Array 1 18861-17381 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLWD010000002.1 Enterococcus sp. DIV0869a scaffold1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ==================================== ================== 18860 34 100.0 35 .................................. ATGTATTCAGAGCTATGGAGCGTATGACACAACAA 18791 34 100.0 35 .................................. AAGATAAATATGAACTACAAGGATCAGGTGGCATA 18722 34 100.0 35 .................................. ATTTTAATCCCCCTAATAAGAATAGTATTTTATAA 18653 34 100.0 35 .................................. AACGTCACCTTTACCGATATACAATGTTTGACCGT 18584 34 100.0 35 .................................. ATAGTTACTGACACGAATGAACGAAGAGTTGAATT 18515 34 100.0 33 .................................. TTACCGCTTGCCCGTGGATAGATAGGAGATAAA 18448 34 100.0 35 .................................. TTACCACCTATACTTCAAAAGTATTCGAGTATGCT 18379 34 100.0 35 .................................. GATGTCTTCAGAGGTGATATTTCCGAATTCTTTAT 18310 34 100.0 36 .................................. GTTTACCACATAATCGAAAGTAGGCATTTCACGTAC 18240 34 100.0 35 .................................. ATCCCATAGATACTTTTTATGCTCTTCGAGAAAAA 18171 34 100.0 34 .................................. TCAACTGCGTTGTATTGGTACAGTGATCAACCGA 18103 34 100.0 36 .................................. AGGTTGGACATCCGGCGAAGGCGGAAGCTCAGAAAC 18033 34 100.0 34 .................................. CCTTACTGGCAAAGCTGACTCGATTCAAAAGCAG 17965 34 100.0 35 .................................. ACTTTTACCTGGTAGTCGAACTGTCACAACATATT 17896 34 100.0 34 .................................. GGATCAATTTCAGTAATCGATCCTAAATTATTGG 17828 34 100.0 33 .................................. TTCGCCGATTTTTTGCGCTTCAGTTATCCCTGC 17761 34 100.0 36 .................................. CTAGCATATCAATCGCATAAAGTACAGCTCGCTTCA 17691 34 97.1 36 .........................A........ GTCATATCGATCAAGTAAGACATTCCAAACGGTACG 17621 34 100.0 35 .................................. TAATCCATCTTGATTATTTGGTGCCTCAGCATTAT 17552 34 100.0 34 .................................. TTCATATGCAAGAAACGTTTATCCATCAATTCAA 17484 34 100.0 36 .................................. CTGCATCTGTTGCGTTTGTTCTTGCTGCGACTACCA 17414 34 70.6 0 ...............AA..CA.ACAA.C...T.. | ========== ====== ====== ====== ================================== ==================================== ================== 22 34 98.5 35 GTCTCACTCTGTTATGGAGTGAGTGGATTGAAAT # Left flank : ATGGTGATGGTGGAGCAGATATTTTACCATTGTTCCGTTTAAATAAACGCCAGGGAAAAGCATTACTAAAAGAATTAGGTGCACCAGAAGAACTATATACCAAAATTCCAACAGCTGATTTAGAAGATGATAAACCGTTAGTAGCTGATGAAGTAGCACTTGGCGTATCATACGATGATATTGATGATTATGTTGAAGGAAAGACCGTATCAGAGAAAGCAAGAGAAACAATCGAAGGTTGGTACAAAAAAACACAACATAAACGCCATATGCCGATTTCAATTTTTGATGATTTTTGGAAATAAAAGTTAGGTTCCTAAATAAATTCTGTTGGTGCGAACCACAAGTGCCCATAAAATCACTGGGACATCCGCACCAAAATTAAGAGGAAAATACTCTGTATTTGGTCCTTTTCCTCATTTTATTTTAATGTTCAAATTGTTTTTGTGGAAAATTAATGATTGTGAGTAATTTATGACGAATAATCCTAATTTTTCACG # Right flank : ACAAAGTAAAATAAAAAGAAAGACTAATTCTTAGCCTTTCTTTTTTTACACCTAAGTTAAATCTAAACACCTTCATTTTGTTCAAATGATTAAAAAAAGTGTAAACTTAAATAAGTTATCTGAAATACTTAATAAAATACTCTACAATTGGATTAATTATAGTTAGAAGAAGGTGAAGGAGAATATGAAAAAAATATTCAGAAAAAAAAGAAACATTGACAATGAACCGTTTCTTTCATCAGAAGAACAAAAACAACCAATAAATAACAACGACATTCGGATTCCGCCTAATGTTAAAGGCTTGTCAGATCAAGAAGTGCAGCAACTATACTCTGAAGGTAAATATAATATGGAAGTAGAAGATTTATCTAGAACAACGAAACAGATTATTCTAGATAATTCATTGACACTTTTTAATTTTATTAATTTATTTTTAGCTATTGCAGTATTCGCCGTGGGCTATCCAAAGAATGCATTGTTTTTCTGGATAATCATTATCA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACTCTGTTATGGAGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.82%AT] # Reference repeat match prediction: R [matched GTCTCACTCTGTTATGGAGTGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.80,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 106320-106757 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLWD010000020.1 Enterococcus sp. DIV0869a scaffold1.20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 106320 33 100.0 34 ................................. GTAACGTAGGAACAGCTATGAAGCCTTCAGATGG 106387 33 100.0 35 ................................. AACAGACACAACAACTTTGTCATTCTCCTGTAGCG 106455 33 100.0 35 ................................. ATAATATGGATAAAATTCTAAAGAAAAGAGGGGTG 106523 33 100.0 33 ................................. AGCTAAGTTCATTGTCCGTACAGAAAAATGATG 106589 33 100.0 36 ................................. TGCACTTGCGCTTTACCCATGCGAGCAAAGAAATCA 106658 33 100.0 35 ................................. GGTTTATTCATTCGGTTCAGTCCTTTCGAATTTAT 106726 32 90.9 0 .....................A.A..-...... | ========== ====== ====== ====== ================================= ==================================== ================== 7 33 98.7 35 GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Left flank : AACGTTTTGAGTTTTTACAAAAAATGTGGGTAAAAGAAGATCAACAATTATCGTTTGATTTTGAAGAACCATTATTGGTTGCTGAAGAAAATCCAGCAATTTTTGAAAAATACTCTCAAGTAGTTTGGCAAAAAAGAACCTTAGGAGAGGTAACCCATATTTTCAGCCATCTAAAATGGCATGTTCTTGTGTTTTACGGACGACAAACAGGATTAACAGCTTTGGAGGAAAATCAAGAGTGGGCAACAAAAGAAGCATTCTCAAGTTACGTTTTTCCCAAACCTCAGCAAAAAATGTTAGACCTGTACAATAAAGAATTTAAAACAAAAGAATAATATTTGGTGCGGACCCTAAGTGCACATAAAATCCCTAGAAGATCCGCACCAAAATTTTGCTGAAATTAGAGGGAAAATAGCACTTTTTCTCATTTTAATTTAATGTTATACTAGATTTAGTGTTGGAATTGTGAAAATATGTCGTGTATTTTTATCAATTTCACA # Right flank : TCAAAAGAAAATAATATCAGACAACTGAATGATCTAACTCTGTATAAAGCCACTAAATCAAAACAAATCTATTCCAATTTCAACATCAAATAAACGAAAATCAAACCATTTATTTTAATAGATATTCTCATTGTAATAAGAAAACAAACTACTTAGTATGCAAAGCTGAAAATTATGATATAATTGTAGTGATATCGGTGTAATGAACACCCAAACGAAGAGTAATCAGCTTTTAGAAGCGATTTTTCGTACTAGGGAAAGTTGGGGGACTATGGCAATTCCAAAAGAAGGTGAATTTGTAACGATTCAAAGTTACAAACACGATGGGCATTTGCATCGAACATGGCGAGATACTATGGTATTAAAAACAAGCGAGTATTCTTTGATCGGTGTCAACGATCATACTTTGGTGACAGAGTCGGATGGTAGACGTTGGGTTACTCGGGAACCAGCTATTGTTTATTTTCATAAAAAATACTGGTTCAACATAATAGCGATGA # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: F [matched GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 30595-31233 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLWD010000022.1 Enterococcus sp. DIV0869a scaffold1.22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 30595 33 100.0 34 ................................. TTTTACGGCATGATAGGTCTTTCCAGATCCAACG 30662 33 100.0 33 ................................. GCTGACACGACAAACGGAGCCAAAGTTTGAAAT 30728 33 100.0 35 ................................. ATCTACATGTTGCGGTTCTGAGTTTTGAGTGCCGG 30796 33 100.0 35 ................................. TTTGCGCCATGCTAACCACTTAGCGGGACTTTTAA 30864 33 100.0 34 ................................. AGGATAGCTTCAGTAATCATTGAACTAAATGTCC 30931 33 100.0 34 ................................. AAATAAGCAAAGCACTAAATTTATCAGTACACGA 30998 33 100.0 34 ................................. CTCTACGGCGAAAGAAACCTGTCAAATAAATATG 31065 33 97.0 36 ......T.......................... AATGTTTACTTTAGGTTTATCTGATCCAGGATTCAA 31134 33 100.0 35 ................................. ACAGATAGCAAAAGCTTCTACTTTCCATTTATAAG 31202 32 81.8 0 .......................-TT..T..TC | ========== ====== ====== ====== ================================= ==================================== ================== 10 33 97.9 35 GTCTCACTCTGTTTAGAGTGAGTGGATTGAAAT # Left flank : AATGAAAATAAGTGGTAATGATTTTGGCGGTATCAATCATTCAACCGTTGTGATTGGAAATAATAACAAAGTAACGAACAGCAAAAGCGCAGAGATCGATTGGGATAATTTTTCAGCAGAGATCATGACAACATTGACAAAACTTCCACAAAATAGTGAAGAATTTCAAGCATGTTCAAAATTGTTGATGGAATCAACATCAAGAGATGAAGGAAAAGTCACAGCGTTCTTGAAAAAATATGCACCGCAATTTACGTCAGATGTATTCAGTAATTTAGCGAGTACACTACTTTCGGATACAATTAAGAAGTTGATGTTTAATTTGTAACAGTGAATTTCATGGTGCGGACCCCAAGTGCACATGAAATCTCTGGGGGATTCGCACCTGATTTTCGTGAGGAAAGGGCTATTTCGGGTTGGTTTTCTCATTGAATTCACATTTTATAGGTTGTTTTAGGTGAAATATTGTCGTTTTTCTTTGAGAAATGCTGTATTTCACA # Right flank : CCAACTTTTTCTCATAAATTTCAACAAAAATCAAAGGAATTGAGTGGTCGTACTAATGAATTAAAGGGTATAATTAGAAAAGCTAGAAAAATACATAGTAACGACTATAGACAATTTTTCTAAGGGAGTTAAAAGGAGATTATTTTATGATTCGAAGTGAATTAAAGAAAAAGGCCCAAGCTCATTTACATGGACATTACGGGAACTGGAGTTTAATCGCAATTCTTCCATGTGTGGCATTATTTATCTATTTATTCTCTACAATTTTTTTGTTTCAATCGTCCGAGGGAGTTGTAGATCAATCAAATGACTATCGTTCTTGGCAAGATGAATACTCGGAAAAATCTAATCGATCTAACAATGAGTATCGAAATGGTTATGAAGACGGTTATTCGGATGGCTATGATGAAGGATTCGATGATGGTTTTTATGAAAATGATTCCTATGATTATGATGACGAAGATGAGTATACTGGGAAAAAACTAAATTCCCTCTCAACT # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACTCTGTTTAGAGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: F [matched GTCTCACTCTATTTAGAGTGAGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-3.80,-3.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 6595-7239 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLWD010000023.1 Enterococcus sp. DIV0869a scaffold1.23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 6595 33 100.0 33 ................................. AAATGGTACTTATTGGACTGGTTTAAGTAAGGT 6661 33 100.0 34 ................................. TTCCTCAACCCAATCCAGATCAGCTTGTGTCATT 6728 33 100.0 38 ................................. GGAGGTAGGGTCTAGTGGACTCTGCCTCTTTTTTAGGA 6799 33 100.0 36 ................................. CTGCTCGGGTTGAGTCCCAAAGAAAATCAGGCTAAG 6868 33 100.0 34 ................................. AGACTGCATTTCCAAACTAACTCATTAACCTATA 6935 33 100.0 35 ................................. ACTTTTTGCTGAAGGAGGGAAAGAAAATGGCTATT 7003 33 100.0 36 ................................. TAAGCAGGCTGAAATACTTGCTAAAGAACAGGTAGA 7072 33 100.0 36 ................................. ATTTTCAATCATTCCACTTGATTCGAGTTTCTTTAG 7141 33 100.0 35 ................................. TCTCATATCATGGCAAAATCTCTGCATGTATTGTG 7209 31 81.8 0 ..............C..-.A.T.A....-.... | ========== ====== ====== ====== ================================= ====================================== ================== 10 33 98.2 35 GTCTCACTCTTTATTGAGTGAGTGGATTGAAAT # Left flank : GATAAGGACTGGAACATTTGATCGGGAAAAATCTGGGTATGCAGTTGTAATGACAAATGCCCAAGCTGGTGAAAAAATCATGACGATCAGTGCTGTACATGCTGGTAAAACATTCATCGATATCTTAGGAAACAATCCAACCAAAGTGACTTTAGATGAAACAGGCGCAGGAAAATTTCCAGTAAACGGTGGAGAAGTTTCTGTTTATGTGAATGAAGAGATCGTGAGTAACTTAAGTAAAGAAATAGGCGAATAGTTTTTCATTAGTTCGTGACTTCTGTTGAAAGAATCATTATACTGGAATGTAATAGAGTAGGATTTGAGAAATTTCTGGAAGTTTGGTGCGAACCTCAAGTGAACATGAAATCACTGGGAGATCCGCACCAAATTTTAGACCTGAAATAGGGTTGAATCGGTGGTTTTTTAATTTTTTTCTCATTTTCAGAAAAGATTTAAAGTGGAAAGTGACAAATGTGTAAAGCATTTGGTTCTTTTTCACG # Right flank : TTTTGTAAATGTTCCTAAATACTCATTTTTTATGAGTCCTTAGGAGCATTTATTATTTTTTAACTGCATTTTATTTTTAGATAACAAATACCACTAAATCTTTTTACAGGTTATTCATCAAGGTTTGTTCAATCTGTTCAGCTTTTGTGTTTTTTTTGGTATAATGTATAAGATTGAAAAAAGAGAGAGGACGTTGATGATGGCACAAGAAAACGCCTTGATCCAAGGTATGAATCCGAGACAAAAAGAAGCCGTTCTACATACAGAAGGGCCTTTATTAGTTATGGCAGGTGCAGGTAGTGGGAAAACAAGAGTTTTAACTCACCGTATTGCCTATTTAATTCAAGAAAAAGATGTCAATCCATGGAATATTTTAGCAATCACATTTACCAATAAAGCCGCAAAAGAAATGAGAGAGCGGGTTGGAAAATTGATGGAAACTGGCGGAAACGATGTTTGGGTTTCTACGTTCCACTCAATGTGTGTGCGGATTTTACGTC # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACTCTTTATTGAGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.64%AT] # Reference repeat match prediction: F [matched GTCTCACTCTTTATTGAGTGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 38607-37965 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLWD010000011.1 Enterococcus sp. DIV0869a scaffold1.11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 38606 33 100.0 34 ................................. TTTGGTCAAAATTGCTTCTGTACCAATGTTTAAA 38539 33 100.0 36 ................................. AGTAATAGCTTCTAGTTCAGCATCGCGAACCTCACC 38470 33 100.0 34 ................................. CATTAATAGCATCTAAGGTGCCTGACACAGAAGT 38403 33 100.0 34 ................................. GCTTCTTAGAGATTGTAAAGCCTATATCGATGCT 38336 33 100.0 35 ................................. AATAAATCCACCTCGCTTTCGAAATAATTATACCA 38268 33 100.0 34 ................................. ACATTATCAAATCATCTACTCTATATTTAAAAAA 38201 33 100.0 35 ................................. CCTGCGCATTTTAACAGCATGTTAAGTATCTCGTG 38133 33 100.0 34 ................................. TGGATTATCGCTGACTCTAGATCAATACCATAAT 38066 33 100.0 36 ................................. GATCCCCAACCTCGAACTCGTCCAACTTACGTCCTT 37997 33 84.8 0 ...................C..ACAT....... | ========== ====== ====== ====== ================================= ==================================== ================== 10 33 98.5 35 GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Left flank : ATGGCTATCCGCCATTTTTATGGAAGTAGGTGAGAGGTATGTTAGTATTGATCACTTATGATGTAGCAACAAGTTCCAAAAATGGCACTCGTCGTTTGAGGAAAGTAGCAAAGAAATGTCAAGATTACGGGCAACGTGTCCAGAATTCTGTCTTTGAATGTGTTGTCGATGCGACAGAGTTGACGAAGTTGAAGAAAGAACTAGTTGATTTGATTGATGAAGAATTAGATAGTTTACGTATTTATCGATTAGGAAATAATTATCAAAATAAAGTGGAGCACATAGGAGCAAAGGAAAGCTTTGATGTAGAAGCTCCATTGATATTTTAAGTAGAAAAATTAAGTGCGAACCCTAAGTGCACATGAAATCGCTGGGAGACCCGCACCATAAATTAGCTGTTTTTTATCAATAAAAAGCTGTTTTTCTCATGTGAATTTAATTTTACAAATGATTTTTTGTTGGAATACAAAAATATGTCATGTATTTTTGTCATTTTCACA # Right flank : GCTAACTTCTTAAACTCAAAAGATGACCAAACGATGCCTAACCATGTATAGATGTTGTGAGCGTAGCGTGGCTCACCCAGTATAACCTCCATCTAAATAAAACAACTAAAAGAAGACAACCAAGCACGTTAGCTTGGTTGTCTTCTTTTTTGTTTATTAAAAAAGCTTCAACAAAAGTAGAACTAGAAGTTATATTTTTAAAAGGTATAATAGAGTGACACGGTGTCATTAATGTTCGTGTGTCAATCTAGTCATTTTACTCACTTATCTAAACTACACATAATCCTTAAACAAAAAAAGACCTAAAAAGTAAGTCCCCGTGATATCTATAGATAACTCAAATAATATACAAACCTACACATCAGAACGAATAAATAAAAAAAGGATCTGAAAAGGTTTTTTTTAGAAGAAAATTATTTTATTTATGTTATTTAAAATAATTTTTTCTTGTTATATTAACAAACAAGAAAATCATTGAAATAATGTTTTTTCCAAGCTCT # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: R [matched GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //