Array 1 106588-107958 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAXT01000010.1 Rhodobacter aestuarii strain JA296 Ga0191648_110, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 106588 29 100.0 32 ............................. CGCTGCTAGCCCATTCATCGAAACATTGAGCC 106649 29 100.0 32 ............................. GCCGGATCGTGCGGAAAAAGGTTTCGTGGTTC 106710 29 100.0 32 ............................. CCGATGCCGTTTATCGTCAGGAAATGGCCGCT 106771 29 100.0 32 ............................. AATACCTTGGTTGCCATGGGTGCAGTTTTGCA 106832 29 100.0 32 ............................. ACGGCGTGACCGCTCAACTGCTGACAACGGCT 106893 29 100.0 32 ............................. AACGCAGCGTTGGCAATCACCGCCTCATATTG 106954 29 100.0 32 ............................. GTGCTGCATTGCTTTCTTGCTGGTGGTGATAT 107015 29 100.0 32 ............................. CCGCTCGCCATTGATGACGGAACGCTGGTTAG 107076 29 100.0 32 ............................. GGTTACTATGTGACAATGCCATCGCTTGTTTC 107137 29 100.0 32 ............................. CCGATGGGCTGCGCGTTTGGGAAGATCGCGAG 107198 29 100.0 32 ............................. CAGGCCCGTGCTCTACTTACATATGGAGGGGA 107259 29 100.0 32 ............................. ATGCTTGGCGGCCCGGCCTATCTGGCGCGCAT 107320 29 100.0 32 ............................. CGCGGGTTGCATATTAGTAAGTCCCCCGCCTT 107381 29 100.0 32 ............................. GGCCGGAAATTCAGCGCAAAATCCGTCAGGCC 107442 29 100.0 32 ............................. GAATTTCGCATGAAAAACTGGACCAAAGCTGC 107503 29 100.0 32 ............................. GACGGAATATTCCGCAGGCAAGCGCGAAAGGT 107564 29 100.0 32 ............................. CGGTAACGGCGGCGCTGATCCGACTGGCGACG 107625 29 100.0 32 ............................. CTCCTGCACCGCGCCAAGCGTGAGCCCGACAA 107686 29 100.0 32 ............................. CCGCTCATTTCCAAAGCCCCCCATTGTTGACC 107747 29 100.0 32 ............................. CCAAATTTCTCTGACGCTTCGCGAGCGCCTTC 107808 29 100.0 32 ............................. GCAGAGAAAGCCAACGCCGCCGCGCGGATTGT 107869 29 100.0 32 ............................. TCGGTGATAGCACCACCACCCTTGAGAAGTTG 107930 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 23 29 100.0 32 CTGTTCCCCGCCCACGCGGGGATGAACCG # Left flank : GCTCTTGGGGCGCATTATTCCCGCGATTGAAGAGGTGCTGTCCGCGGGGGACTTACCACGCCCCGAGCCCCCGCCCGAAGCCATGCCGGTCGCCTTTCCCAAGGGGCAATCGGGGGATGCAGGGCATCGCGGATGATTGTGGTGGTGGTCTCGAACGCGCCCCCAAGGTTGCGCGGGCGTTTGGCGGCTTGGCTCGTTGAGGTCCGTGCCGGTGTCTATGTTGGCGATTATTCCGCCAAGACCCGCGAAATGATCTGGGATCAGGTTTTGACAGGGCTTGATCAGGGGGATGCGGTGATGGTCTGGAAAGCGCCAACAGATCAGGGCTATGATTTTCGAACTGCGGGCACGAACCGTCGGGTGCCCGTGGATTTTGACGGTTTGAAACTGGTGAGTTTCAGGCCCGAAAAACCCCGTTAAGGCGAGGGGAAAGCCGCTCCAAAATCGGTAGGCTCTTTGACATTGTGAAAAACTTGGTAGATCAAGCGTCTACAGGAAGA # Right flank : CGTGCGATCCTGCTTGCACTCACCACGGCAGGCTGTTCCCCGCCCCTCACGTTGGTCTTGGCCTTACCAACGTGCTCGGCCCAAAGCAGTCGATCGCGCCCCGCAGTGCTTTTTCGCGAAGCATCCGCTCAGGCAATGCGGAGCGATAGGCGCTCGCAGTCCAAAATGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCCCACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCCTACGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //