Array 1 24117-23812 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CTWF01000048.1 Staphylococcus aureus strain IU4, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence        	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=======================	=================================	==================
     24116	    23	 100.0	    33	.......................	CATTTTTGTAAGCTGACTTTTCGCCAGCTTCTA	
     24060	    23	  95.7	    33	.A.....................	TTGTTTGTTGGAATTGGTGATCCTATTTCTCTC	C [24052]
     24003	    23	 100.0	    33	.......................	CATTATTGTAAGCTGACTTTCCGCCAGCTTCTA	
     23947	    23	 100.0	    33	.......................	TTGTCTGTAGAAATTACGGACCCAATTTCTCTA	
     23891	    23	 100.0	    33	.......................	CATTATTGTAAGCTGAACTTTCCGCAGCTTCTG	
     23835	    23	  91.3	     0	.......C....C..........	|                                	A [23824]
==========	======	======	======	=======================	=================================	==================
         6	    23	  97.8	    33	TGTTGGGGCCCCGCCAACTTGCA	                                 	       

# Left flank :   |
# Right flank :  TTGTCTGTTGAAATTGGTGATCCTATTTCTCTCTGTTGTGGCCCCACGAGTATTGAAAAAACTTGTTATAAGCTTATTTTCATTTAGTCAACTACTACCAATATAGCACTAGAACTGGAAATGATAATTTAATATTGTACACTTTTGATTGTTTAAACATGTACATATTTTAAAAAATAGGAGAGCAAAGTAAATAATTGATATAGTTATTTTGAGAGTAATCCTAGGAACTATTGTATTTATATTTGTCTCCCCTACTTTTAAATGTCATTCATTATACATAAGCATTTTGATATAGAATTTATCACATATGCAAATTGAAAACAGGTTAAGACCATTTTTTGTCTCAACCTGTTTTATTTATTATCTATTTATAATTTCATCAATTTCTTTGTATATTTTTTCTAATGCAACTTTAGCATCAGCCATTGATACGAAATCATTTTTCTTAAGTGCCGCTTTAGCTCTATATTCATTCATCATAATCGTACGTTTATAAT

# Questionable array : NO	 Score: 2.75
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TGTTGGGGCCCCGCCAACTTGCA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-2.10,-2.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [60.0-0.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.64,0.78   Confidence: LOW] 

# Array family : NA
//