Array 1 32885-33709 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWJM01000078.1 Staphylococcus warneri strain RE1.51 RE1.51_contig_65, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================= ================== 32885 33 100.0 33 ................................. AACAATCTACTTCAGTACTTGTAAAACGTCTTA 32951 33 100.0 33 ................................. AACAAAAGGAGTGAGAAATTATGAAAGAAAGAT 33017 33 100.0 33 ................................. AACATAACTTAATATTAGCTTGATAGTTGAGGC 33083 33 100.0 33 ................................. AACAGTGAAAGGTGCAGTTTGACAAACGACCGG 33149 33 100.0 33 ................................. AACACCTGTAACTGTGTCTCTACCAATAGGAAT 33215 33 100.0 33 ................................. AACCGTTAAGAATTAATAATAGCAACCAATTGG 33281 33 100.0 33 ................................. AACAGACCCGTGTATGGTATCTCTATGGACGTC 33347 33 100.0 33 ................................. AACAAACTGAGTGGCATGGACGACGAAGGTACC 33413 33 100.0 33 ................................. AACTATAAATTATGTGATCGAATGGATAAGAGA 33479 33 100.0 32 ................................. AACATATCAAATGCTTAACTTAGGTAAATATC 33544 33 100.0 33 ................................. AACTCCTGCATACGAAAATACTTCAATCAGTGC 33610 33 100.0 33 ................................. AACGCTTTTTGAAAAATACAACTGAAGCTTTTA 33676 33 97.0 0 ................................G | A [33704] ========== ====== ====== ====== ================================= ================================= ================== 13 33 99.8 33 GTTTTAGTACTCTGTAATTTTAGGTATGAGTGA # Left flank : ACAATACGGTGGCAAGTTGCTATTAATATATTTGTATCCTGAAGCAAATTTAAGTCCAAAAGAACAAATACGTTTGAAAGAGTTAATAATATCACTTGGAATTGATATTATAGTATTAACAGGGTCATTGCATTTTTTAGCTGAGGATTGGAAGTATAATAACTATATTAGATGTGATAATCAAAAAATATCATCTGAATTATTAGATAATCTACTTTGGAATGCCCCATTAAATTTTGAAAGAAGTGAAATAGAGCAGAGTTTAAATCAATTTATATTAGCTTACCAGGATAAAATTGAAATAAAACCGATTATCTCTAATTATCAAATTGCTCAAATTATGTTATTTAGTTCAATTGATTTATATGTAGGAGTTTCATATATGCAACATTGCAATCATGAATTTATATTGAATATAGATGAGACGAAATTACCCTTAAGTATGGCTAAATATTTAGAACAGTTTGTTAAAGAAAATTAACTATAATTTTGCGCTAGAG # Right flank : GATTGGAGGATATTTATGAGTAGCATGAGGAAGCCGATTATAAAAAATATTAGTTATTCTAATGAAGAGCTAGTTAATTCATTAGGCGAGTGGCAACAGAGTGATGATTCCAAATTTTTACTCAGATATCCCACTGTCTATATTATAAATGATAAAAATAAGTCTGATCACTTTAATTTGTATGTTGGTGAAACAACGGATATCAAAAATAGAACTATTCAACATTTGAAAAATGATGTGAAGCTTAAAGACTATTGGAAATCATTTTACAGTTCTGATACGTCTTCAATGTATGTCATCGGACATCCGTTCTTTAATAAGTCTTTAACTTTAGATATTGAGAACAAGTTTATGCAGTATTTGTCTAGTGTAGATGCTGTGACTTCAATATTTAATAGTAGAACAAATCAGCAAAATGAATATTATACTTCTGAAAAATTAGATGAAATATTCACAAATATTTGGCAACAATTACATAAAGAGAATAGCAAACTTTTTCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATGAGTGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //