GCGGGCCCCGGAAACGTCCGGGCCATGAGTAC 32811 29 100.0 32 ............................. AATTCCAGCGTCAGGCGCGACAGCAGGCCCGT 32872 29 100.0 32 ............................. AAATTCGGCAGTGATCGGAAACTCCCGAAACA 32933 29 100.0 32 ............................. CGCAGGGCCACCAGCAGGACCAGCACGGACAC 32994 29 100.0 32 ............................. GAAACCCCCGCGTCCGTCTCCGCAGCAACAAC 33055 29 100.0 32 ............................. GTCATGCTCCAACGCCTGACCGCAGGAATGCC 33116 29 100.0 32 ............................. GGCTTCAGGGCGTCTGCGAGTGCTTGTACGTT 33177 29 100.0 32 ............................. TGGCCCGGCACGGCCTCCGGGATCGTCACGTC 33238 29 100.0 32 ............................. CCGCTGCCCTGCGCCGGGTCTTACTCGCCTTC 33299 29 100.0 32 ............................. GGGAGCCGGAAGCCGTGCGGGGCATGGCGTGA 33360 29 100.0 32 ............................. CGTAGCAAAAACGGGGCCGGAACGAAACCGAC 33421 29 100.0 32 ............................. TCGCGTTTCGCCCGAAATGGGACGCCTCTGAA 33482 29 100.0 32 ............................. GCCGAGGCGGCGAGACGCGCCATGGAATCCAT 33543 29 100.0 32 ............................. ACCGAACGGGACGCCGTGACGCGGGCGGCAGA 33604 29 100.0 32 ............................. GCGCCACTAAGACGACGAAGGGGAAAGGGCGC 33665 29 96.6 0 .............G............... | ========== ====== ====== ====== ============================= ================================ ================== 64 29 99.9 32 GAGTTCCCCACGCCTGTGGGGATGGCCCG # Left flank : CACGAACGCCGCGACGGACGACCTTGCCGCCGAGACGCCCCACTTCGGCACCCGCCTGGGCGACGACAGCCTCCGCATCGTCCCCATTCACCGCAACGGCGCCGACTACCTCGACCCGAAAGGCCAGACCGCCGCGCAGATCACCACCCTCCAGAAAAACGACTGGGACACCGCCCGCGCCATCTACCGCCGCAGCCTCCAGGTGTCGCGCCATGACCTCGTCAGGCACTACCGCGACCACCCCATCCGCCGGGGCGGAGATCACGCCGGTTGGGCTGCCCACCCACTCCTGCGAGACGCCGAACCCCTCATCCTGACCGGCAATCAGACGGTCATCGGCAAGACCCGCGTGGCCCTCGACCCCGAACTCGGCCTCACCTACGAACGCATAGAATGACCGCAGGCACCCGCCCACGCCGCATGAAAATGTAAGCTGAGACTGAGGGCAGAGAGGAGACCTCCCGCCCCCCTTACTCCCCCGGAGTGCGTGTTCCTGAAGT # Right flank : GCAGCGGGAGCGGCTGACTCGTTCCCGCGCCGTCCGCCTTGACGGGCGTGGCGATCACGGTCAGCCGGGTGCCTTCCATCTTGATGACCGAGCGGGTCTCCTCCTTGACCTGACCGGCCCGGTTCGTGAACCGGTTGTTCATGGCGATGTCCAGGTCCGCGACGGCGTCACCGGCGGGCGTGTACCGCAGTTCCACGTCGCGCGTGAGGTTCCCGCCCGCCGTGCCGACGACCGTGCCGCCATCGAGGCGCCAGCCGCCCTTGGCGTCCTGGCTGAAGGTCAGGTTGGCGCTGTCGGCCATCTCGGCGTGCAGCACCTTCACCTTGAGGCGGCTCAGTTCCGAGTCGTCCTGCGTCCACACCTCGCGGTGCAGCACGCCGTCGAGGATCAGGGCGACCGGGGCGTTGCCGGCGGCGACGATGCGCTCGTGGAGGTTCTTCGCGGCGGGGCCGATCAGGCCGACGGGCAGGTAGGAGATGAGGTCGCTGCCGTTGTCGCGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCACGCCTGTGGGGATGGCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTAGTCCCCACGCATGTGGGGATGGCCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 42273-38389 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACYYD010000003.1 Deinococcus sp. 6YEL10 3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 42272 37 100.0 34 ..................................... TGTGTGGCCCGTTGCTTGAGGGTCGTGGGCCGGG 42201 37 100.0 35 ..................................... TACGCCGAAACGGACAGGCAGACGCGCAGGTGGAC 42129 37 100.0 33 ..................................... AGGCTCATCACGGTGCCGGGCCTGATCTGCCGG 42059 37 100.0 33 ..................................... CTGTGTGCCGCGCAGCCACGTGCAGAGCCGCAC 41989 37 100.0 35 ..................................... GCGCGCAGGTGCCCGCATGACCGCCACCGACCCGT 41917 37 100.0 35 ..................................... TTTGCGGGTGGGTGCCCGCTCAGGCGGGTTTGGCG 41845 37 100.0 35 ..................................... CCCACTCCGCAGACGCGCCGCGCCTGCTCTCGCGC 41773 37 100.0 35 ..................................... ACAGCGGGTACTCGAACATCGCCATGCCGTCCGGG 41701 37 100.0 34 ..................................... TCGGTGATGCGAGTGGCGGTCACGCCGCCACCCC 41630 37 100.0 34 ..................................... CCGGCGCCGTGGAAGTGCGCGGCAACATGACGGC 41559 37 100.0 34 ..................................... TCTGGGAAGACACGGTGGTGCCGCTGCTCGACGA 41488 37 100.0 34 ..................................... GGGTGTGACGGTAGATTTCAGCGAGTACGACGCG 41417 37 100.0 33 ..................................... AGTAGGGCCCCACGGGGATAGTCCCGCCGCCCA 41347 37 100.0 35 ..................................... CTGACGGCCAAACTCACTACCACGCGGGGACTGCT 41275 37 100.0 33 ..................................... TGGTTCACTTGCACCTCGTGCCCAGGACTGTAG 41205 37 100.0 34 ..................................... CGCTGGGGTTGCGCGTCGAGAGTGGGGCATCCCC 41134 37 100.0 35 ..................................... CACGCCAGGGGTACCGCGGTCGACGTTTTCCCGGA 41062 37 100.0 36 ..................................... GCTGCCCCTGCTGTGCGTGAACCGCGCGCCGGCAGG 40989 37 100.0 36 ..................................... CCGAATGTGGTGAGGGGTTTGCCCTCGCGCCGCTGC 40916 37 100.0 33 ..................................... TGAAGATAGGCATCCTGTACACGAGAAAATCAA 40846 37 100.0 33 ..................................... ATGATTCCCGGCGCTATCTCGCACCCGTGGGAG 40776 37 100.0 32 ..................................... CGCCGCACTCTCTGAGTTGATCGTCTGCCGTG 40707 37 100.0 34 ..................................... CCTGCATTCGTCCACGATCCGCTCTGCCAGTCGG 40636 37 100.0 33 ..................................... CTGAGCCGCTGGATGAACCAGCATGCGCGGGAG 40566 37 100.0 34 ..................................... CGCACCAGGAGGGCGAGGTCACGGCGGATGGTGG 40495 37 100.0 34 ..................................... TTTACCCGTTCCGCGCTCTGCGGAGGGCGTCATG 40424 37 100.0 33 ..................................... TTCGGGATGCCTGCCCGTGGGCGGTTGAGAGCC 40354 37 100.0 35 ..................................... CCGAGTTGAAAGGCGCACCCGCGAACGTGGGCGGC 40282 37 100.0 35 ..................................... CAGTACACGTTTTCAGGGGTCGCGGTGATGAACGC 40210 37 100.0 35 ..................................... CCGATGTCGGCCAGGATGCCGGGCACCAGCACGGC 40138 37 100.0 34 ..................................... TGCCACGTAGCGCCGTCACGCAGCGCCTCAATGC 40067 37 100.0 34 ..................................... GCATCGGCGGTCAGGCCCGCCACGGTGCCGAGGC 39996 37 100.0 35 ..................................... GAACGACCCTGAGTGGGATGAGCGACACCCTGCTG 39924 37 100.0 35 ..................................... CCGAGGGTGACGGGCGCGGCGTTCCCTTAGCCGAG 39852 37 100.0 34 ..................................... TTGACGGCCTCAAGGGACTGGAAGTGCAGGCCCG 39781 37 100.0 35 ..................................... CTGCGTCCGGCCAGAATTGCTCTCCGCTGGCGCTG 39709 37 100.0 34 ..................................... CGCCATGTGTTCGTGCGGTACAGGTTGTTCTGCG 39638 37 100.0 35 ..................................... AATGACAAGGGCGAGGTGACCGCCACGACTGCCGA 39566 37 100.0 34 ..................................... CGCCGCAGCTTCACAAGCCGGGTGCGCCGCGACT 39495 37 100.0 34 ..................................... GCCTGTGCCAGTCCAGTCCCTCACGGCCTAGCAG 39424 37 100.0 35 ..................................... ACGACGGGAGCCGGGAACACGCGCAGGAACGCGGC 39352 37 100.0 34 ..................................... CCGTTACCACACGAGAAAAACACGTTGTCGCTGA 39281 37 100.0 33 ..................................... TCAGAGGTACAACTTGATCCACTCTGAATCAAA 39211 37 100.0 35 ..................................... TTGGTGCTTTCTCCAATCGGAACGTGATGAGCGTG 39139 37 100.0 35 ..................................... CGGAGCGAGATCAGGAACTGCGTCAGGGTCACGTT 39067 37 100.0 34 ..................................... CAGAATTTGCTGCCGGGCTTGTCGTACGCCTCGT 38996 37 100.0 34 ..................................... ATCGCCATGATGATCTGCGCGTCGGTTTCATAGC 38925 37 100.0 35 ..................................... CACGCCGCAGAATCAAGCGCAAGTGACTCCAACAC 38853 37 100.0 34 ..................................... CTCATGGTGCCTCCGTGCCCGGATGAGGCTCCGG 38782 37 100.0 34 ..................................... GTTTGACCGCCTGCGCGGCCTGCGCGTACCGTTC 38711 37 100.0 35 ..................................... CGACACACCACGCCCAGCCCCGCCACCATGCCCGC 38639 37 100.0 34 ..................................... AGCGGCAGCGAAGGCGTGTAGGCGGTTGACCTGC 38568 37 100.0 35 ..................................... ATAGGTGGCGTAGTTGTCTCTGCCGGTTAGTTGGA 38496 37 100.0 34 ..................................... CGTATAGAGTCAAGCTATACGGGCAATCATTAAG 38425 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 55 37 100.0 34 GATTCGGCCTGCCTTCGGGTGGGCCGTGGATTGAAAC # Left flank : CGCGCCCACTACCCGCCGTACCTGCACCGATGATTGACCTGCTCGTCTGCTACGACGTCGCCACAATCACCGAGGGCGGCCGGCGACGGTTGCGCCGCGTGGCGAAAGTCTGCGTCGCGCATGGACAACGTGTGCAGAACAGCGTGTTCGAGGTGAGCGTGACCGACACGCAACTGCTGACATTGAGGGAGAAACTGCTGAACATCCTGGATCCGACGGAGGACAGCATTCGCATCTACCGGCTGCGGCAACCGCGCGACAGCTTCGTGGAAGCACATGGTCGGGACCGGTACGTGAACTTCCACGATCCCCTGATCCTGTAAGCGCGAACCCCCGGCACACACGAAAACCTCGGGGGGTTCGTGCCGAGAGAAAAGTCCGTTCAGGACGCGATTCATGAAAGCAGAACATCAAGACCAGTCCGCGCGAATGGACTTTCGGGAGGGGTTCGCGCAAACTGAAGTGGGGACACTGTCTGGGATGCATCCCGGCGGCAACCA # Right flank : CAGGCGTTTCCTCTTATCGTGGTGGCTTTCGTGTGATTCGGCCTGCCTTGCCGTCAGGCGGGCGTGGGTCGCCGCGCGGCGTCCCCGAAGGCCAGATCCGCATTGATTGCGGCGGCCGCGCGTGCGCCACTGGCGGCGGCTAGGACGACCTGCTGCTCGCCGATCATGTCCCCGGCGGCGTACACGCCCGGCACGCTGGTCAGCCCGATCTCCGGCGTGACCTTCAGCAGGACGCCCGCCAGCGGGCCGGTTTCGATGCGGGCGCAGCCGAGTTGCTCGGGAATCGTGGAGCGTTGTGCCTGCCCGGGCGTCACGAACAGCGCGTGGCGTTCCAGCGGCTGGCCGTCATCGAAGGTGACGTGCCGGCCGTCCCAGCTGGTGACGGGCTGCTCGTCGATGCGGACGCCCAGGTGCACGAGGTTCGCGCGCTGGTCGGCGCTGAGGTGGTCGGGGCCGTGTGTGAGGAGGGTCAGGTGCGGTGTCCACTGCCGCAGCAGGAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTCGGCCTGCCTTCGGGTGGGCCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.80,-15.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : NA //