Array 1 4616425-4620592 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056032.1 Spirosoma sp. KUDC1026 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 4616425 30 100.0 36 .............................. GTCTGATCGTCTTGGGGTCTACTTTTTCGAGCTTGT 4616491 30 100.0 36 .............................. ATGTAGCCCGTCCGACGCGGGGGTGGTCTCTTTTTG 4616557 30 100.0 36 .............................. GTTGATAGTCGCTGGCACGATCAGGATTTAGTGAGA 4616623 30 100.0 34 .............................. GGGATACGAGACAGCTCCTTACAGCTATCGCCCT 4616687 30 100.0 35 .............................. TCCTCTTATCTCTCCCGCGTTGACCCGGCGGGGTC 4616752 30 100.0 36 .............................. CCAGTACTCGAAACTCACCTCGAGCAAAGCCCATCA 4616818 30 100.0 35 .............................. TTTCTTCGAACTGAGCCTGCTTCTGGCGAATCGAC 4616883 30 100.0 37 .............................. ATTTGAGAAGGACCTTGCTGAATTAGCGGCTTGATAC 4616950 30 100.0 36 .............................. CCGTTGATCGCCTTTTTGCTCCATCTGGAACAATAG 4617016 30 100.0 36 .............................. ACAATCTTCAGGCAGAAGAAGAAAGCGGCGGAAGGT 4617082 30 100.0 34 .............................. ACGGCCAGAGCGGGCGTTTTTCCCGCGACGGTCG 4617146 30 100.0 34 .............................. GCAGGTAATCCTGTCCAAGCTGGTGACGACCCGC 4617210 30 100.0 36 .............................. ATGATGAATACCTGCTTTACCCACGGGCCTTTTTTG 4617276 30 100.0 37 .............................. ACCTCTTCAATCGCCTTACTACGCAGGGCATAACTGT 4617343 30 100.0 36 .............................. ATATTGGAGAATGTAGCATGGTCCAAAATGCCCGCT 4617409 30 100.0 35 .............................. TCGAACGCGATCTTTGCCTGGTCCTCTTTGGTCGC 4617474 30 100.0 36 .............................. TTACCAAAGGCACCAAAGCCCGCAAAACCCGAAGGG 4617540 30 100.0 35 .............................. ATGATAAGATGTATTTTGGCGCGGAAAAACTATCC 4617605 30 100.0 35 .............................. CAATGCTCATGATCGGCTCGGGCTTTTTGATCAGC 4617670 30 100.0 36 .............................. AAGCCGTTCTGACCCGCTGGAAGTGGGACACCCGCA 4617736 30 100.0 35 .............................. AAGGGATTCGTTTCAATACGGTCGTCGTAACGGGC 4617801 30 100.0 36 .............................. AACATGATACGCTGAAGTACAAGCAAACCCATATCA 4617867 30 100.0 35 .............................. AGGGGTTCTGTTTGGGGGCTTTCCCTCGACCGATA 4617932 30 100.0 35 .............................. ATTAGTTACGTAGTTGTACTTATAACTACGTCCCT 4617997 30 100.0 36 .............................. GTCGTCAACTCGCCGTCGTAGCGAAGTCGGCAGTAC 4618063 30 100.0 36 .............................. GGTCGGGCCGCTGGCGGTGGTCGTACTTTACCAAGT 4618129 30 100.0 36 .............................. ATTATTCCGGTTGGCGTACGATGAATATTCTCTCTA 4618195 30 100.0 35 .............................. ATTATGAATACAGCGACAGCGCCCATCCCGTTGAT 4618260 30 100.0 36 .............................. ACATCAAACAGGACCGCCTGTTTACCCCGTTCCAGA 4618326 30 100.0 36 .............................. TTGAATAATGGGCAAATACGATCTGCGGACCAAGAA 4618392 30 100.0 36 .............................. ATCGTCAACTGGGGCATGGTCAGGTTCGGCAGGTGA 4618458 30 100.0 36 .............................. TTGCTTTCAGTATCGGCGCCGGTAATGACTGTAGCA 4618524 30 100.0 35 .............................. ATAATTACGGTTCGGAGGGCCAACCCAGTGAGTAA 4618589 30 100.0 36 .............................. TTTGTACGTACAGTTTATAAGGTGAGAAATAGGGAA 4618655 30 100.0 36 .............................. ACAATTTAAGGACTGCCATAATTGGGTAAAATTGTT 4618721 30 100.0 36 .............................. GGCACCTCCAGGCGGGTGAATGGATGGCGTAGCCAA 4618787 30 100.0 36 .............................. GGGTCAGTAAGTCTTTAATAATCATTCGGCCGGTTG 4618853 30 100.0 36 .............................. ATCAGGAACGGCTGCGGGTGAAGGCGATCAAGGCGC 4618919 30 100.0 36 .............................. GCGTTACCGCTGGCTCGGGCTTTTTCGGGAAAGATT 4618985 30 100.0 35 .............................. CTGTCCAGCGTCCCGGCAAGTCGCAAAGCCTTGTT 4619050 30 100.0 35 .............................. CGCGCTTCAAGCCCACTGTGACCGGCACCACGGTC 4619115 30 100.0 35 .............................. ATCCTTCGGACATGCTGAATATGCAGCTGACCAAG 4619180 30 100.0 36 .............................. GAAACTATTTTGGCAGCAAAGCGAGAATATGACAAA 4619246 30 100.0 37 .............................. ACATTGGCGACAGCTACACCTATCGCAGCACGTTTCT 4619313 30 100.0 35 .............................. CGATGTACGGGGGGCGGGTCGCCACGGTGCTTGTG 4619378 30 100.0 37 .............................. CTTGGTCGGCTTTGTGGGTAGCCGTGCGGCCGTACCT 4619445 30 100.0 35 .............................. TAACAAACAGAGCAGAGGTAATCGGCACCCAAATC 4619510 30 100.0 37 .............................. CTGAATAAGTAAGGGTTAGGAAGTTCGTAAAGCCGGG 4619577 30 100.0 37 .............................. AGCGTCAGAGGTTCAGAAAAAGGTTGAAACTGCGCGC 4619644 30 100.0 35 .............................. TTGATGGACGGCGCCACCGCCCCGCGCGCAATCAT 4619709 30 100.0 36 .............................. GGTATCGTTTTTGAGCCGGATCAGGTACGTCGTCGC 4619775 30 100.0 36 .............................. ATCTGGAGGGCTATAAGGCGGATCATGCGGCACTGT 4619841 30 100.0 37 .............................. GGAGCAGTTGAACCAGATCATCGGGAATACGGGCAAT 4619908 30 100.0 36 .............................. ATCTCCAGTTCAGACAGAACTACTTCGTCCGACGTC 4619974 30 100.0 35 .............................. CCAGGCAAAGCACTTGCGATATTTCTCCAGCATCG 4620039 30 100.0 36 .............................. TTGGTCTGATTGTAGGCCGGGTAAGTCACCACCGAG 4620105 30 100.0 36 .............................. ACCTCCTGCACGCGGTATAACCACTCGCCCGGCTGA 4620171 30 100.0 35 .............................. TATTTTACGGCTCAGAAAACACGCAGTTTCTTAAT 4620236 30 100.0 36 .............................. ACTTGTACCCACCCCAGATAAAATCATTCGGGGACG 4620302 30 100.0 35 .............................. ATCGTGGGGCGGCATAGCCAGCGATAGAAATGAAA 4620367 30 96.7 36 ..........C................... TTTGAGCCGGTCACGTCTTCGCCCTCCTCAACTTTG 4620433 30 100.0 35 .............................. TTCGGACTCATTGCGGCAGCAGTGGCCGTGGCGGC 4620498 30 100.0 35 .............................. CTGTCAGGCTGCTGCGGGGCGTTACCATGTTCAGA 4620563 30 86.7 0 .........T.............CG....G | ========== ====== ====== ====== ============================== ===================================== ================== 64 30 99.7 36 CTTCTAATCGTACCTGAGTGGAATTGAAAT # Left flank : TCTCTCTTTCGCTCTTTAGTTATGTATATCATCCTGGTTTATGACATGGGGCAGAAGCGCGTCGGGAAGATGCTCAAGCTTTGCCGGCGGTACCTGAACTGGGTGCAGAACTCAGTGTTTGAAGGCGAAATGACGGAGGTTCAATTAAAGGAGCTTCTGCACGAGGCCAGACGGATTATGAACGAGGACGAAGACAGTCTGATCCTGTTCAAAAACCGCGATAAGAAGTGGCTCGACAAGCAGATCGTGGGTGTCGAACGGCAATCGACAGATGATTTTCTGTGAGGGTTTTGTCGTCGATCGCTCTAACCCTGTTCTTTGACGTACTGTTTTTCTTATGCCTGGCAGTTGATTACGGCATAACTATCTGATTATAAACGGTCGTCGATCGCCGGGGGTTTTCGTACTATTAGTGATCGACGATTTTTGGTTTACAAATGGCCAGACCAAAAGTGGCATAAAGGCTCAGAAAAGCCTTTTTTTTAGTCGTAAATTCACGG # Right flank : GAATCGTGGAGATAGGCACCTGGGGTACGGCCGTATAATTCACCCTAGATTGCTTACCAGACTACTGCGTATTAGTTCGGAATGGGGATTAGTAGAAATACGGAGGGAAGACTGCAGATTTTTTAAAACTCAATGGCTGTTTGCCGGTTAACTAGATATTCATACCTAACCCGCTGATCTATACTGACTTTTTTGCCAGAAAGAGCTGATCTGGCTGCTATAACCTGTCCCACAAGAATACCGGTCATTCTCCAAATAAGTCAATTTAACTATTTTTTAGAAATTCTTGTTTAGCCAGCGTAAACCAAAAAAGAATTTCTGTCGTTACCCCATTAATGGCTTTTTAATGCCATTTTAATGTCCATCTCTTAACTACACTCATGGCAGAAAGTACCCACCTACAGCCACCTCCGACGCCCGTTCAGCGCCTGATACGACTGTTAGGCACTGAACAAAAGGACATTGGCTATATTCTTTTGTTTGCAACCATCACCGGTCTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCTAATCGTACCTGAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 5244848-5244622 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056032.1 Spirosoma sp. KUDC1026 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 5244847 30 100.0 36 .............................. ATGTAGCCCGTCCGACGCGGGGGTGGTCTCTTTTTG 5244781 30 100.0 36 .............................. GTTGATAGTCGCTGGCACGATCAGGATTTAGTGAGA 5244715 30 100.0 34 .............................. GGGATACGAGACAGCTCCTTACAGCTATCGCCCT 5244651 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 100.0 36 CTTCTAATCGTACCTGAGTGGAATTGAAAT # Left flank : CAGCGCCCAGTCTACCCAGCGCGGGTAGGGTACGCCTTCCTCGCTCTCCTTGCAGTGTTGCGGCACCTCGAACGGCTCAGAATATACGTTGCGGTTTCGGCCGGGTCGTTGGCGCATAACCTCGGCCCCTTCGTTCAGCACCCGATTGAGCCACGAGCGCGGGTCGATCGGCTCAATATCTTCCGCCTTTTCGGGCTTCTGTAAGCTATCGGCGACCTCATCGGCAAACAGGGCGGCATCGAACCGGGCGGGCATAGCGATTAAACGGAGCCATAATAGGCGCTGAATCTCGTAGATGTTCTCTAGCAGTTCCAGTAGCAGGTAGCGAAGGCCGTAGCGGCTCTGGCGTTTGGTGCGGGGTGCTGTTGTGTTCATGGTTTGGAGGGGGTTTGGCTTTGGAAGTAATCCTTTCGTACTGTATCTGCTAATACTTGGTAGCCAATAGGAAGGGAGGGTATTAGCTCATTGCCCTTTGCTAGAGCCTCTTCTGAGGTATCGAA # Right flank : TCCTCTTATCTCTCCCGCGTTGACCCGGCGGGGGCGGGGTTAGAATGGTTCGTCTGCATTGCGTTCAGGTAGCTTCCCGTCCAGAAACAGCAGGAGCATTTCAGCCATCCCATTTGCGTGAAATGCGATTGTGTGTCTGTCGTTTGCGTAGTGAACTTTTGTATGCCCGTGCGCGCCAGACCTGCCAGTTGGCGTAGTTAATTTTATAATAGCCTGAGCCTGATTCCTCATGCGCTCTGCTGGCGTGATGATATTTTTCGATGCCTCCATTTTTATTCTCGTTCTTTAGATAAACTTCTTCCCCTCCCCATCCCACCCCGCCCCGATGCGTTTGGCCTTATTCCAGAGCCGGGCGCGGTGGGTCTCGCTCATGCAGGCGATCCAGTACCTGTTCGTAATCAGGTGATTCAAATCGCTGGCGTAGCGGGCGTCGTGTAGGTGCCGCTCCAGTTCATAATCCCCCATCGGAGCTTCGTAGCGGCCTGACTTCTTGCCCAGCT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCTAATCGTACCTGAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA //