Array 1 52-2763 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB913030.1 Streptomyces purpureus KA281 StrpuDRAFT_scaffold1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 52 29 100.0 32 ............................. TGGTTCCACCGGATCAGGCGGCCGTCGATGAG 113 29 100.0 32 ............................. TCGTCCTGTTTCTTCTGCCCGTTCCACCGGCC 174 29 100.0 32 ............................. CCGTCCAGCAGTCGGGGGTGTTCCCCCAGGTC 235 29 100.0 32 ............................. GCATGACGATCGGGCACATTGCGGTTTTCGAC 296 29 100.0 32 ............................. CGCCTGGAAACCCTCGTCGATGATGGGCTGCA 357 29 100.0 32 ............................. ACCATCCACCGCATCGAGTACGGCACATCCGA 418 29 100.0 32 ............................. TCGCCGGGGCGCAGCTTGTTGGGCTGCACGCT 479 29 100.0 32 ............................. TTCGGCGGGGTGCGCGGTGGCTCCGGGTCGCC 540 29 100.0 32 ............................. CTCGCCGAGGTGGAGATCGACCGCGGGGCGAG 601 29 100.0 32 ............................. GGGCTGTGGACCCTAGTCCTGGCCCACCACGC 662 29 100.0 32 ............................. GTCGCCGCGTACCCGAGTCCCTGGACTGCGGA 723 29 100.0 32 ............................. TCCTTGACCCCGGCCCGGGTCCGGCGGCTGCT 784 29 100.0 32 ............................. CTGTAGCCGCTCATCCGGCCCGTGCTGGGCGC 845 29 100.0 32 ............................. ATGGCCCGCTCGCGCAGCCGCCCCATGGCCTC 906 29 100.0 32 ............................. GCTCGACGGGAGAGCGGCGGTCGGCCTGCCTG 967 29 100.0 32 ............................. GCCTGGTCCAGGAGATGCGCAGCGGTGTCTGG 1028 29 100.0 32 ............................. GTCGCCGTCGGCGGCTGGACCCTGACCCGGGC 1089 29 100.0 32 ............................. GCTCTCCGTGCCGTAGTGCTCCAGGTACCAGG 1150 29 96.6 32 ............................T CCACGTGGTAGAGCCTGCGGAGGAAGTCCACC 1211 29 100.0 32 ............................. CTGACTTCCTTGACGGTGTGTTCGGTGCGGTC 1272 29 93.1 31 .........................C.G. TCTACGTCAGTCCCAAGGACGGCCGGAAGAC 1332 29 100.0 32 ............................. GCGCCCCACGACGCAGCCGGCGCGCTCCTCCC 1393 29 100.0 32 ............................. GCACGATCCTTGATCTTGGATCGTCCCGATCT 1454 29 100.0 32 ............................. GGCCCCTGCTCGATCATCCGCGAACTGCGCGC 1515 29 100.0 32 ............................. TTCTCGTCCGTGAGGGCGAAGGCCGGTGGGAG 1576 29 100.0 32 ............................. GACTTGGCTACCGCCTCGCGTACCTCGCGGGA 1637 29 100.0 32 ............................. GCGGCCACGTACTTGACTTGCTGCCCTTGTAC 1698 29 100.0 32 ............................. GGGCCGAGGAGGGTGAGGCCGAGCATGGGGTT 1759 29 100.0 32 ............................. GGTCCGTCCGGTCTGGTAAGACCATCGCGAGC 1820 29 100.0 32 ............................. ACGTTCGGGCATCCGCTCCCGCATCCGCTCCA 1881 29 100.0 33 ............................. CGGCCGGGCGGCCGCGGCTCGGGCCTTCGCCGT 1943 29 100.0 32 ............................. GGTCTCGGGTCCGGCCGCCGGGTGCGGCTGCT 2004 29 100.0 32 ............................. CGCTGCCGGGTCGCCTGGCCGGGGGTGTACTC 2065 29 100.0 32 ............................. TGGGACTCAGCCAGTACGCCGTCCCGGGCGGG 2126 29 100.0 32 ............................. TTCACTGGAGCGTTGTGGACCTGGATGCTCGC 2187 29 96.6 32 ............................A GGGGACCCATGTCCGTGCGCCTTCGCCACGCC 2248 29 100.0 32 ............................. TCCGCCTTGCACTCGCCGCACATGATGCGGCG 2309 29 100.0 32 ............................. GGTCGGGATCGACGGGTAGGCGCCGCGGCCCC 2370 29 100.0 31 ............................. CCGCCTTCGTACGCATGTCGAGAGTCCAAGC 2430 29 100.0 32 ............................. ACGCAGCAGATCCTCGGCCTGATGGTCCACCG 2491 29 100.0 32 ............................. CTGAACGAGGACGGCACCCCCGGCGCGAAGCA 2552 29 100.0 32 ............................. ACCACGGATCTCTGCGGAGTACGGGTGTCCGA 2613 29 100.0 32 ............................. TTGTTGCCCCGCAGCACCCCGTCCAGCATCGT 2674 29 100.0 32 ............................. CGGCTGGGAGTTCTACACCCCGCCGCCGCGCG 2735 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 45 29 99.7 32 GTCCTCCCCGCGCAGGCGGGGGTGTTCCG # Left flank : CGCAGGCGGGGGTGTTCCGCCCCGGCCCGACTACATCAAGATGGTCGCGGCG # Right flank : GCTCCGCAGTGACCAATTCCGCAGCGGCCTCTAGCTTGACTCTGTCGGTGATCTTGGAGTCGGCGGAGTTAACTGCCCAGGTTTCGCCAGGACTTCGGGCGAGGGATCTCACGCTGGTCGAGGTAGTTCTGGAAGGCAGTCGGCTGGCGGGGTGTGGGGGCTTCCTCAGCCGGTGACAGTCCGCTGAGGCGCTCGATGTTGACGGCGATGGCCGTCAGCACGTGCTGGACGTGGGCTTTGCTCTGTCCTCGGTAGCGGCAGCGCCGCATGCCGTGTCCGTGGGCGAACTCGTTGACCGTGCCTTCCACTCCGGAGCGAACCGCGTATCGGGCCTTCCACTCGGGCGTCTGCTGTTTGGCACGGACACGGAGTTGGAGGTCACGGAGCTCGCGCGGGGGAAAGCCCACGGTGCGGGCGCTGTCGGCGGTGCTGGTGCACTGGGTGCGTGCCGGGCAGGGACGGCACTGGCTCTTGGTGAACCGTGCCACGATCAGCGGGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCAGGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCAGGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 7255418-7254810 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB913030.1 Streptomyces purpureus KA281 StrpuDRAFT_scaffold1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7255417 29 96.6 32 A............................ GACGAATACGGGCTGAGCGACAGCGCCGTCGC 7255356 29 96.6 32 A............................ CTCGACGACCACTCCTGTGACGCGCTGCGGTA 7255295 29 96.6 32 A............................ GGCGAGAGGAACAGCGTCATCCTCCAGCTCAC 7255234 29 100.0 32 ............................. CCGGGCGCTGGACCCTGGTCCAGATGGCAGCC 7255173 29 100.0 32 ............................. CCCCGGCCCGACTACATCAAGATGGTCGCGGC 7255112 29 100.0 32 ............................. CATGAGGCGATCCTCGCCTACGGCCGCTGGGC 7255051 29 100.0 32 ............................. GACTTGGCTACCGCCTCGCGTACCTCGCGGGA 7254990 29 100.0 32 ............................. TCGTAGGAGTTGGGCTGGGCGTGCCGGGCGTC 7254929 29 96.6 32 ............................T TGTTCTTGCTGTCGTCGTGCTGTGGTGAGGCC 7254868 29 100.0 0 ............................. - Deletion [7254840] 7254839 29 72.4 0 ...AG..A....AT.....C..CC..... | A [7254812] ========== ====== ====== ====== ============================= ================================ ================== 11 29 96.3 29 GTCCTCCCCGCGCAGGCGGGGGTGTTCCG # Left flank : TCGCGATCATGCGCGTACTTCGCTTCCCCGAGGAAACCGCGATGAGCAGCCCGCGCCTTGAGGATCATGTCCTGGAACTGCGGTGTGATCTTGCCCAGATCGTGCAGGCCGGCCCAGAACATCACCGTCGCCCGCGCATCCGCCTCACTCAACCCCAGCCCCTCGGCCAGGCGTTGCCGCTGCCCCCTGGGCAGCACACCGTCCCACACTGCCCCGCACACCAAAGCCGTGTCCACCAGATGCCCGATGACCGGGTAAGGCTCAACTAACTCGCCGGACTTACCCTGAATACGCGCATCAACCACAGGCGACCTCCTCAACGGAAAGCAGACCGCTGAAGTCCACCACACGGCACTGACAAAGCCCGCTCACACCAAACAGAGCAGCCACCACATCGTCTCTCTGGGGCACAAACGCTCTGACACAATGCAGGCATGACAGACAGACCCACCACAGGCAAAGAAACAGCAAAGGACTCCTGAAACCCCAGCTCAGGAAGT # Right flank : GCGTCCTCCCCGGGGGTGTTCACGAGTGCGTCTGACCAGCCGGGCAACCACGGCCTACAAGATCGCTTCCCGGCGACGGCGTGATCGTTTCCCGGCGCATCCCCAGAACGGGTACGGTCCACCGCATGGTGGGCGACTTCGATGCAGCTGAGGCCATGCACGACCGCATATCGGACCGGTCGGAGGCATGGGACTTCATCCGGGCCTTCGCGGCTGGGTGGTACTCGCCCCTGACCGATGGCGACGGCGTCGGCCAGGAAGAGCTCAAGCAGATCGAAGGCCGGCTGGGACTGCCCGTCCCTACCGCTCTGCGTGAGGCATACCTGCTCTTCGGTCGGCGTCCGGAGTTGTTCGAGCACCAGGATCCGATGCTGCCTCCCTCGGACCTTTTCGTACACGCGGACCTTGGGGGTGTGCTGTGCTTCCGAAGCGAGAACCAGGGATGCGCCTTCTGGGGCGTGCGCCTGTGCGATCTGGAAGAGGCTGACCCGCCTGTCGTT # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.29, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCAGGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCAGGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.60,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 7267583-7265595 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB913030.1 Streptomyces purpureus KA281 StrpuDRAFT_scaffold1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================== ================== 7267582 29 100.0 33 ............................. GCCGCGGGGACGACCGGGGGGGACGACCGGGGC 7267520 29 100.0 32 ............................. GCCGCGATGGAGGCGGCCCGCGGGGCGCCTGG 7267459 29 100.0 32 ............................. ACTTGGGTCGCGCTCAACTCCGAACTCGACGC 7267398 29 100.0 32 ............................. GCCGCGGGGACGACCGGGGGGACGACCGGGGC 7267337 29 100.0 32 ............................. ACCAACGGTGACCCGAAGCTGAGCAACCGCGG 7267276 29 100.0 32 ............................. CGATTCGTGAAGCTCGCCGAAGAGCTCGGCCT 7267215 29 93.1 32 ..CC......................... AAGTCGCCCAGCAGGTCGCCGTCCCAGTCCGC 7267154 29 100.0 32 ............................. CACATCGAGCGGAAGTGGGGCCGGCGCAAGCT 7267093 29 100.0 32 ............................. TCCGACGCGCCGGAGTGCGACGCCCGGTACTG 7267032 29 96.6 32 ...............C............. ATGATCCGGCGGGCGAACCCGTTCCACCGGAT 7266971 29 100.0 32 ............................. CTTCTGCTTCGTCGCGATCGCCTGCTGACCGA 7266910 29 100.0 32 ............................. TTCGAACCCGCCCCGCGCCCTGCACGGCCGTC 7266849 29 100.0 32 ............................. CAGGGGCACGACGGTGCGCAGCAGGGACGCGA 7266788 29 100.0 32 ............................. ACATCGGAGCGGCGGCGGACTATCCCAACGTC 7266727 29 100.0 32 ............................. CTGGTGGTACATCGGGGAGGCGCCGCGTCTCA 7266666 29 100.0 32 ............................. CCACGGGCGCATTACGTACGACCGGCGATGTC 7266605 29 100.0 32 ............................. TACTGGTGGATCGCGTACGAGTTGGCGTCGAG 7266544 29 100.0 31 ............................. CGAGGGGTACATCGAGCACTGCGCCCGGCTT 7266484 29 100.0 32 ............................. ACCTCGGCATCGCTACCGCCATCGTCAGGGGC G [7266483] 7266422 29 96.6 31 .........T................... TCGTTGCTGTAGATGCGCGCGGTACCCAGGC 7266362 29 100.0 32 ............................. GACTCCATGACGCTCGGATCGAGGACCTCGCC G [7266361] 7266300 29 100.0 31 ............................. TACCTGACCACTGGCAATCAGCGCTCGTGGC 7266240 29 100.0 39 ............................. CGCTAGAGGGAGACCTAGCCTTTAGCCTTCCACTTCAAC G [7266239] 7266171 29 100.0 46 ............................. ATCAATTCCTGAACTACGGCTTCCGGGACTGCGTGGTCCCCTGAGC 7266096 29 79.3 31 T..T....T..G.......T....A.... CCGTTGATCACGAGCTGGCCGGCGTTCGCAG 7266036 28 82.8 32 .C.T.......G.........-....T.. CACCTGATGCCGGGCGCCGAACGCACGCAGGA 7265976 28 82.8 32 A..C....-..G.G............... CTTGCCTTCGACGACTGTCCCGGTCTCAGCGC 7265916 28 82.8 30 .C.T...T.......-........C.... CATATCTTCGGCGGCATCTGGGACATCATC 7265858 29 89.7 26 ...C.......G................T GCTCGTCGAGTGCGCTCATGCAGTTC C [7265853] 7265802 28 82.8 32 C.TT.......G.........-....... GCTCGGGCCTCGGCGTCATCGCCGACGTGCGA 7265742 29 93.1 32 ...........G........A........ GAGCTGAAGCCGCAGTTCTTCCTCGACCAGCT 7265681 28 89.7 30 ...T.G.........-............. CCGACGGAGCCCCGAAGCGAAGTTGCGGCC 7265623 29 89.7 0 .C.T.......G................. | ========== ====== ====== ====== ============================= ============================================== ================== 33 29 95.7 32 GTGGTCCCCGCACAGGCGGGGGTGTTCCG # Left flank : CCCGGCAACCTCCCCCTCGAACCTCTTGTCCATCGTGGCGACCCCGACCGGCACCGCGGTCTCAATCGCCGGGCTCGGCACCGAGGCGGGCGTGAAGTCAACGACCTTGAACGTTCCTGAAACTCGCATTCCCGGAGCGTACTGGCCACCACCGACACCAACGCTGCCCAGCCCCATCATGATCCGCCGGACAGTCCCTAGTCCTGTGATGCGGGTCGGCTGAACTGAGCAGCCCCCACAGCGAGGTTCAAAAGGCTTCATGACCCTGACAGAAGACGACTTCACCCCCCGCTCAAGAACCACAACCACACAACACCACCACCCCCCCAAACCCACCAACCCCTCAACACCCGCCCAGACGGTGAACAGCAACAGTCGCCCCCCGGCCACAGGACCCCTCCACTGCCACACAAGCCCTCTGACACAATGCAGGCATGACAGACAGACCAGCCACAGGCAAAGAAACAGCAAAGGACGCCTGAAACCCCAGCTCAGGAAGA # Right flank : GTCGGCGCCTGGATACAGCCCCGTTCCAGGTGTGTTCCTCGGCTGGCAAGACGCACGACGAAACGCCCCGCATGGTTCAGCCCCGTAGCGTCCGATCAACCGGTGGTAGAAGGCAGAATCCCGAGGGCGGGTGACGCGTCGGCGTATTCATCAGAGCGAAAGGCGACGAGTACGAGGCCGTCGAAGTCAACCGGTGTACGGCGGCGCTCGCCAGCTGTCCGCAGTGCGTAGCCTTGCTCGTTTGACTCCGGGTGTACCAGCACTGCCGCGCCGGCTCCGATTGATGCACTCACCACGCGCCAGAGTTCGTCCCGCACTCGTGCCGACAAGGTGCCGACGTACAACCCCGGTGTGGGTTCAATCATCCAGCGGGTGAGTGCGCCTCGGACATGGTTGGGTACGGCTGTGGTGGCGAGGACGGTCATGGACGGCACGGTGTGCGCATCTCCCTCTGTTTCTCAGTCTGGTGCATCGGCAGATTCTTGATCGGCAGGATCGTT # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCACAGGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCACAGGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.60,-12.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [39-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //