Array 1 276351-276498 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNRL01000002.1 Photobacterium sp. Alg240-V54, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 276351 28 100.0 32 ............................ ATGATTTAGCGTCACTACTTTTCAGTGAGAAC 276411 28 100.0 32 ............................ AAAAGTAAAAGCGTTAATTGAAGGCGCGGAAT 276471 28 89.3 0 ....................T.....TT | ========== ====== ====== ====== ============================ ================================ ================== 3 28 96.4 32 GTGACCTGCCGCGTAGGCAGCTGAGAAA # Left flank : TGAAATGATGGTGAGTGATAATATCTTTGCTATCTCTTGTGTTTGCATCGTACCTAATGATTTACCTGAAATAAGGTTTAAACGAAATCAAAATATAGCCAAATGTTTTTCTGGAGAAAAACGCAGACGGTTAGAACGTGCTAAACGTAGATCTAAAGAACGCGGGGAAATATTTGAACCTATTAATGATTATCAAAATCGAGAGGTTGGTATATTTCATCGTGTGTTTATGACCAGTAAACAATCAGGCCAACGGTATATTCTTCATATTCAAAAAGAACTCTCACAGGGTGCAACCGATACCTTTACTTCCTATGGTTTTGCAACCAATAAAGAGTATCAAGGTAGTGTTCCTGATTTATCCTCACAAGACCCTTTTTTATAGTTAAATTTTAAGTTCTATTAAATCAAATGGTTATATTTATTGGAGTAAAAAGAATAAATATAAGAAAGCTTTTCTAATTATATGAATAATCGATAGTTATCTTCTACACTTAACA # Right flank : TAGGCCAAGAAGTAAGCAATCGCATCAGGCTATATTAAACCTGCCGAAAAGGCAGAATTAGGAAATTATATCCCAGCATTTGCTGGGATATTTTTAATCGTATTCAAAAAGGTGTTCTTCAAGTTTATCTTCTAGTTCATGCACTTCCATCGCTTCTAATTTGGGCGCTATATTTTGATGCCCATTAAGATAATCAATGGCTATTGTTACGGGGTTGTTTTTTATTTGAGGTGATTATTTGTAAATTGTAATTCTCATTGAAGTAACCACCTTTACTTTATATAAAGATGGTTAACCAATATTGTTATTTACTAAAAGCTAGTTGTGCTTTTAATTTTTTCTCTAATCGATAGACTTTTTTGCGAACATCATCTTGATACTTTTTAATATCTCTTAGGTTCTTTGCATCATAGCCTGATATGTTTTCATGAAACTTCTCTGCAAGATTCAATAATTCCATTGATTTACCATACCATTCAAGAGAAACTTTAGGGTTAGTT # Questionable array : NO Score: 5.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACCTGCCGCGTAGGCAGCTGAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGAACTGCCGCATAGGCAGCTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 106388-107916 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNRL01000004.1 Photobacterium sp. Alg240-V54, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 106388 28 100.0 32 ............................ GTAATGAAGTGGCTCAATCACACACTCATAGC 106448 28 100.0 32 ............................ TAACACTTTTAAAGTGCTTTGTTCAGAAGGTT 106508 28 100.0 32 ............................ TACTTCTCAGGCTGCTATTGATATTGTTGATC 106568 28 100.0 32 ............................ ACATGGCAGCCCTTAAACAATGCTTTATATAT 106628 28 100.0 32 ............................ TATTTGATCTTGTGCGGTGGCATTAACACCAC 106688 28 100.0 32 ............................ AGCTAAGGCCCGCACGTTATACGGCAGTCATT 106748 28 100.0 32 ............................ AAACGCAACAACACACGCTATATGCCCGTGTC 106808 28 100.0 32 ............................ AGCATCAATATCTACACCGCTATCTAGTGATA 106868 28 100.0 32 ............................ TTCAGGGAACTGAGTGTCAGCTTCTTCATGCC 106928 28 100.0 32 ............................ TCGAATGTATAATAGCGGTCGAAAAATTCATA 106988 28 100.0 32 ............................ AAGTCGCTAGGATTCGGTGTAAAATCAACAAA 107048 28 100.0 32 ............................ TGTCTGCTCAGCCATATCATCTTGTGATATAC 107108 28 100.0 32 ............................ TCAGAGGATGCCGATTCACTTGGACTCGTGTC 107168 28 100.0 32 ............................ GATAATTGAACGTAATGATTTGATATTAATAG 107228 28 100.0 32 ............................ ACAAGAAGCCGAAGCAACTGGAGTCCTAAGAA 107288 28 100.0 32 ............................ GTCATCCGATGGTCAGTCAGTACAACTTACAA 107348 28 100.0 32 ............................ GATTGCTGAGCTGTCCAGTGACTCACAGTGCT 107408 28 100.0 32 ............................ GCTACTGCGATGCATGTAAACCTGCTCAACAT 107468 28 100.0 33 ............................ GTGTCGAAATTGGAGTACGCCTTCATGCTTGAG 107529 28 100.0 32 ............................ GTTCTGTGTTGCGTCGTCGTAGCCACGCTGAT 107589 28 100.0 32 ............................ TGGTTGGGAACAGAAATTCTCTGATACGCAAG 107649 28 100.0 32 ............................ GACCGCATCGACACCGTCGAAACCGTTTTTAT 107709 28 100.0 32 ............................ AAATGCAAACATGGTGTTACATGCTAAAGAGA 107769 28 100.0 32 ............................ ACCAATCACTGAAGCGGAACTGTAGATATGAT 107829 28 100.0 32 ............................ AATGCCGAATAAATCATATGCATCAATCCCCA 107889 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 26 28 100.0 32 GTGTCCCGCCACATAGGCGGCTTAGAAG # Left flank : GACTTTAAGGGTGAAAAAGGGTTAGAAGCCTTAGCTAATTGGCTGCAAGATCCTAAGAAAGCATTTAGTGATAAACCTTCGCAAAATAGTAATACCGAGTATTACAAAGGGGTTTTTGATGCCTCTAAATATGGTGTCAGTACACGATCACCAGTGCTTACACAACGTTATGATGGTGTGTTTGAACTGTACATAAAAAGTGATGTAGAAACTGAAAGATTGATTATGGATAAAATCAAACACAGTGGGCGTCATTATTTACGTGTAGGTAAGTTATGTTTAGCTGAATTAACGCAATTACCTGCTCGTATTCCTTCAAATTATTGGGAAACGGTTGAAGATGATGCAGCCAAGAAAGGTTAAGTGAAATACCCTTTTTTATTCTGTAGTTGTAACTTGTTGATTGTTAATGGTGTATTTGTTGCCCTTTAAAAAAAGGGTAAACAAGCATTATTTACACAACATTATGTTTTATAATGTTTTTATGGGTTTAATATCCT # Right flank : GTAAAGCTGGCGTAACACCGGCAGCATTACATGCTTCTTGTATTGTGTAGCCTTTATTTAGGACTAAATTAGCAGTATTGTGCTTGAATGCGACTGAATAAGTTGTTCGAGCTTTTTTCATTATGTACACCATTTTGATATTAAGAGTATTTTATCCTATTTAGGTGTACAAGTTCATTAAGCCACAACAACATACGTCGATAAGAAGGCAAAGTGTAGAAACTTTGCCTTTTTTATCTTAAGTTTATAGCTTTTTTATCTGAGCATTACTTTGTTTAAGTATGCGTTTAGGTGTTGTACCTTTAGGTAGACAGGGCACTGTGAACGCTTCGTTAATATTACCTGCTGATGGGAGTGGCAGCTTGTTGCCATCAGTATCCTTTTTAAATTGAGCTACTCGTTTTACACCTATCTTATTACCAGCTACTGGAATATCTAGGTGACGATTCCAACCTTTAAATATCGCAGATAGTTTACACAGGAGAGCATAAGATGTTGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTCCCGCCACATAGGCGGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.70,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 625350-623991 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNRL01000001.1 Photobacterium sp. Alg240-V54, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================== ================== 625349 28 100.0 32 ............................ ACAATAAGCTGATGAATTATGCCTGAATCGCT 625289 28 100.0 32 ............................ TTAAATAATGCTTGCTCGATTACATCAGCTTT 625229 28 100.0 32 ............................ ACTGGTTGCGCGATCTTTGTTTACTTCCGAGT 625169 28 100.0 32 ............................ ATTGGCAATTGCTATCTGGTTATTCTTTGCTA 625109 28 100.0 32 ............................ TTTGTTGCTGCCATTACCTTAGCTGCATACCT 625049 28 100.0 32 ............................ AAATGTTGCAAATCAACCAAATCAACCTGATA 624989 28 100.0 32 ............................ TGACTTTCTAAAAGCGATGGTAACGGCCAGTG 624929 28 100.0 32 ............................ TACAATGTAGCGAATACGTTGGTGCGGGATCA 624869 28 100.0 32 ............................ ACCAATTCAAAGGTGGTTGTGATGCCCGTGCA 624809 28 100.0 32 ............................ CAAATCGCATCACGCCATTGCTCTGGTTGCGC 624749 28 100.0 32 ............................ ACTGTCCAGATTATATCGTTAATCGTACTAAC 624689 28 100.0 32 ............................ TGTTTATCTAAAATACCTTGTAACTTTTCATT 624629 28 100.0 32 ............................ TTCTGCTACTTGAAACACTGTGAATCCCCAGT 624569 28 100.0 32 ............................ TCAATCCATAGCTTTAGATTCCACCACATTTC 624509 28 100.0 32 ............................ TGAATTATGTCCACTAGATTTACCATCACTTT 624449 28 100.0 32 ............................ TCAGAGGATGCCGATTCACTTGGACTCGTGTC 624389 28 100.0 43 ............................ GCGTGTCGTCAGCGTGTCGTCAGCGTGGCAGAGCCATCTTTGC 624318 28 100.0 32 ............................ TAAAATTCACGTGGGTATCGTGAAATATGGCG 624258 28 100.0 32 ............................ TATATCTGTTCCATCGATAACACCATCATCAT 624198 28 100.0 32 ............................ TCAACATCAGGAAATACAAACGCCGTCTTGCC 624138 28 100.0 32 ............................ CATAGGTGGCTTACCTCGGCTTGCCTTAAAAC 624078 28 100.0 32 ............................ TTTTTATGATTAGAACAACATACTAGAAAATT 624018 27 78.6 0 ...........T........-..G.TTG | A [623994] ========== ====== ====== ====== ============================ =========================================== ================== 23 28 99.1 33 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TAGCTTATTAAATGATCTTGAAGGTTTAGCGTGGTTAGAATCGTTGGGCGGTTGTTGTCGAGTCGGGGCTGTGATTGCAGTGCCAGAACAAGTTCAATACAGAAATATTTCAGCTAAAAAAAGCAATATGAGTAATGCAAAACTAAGACGATTGATCAAAAGAGGCAATCTTGATCAAGATGGAATTAAACGTTACAAAGTAAAAATGCTGAGCCAAGGTTTTGAGCAGCCCTATCTTGATTTGTTCAGTAGTTCAACGGGTCAAATATACCGTAAATTTTTTGATTTTAGTGATTTGATGAATGATCCCGTAGAAGGCGTATTTGATTCTTATGGCTTAAGTAAAACAGCCACCGTTCCATGGTTTTAACCAATAAAAATAGCTCTTTAAAAAATCAATTTAAATACAACAGGTTAGATGAAGTGTGATAAATATTGGTAAAAATTCAATTATTATCTTAATTGTTTGTTGTAACTTGATTTTTGATTTATATTTTATT # Right flank : TTATTGGCATACTATAAAATATAACTTTACGCTCAATTTGTTATTTTTATTAGAAAAGCCAAACTAAATACGATGCAATTATATTTTGCTGGTATAGATACATTATATTTTCAGTGGAAGATATTCCGTTGATAAGTCATATTATTCATATTGTTAAGAACTTTTCCGTAAACCATTGAAGGTTAAAACTTTGATGTTTATCATGGGTTAACAAAGGATTTGTAGCCGCTTGGAATGAAATTTGGACAAAGAAAAATTTAACAATATTGCGAATCATATTTTTAAGGCAGAAGCTGTAAAAGTTGCTGTTTATGACGTGATTACTCATAGTATGACAGCATATAGAGCAGAGATTGTTCATGGCGTAACCCCTAATACTTTGAATCGTTATGTTAAGAAATTTAATCTTGAATTAGATTATTTACAAAGTATGGGTTTAAAAAAGTAATATATTAAAGTCCAGTGCTAGCTGGACTTTCTTAGAACATAGAATAATGCAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [76.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 632167-633035 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNRL01000001.1 Photobacterium sp. Alg240-V54, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 632167 28 100.0 32 ............................ TATAATTACCTGTAATCTGTGTTTGAACCACG 632227 28 100.0 32 ............................ AACACGTTCGAGCTGCTTATCGTGCTGCTGAG 632287 28 100.0 32 ............................ TCTAATGTCACCATCCTCGCGCCATTGTTGCA 632347 28 100.0 32 ............................ TTTCGCTCGTCGTGAATATCTTGCAGTTTGTC 632407 28 100.0 32 ............................ GGAACCATTAGGTGCAAGTGGCTCAATTGCTG 632467 28 100.0 32 ............................ TATAGAGTAATGTAATTGTTACCTATTAAGGC 632527 28 100.0 32 ............................ TTTTATTTGGTACAGCAATAGTAAAACTTTGT 632587 28 100.0 32 ............................ ACCACCATCAATTCCATCTATAGCCCCAACGA 632647 28 100.0 32 ............................ ACATATTAACTGACGCAATGACCGTGAGTGGA 632707 28 100.0 32 ............................ GCTAAGACGGAGCGCATGACACAATCAGGTTG 632767 28 100.0 32 ............................ CTGTACAGTCAACGGCACCCCGTTCGCCGTGA 632827 28 100.0 32 ............................ AGCATCAATCCAATTTTGATTGATAACGGAAT 632887 28 100.0 32 ............................ TGAATAAGCTTCTTCTCATTTACTTGGCCGCG 632947 28 100.0 32 ............................ AAGGAGTTGATCGCGAGCTTGTTATTGTTGAA 633007 28 92.9 0 .........................TT. | T [633028] ========== ====== ====== ====== ============================ ================================ ================== 15 28 99.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CAGAAGCCAATTAATACACCAGCTTGAGATAGCATTCGTATAGCAGCTTGAGTAATCGACGTACCAGTTCCTAAAAGGATAACGGTCGTATTAGCAATAGGAATATTAAAATAGTGATTTTCTTTTTTTGCCTCTGTCAAATAAAGAACTCGCCCATCTTTTTGCATTACTCGACAATATTCTAAGTAGTAAATATTGGCTCGTTTAGAATGAAGAATTGCTTTTAAATCAGATGGTGAGAAGTCATCCATGACTAGTATTACCTATAACTTATTAATCATTTATTTGAATGATACCCTTTGTTATTATTTAAATAATTGATCATTGTTGCATATCCGATATTTCTTATTAGCAAAAGCGTAATCACAAATACCCTTTTTTATTTACTAACCATCCCACCCATATAAAACAACAACTTAAAATATCGTTAAAAAAAGGGTTTTTGATGGAAATTTACTGTTTGGCTTTTATAAGCAATAACTTATACTAATAGTGCTTCA # Right flank : ACTGGCTGCAGCTATTGCTTCTTTTATTTCATCAGAACTATACCCTTTTGAAGACAAGTAAGCATAGGCTTTACTTTTATCTTTAAAGTCAGATAGATCAAACCGTTTTTTAGCCAGCACTAATTGACAATTTTCATAAAAATCGACCTCACCTGCCTCCTCTAAATCGTAGAGTACTTGCTCAAGATGAGTAATATCAACATGCTTCATTTTAAGCTCTTGCTTGATCACCGTTTTACCTTTGAGCTTACGTACTAACTTCAACACTTCTGTTTCTAAATCTGCATTCATGCCTTTGATTTTAGCTTTACTTAATAATGTATCTGCGGCGGCGTGTTCTGAAATTGCAAATGAAATGTCCTGAAAACTAAATCCACGCTTAGTAAGATCGTTGGTTACTTTTTCTTGTGTCGTTTGACTAAAATCCTCATAGTTACTTAGGCGACGGGTTATTATCGCAAGTTCTGATACCTGATTTTTATCGATGATCTCAGCTAAGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //